Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:13 (3347540): wrapper (7.7.26015): starting
02:01:13 (3347540): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 02:01:13] Arguments: --nthreads 8
[2025-12-17 02:01:13] Threads: 8
[2025-12-17 02:01:13] Checking for CVMFS
[2025-12-17 02:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 02:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 02:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 02:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 02:01:15] 2.13.3.0 11830 59828 415236 154102 0 811 24316352 32935936 26067 16776704 0 321657152 99.497 410731561 32592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 02:01:15] CVMFS is ok
[2025-12-17 02:01:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 02:01:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 02:01:15] Further information can be found at the LHC@home message board.
[2025-12-17 02:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 02:01:15] Checking for apptainer binary...
[2025-12-17 02:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 02:01:15] Running /usr/bin/apptainer --version
[2025-12-17 02:01:15] apptainer version 1.4.5-2.el9
[2025-12-17 02:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 02:01:16] c6-8-25-1.aglt2.org
[2025-12-17 02:01:16] apptainer works
[2025-12-17 02:01:16] Set ATHENA_PROC_NUMBER=8
[2025-12-17 02:01:16] Set ATHENA_CORE_NUMBER=8
[2025-12-17 02:01:16] Starting ATLAS job with PandaID=6933463625
[2025-12-17 02:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:34:06]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:34:06] 2025-12-17 11:33:20,959 | INFO     | monitor loop #947: job 0:6933463625 is in state 'finished'
[2025-12-17 06:34:06] 2025-12-17 11:33:20,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:34:06] 2025-12-17 11:33:21,562 | INFO     | time since job start (16264s) is within the limit (174528.0s)
[2025-12-17 06:34:06] 2025-12-17 11:33:23,464 | INFO     | monitor loop #948: job 0:6933463625 is in state 'finished'
[2025-12-17 06:34:06] 2025-12-17 11:33:23,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:34:06] 2025-12-17 11:33:23,569 | INFO     | time since job start (16266s) is within the limit (174528.0s)
[2025-12-17 06:34:06] 2025-12-17 11:33:24,985 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 06:34:06] 2025-12-17 11:33:25,058 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2541.6740729166654
[2025-12-17 06:34:06] 2025-12-17 11:33:25,203 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6933463625/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,204 | INFO     | extracted standard info from prmon json
[2025-12-17 06:34:06] 2025-12-17 11:33:25,204 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:34:06] 2025-12-17 11:33:25,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:34:06] 2025-12-17 11:33:25,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:34:06] 2025-12-17 11:33:25,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:34:06] 2025-12-17 11:33:25,213 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:34:06] 2025-12-17 11:33:25,214 | INFO     | sum of square deviations: 5705270725.965909
[2025-12-17 06:34:06] 2025-12-17 11:33:25,220 | INFO     | sum of deviations: 63642675119.09096
[2025-12-17 06:34:06] 2025-12-17 11:33:25,220 | INFO     | mean x: 1765963079.7613637
[2025-12-17 06:34:06] 2025-12-17 11:33:25,220 | INFO     | mean y: 2476434.303030303
[2025-12-17 06:34:06] 2025-12-17 11:33:25,221 | INFO     | intersect: -19696959395.454884
[2025-12-17 06:34:06] 2025-12-17 11:33:25,221 | INFO     | chi2: 3.485868031404825
[2025-12-17 06:34:06] 2025-12-17 11:33:25,221 | INFO     | sum of square deviations: 5387156758.687241
[2025-12-17 06:34:06] 2025-12-17 11:33:25,228 | INFO     | sum of deviations: 80192726005.28954
[2025-12-17 06:34:06] 2025-12-17 11:33:25,228 | INFO     | mean x: 1765962927.2509654
[2025-12-17 06:34:06] 2025-12-17 11:33:25,228 | INFO     | mean y: 2484238.8416988417
[2025-12-17 06:34:06] 2025-12-17 11:33:25,228 | INFO     | intersect: -26285479431.8211
[2025-12-17 06:34:06] 2025-12-17 11:33:25,228 | INFO     | chi2: 2.704784088753629
[2025-12-17 06:34:06] 2025-12-17 11:33:25,229 | INFO     | current chi2=2.704784088753629 (change=22.407157574935923 %)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,229 | INFO     | right removable region: 258
[2025-12-17 06:34:06] 2025-12-17 11:33:25,229 | INFO     | sum of square deviations: 5387210561.667997
[2025-12-17 06:34:06] 2025-12-17 11:33:25,235 | INFO     | sum of deviations: 2524403219.065624
[2025-12-17 06:34:06] 2025-12-17 11:33:25,235 | INFO     | mean x: 1765963232.2586873
[2025-12-17 06:34:06] 2025-12-17 11:33:25,236 | INFO     | mean y: 2505602.193050193
[2025-12-17 06:34:06] 2025-12-17 11:33:25,236 | INFO     | intersect: -825010459.6415684
[2025-12-17 06:34:06] 2025-12-17 11:33:25,236 | INFO     | chi2: 1.1849577592556992
[2025-12-17 06:34:06] 2025-12-17 11:33:25,236 | INFO     | current chi2=1.1849577592556992 (change=66.00680953552465 %)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,237 | INFO     | sum of square deviations: 5081165783.8267565
[2025-12-17 06:34:06] 2025-12-17 11:33:25,242 | INFO     | sum of deviations: -12992825284.629917
[2025-12-17 06:34:06] 2025-12-17 11:33:25,243 | INFO     | mean x: 1765963384.7637796
[2025-12-17 06:34:06] 2025-12-17 11:33:25,243 | INFO     | mean y: 2513318.822834646
[2025-12-17 06:34:06] 2025-12-17 11:33:25,243 | INFO     | intersect: 4518180528.564831
[2025-12-17 06:34:06] 2025-12-17 11:33:25,243 | INFO     | chi2: 1.053334848746269
[2025-12-17 06:34:06] 2025-12-17 11:33:25,243 | INFO     | current chi2=1.053334848746269 (change=11.107814559744792 %)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,244 | INFO     | left removable region: 20
[2025-12-17 06:34:06] 2025-12-17 11:33:25,244 | INFO     | sum of square deviations: 4180057430.8235307
[2025-12-17 06:34:06] 2025-12-17 11:33:25,246 | INFO     | sum of deviations: -19182834455.117645
[2025-12-17 06:34:06] 2025-12-17 11:33:25,246 | INFO     | mean x: 1765963506.764706
[2025-12-17 06:34:06] 2025-12-17 11:33:25,246 | INFO     | mean y: 2535171.1050420166
[2025-12-17 06:34:06] 2025-12-17 11:33:25,246 | INFO     | intersect: 8106774446.4425335
[2025-12-17 06:34:06] 2025-12-17 11:33:25,251 | INFO     | chi2: 0.058768198465045204
[2025-12-17 06:34:06] 2025-12-17 11:33:25,251 | INFO     | current memory leak: -4.59 B/s (using 238 data points, chi2=0.06)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,251 | INFO     | could have reported an average CPU frequency of 2556 MHz (12 samples)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | ..............................
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . Timing measurements:
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . get job = 0 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . initial setup = 5 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . payload setup = 34 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . stage-in = 0 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . payload execution = 16126 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . stage-out = 4 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | . log creation = 1 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,252 | INFO     | ..............................
[2025-12-17 06:34:06] 2025-12-17 11:33:25,547 | INFO     | 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | job summary report
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | --------------------------------------------------
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | PanDA job id: 6933463625
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | task id: 47899042
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | errors: (none)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | pilot state: finished 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | transexitcode: 0
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | exeerrorcode: 0
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | exeerrordiag: 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | exitcode: 0
[2025-12-17 06:34:06] 2025-12-17 11:33:25,548 | INFO     | exitmsg: OK
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | cpuconsumptiontime: 43144 s
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | nevents: 400
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | neventsw: 0
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | pid: 3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | pgrp: 3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | corecount: 8
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | event service: False
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | sizes: {0: 2283712, 1: 2283796, 2: 2283995, 3: 2283995, 13: 2284023, 24: 2284079, 25: 2284497, 35: 2284525, 16167: 2315636, 16172: 2324634, 16176: 2324690, 16208: 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | --------------------------------------------------
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | 
[2025-12-17 06:34:06] 2025-12-17 11:33:25,549 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 06:34:06] 2025-12-17 11:33:25,582 | INFO     | time since job start (16268s) is within the limit (174528.0s)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:34:06] 2025-12-17 11:33:25,886 | INFO     | job 6933463625 has completed (purged errors)
[2025-12-17 06:34:06] 2025-12-17 11:33:25,887 | INFO     | overall cleanup function is called
[2025-12-17 06:34:06] 2025-12-17 11:33:26,905 | INFO     | --- collectZombieJob: --- 10, [3369129]
[2025-12-17 06:34:06] 2025-12-17 11:33:26,905 | INFO     | zombie collector waiting for pid 3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:26,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:34:06] 2025-12-17 11:33:26,906 | INFO     | collected zombie processes
[2025-12-17 06:34:06] 2025-12-17 11:33:26,906 | INFO     | will attempt to kill all subprocesses of pid=3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:30,541 | INFO     | PID=3359937 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:34:06] 2025-12-17 11:33:30,541 | INFO     | .. there are 24 such processes running
[2025-12-17 06:34:06] 2025-12-17 11:33:30,628 | INFO     | process IDs to be killed: [3369129] (in reverse order)
[2025-12-17 06:34:06] 2025-12-17 11:33:31,047 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:34:06] 2025-12-17 11:33:31,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:34:06] 2025-12-17 11:33:31,102 | INFO     | did not find any defunct processes belonging to 3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:31,200 | INFO     | did not find any defunct processes belonging to 3369129
[2025-12-17 06:34:06] 2025-12-17 11:33:31,201 | INFO     | ready for new job
[2025-12-17 06:34:06] 2025-12-17 11:33:31,201 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:34:06] 2025-12-17 11:33:31,203 | INFO     | ***************************************
[2025-12-17 06:34:06] 2025-12-17 11:33:31,203 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:34:06] 2025-12-17 11:33:31,203 | INFO     | ***************************************
[2025-12-17 06:34:06] 2025-12-17 11:33:31,203 | INFO     | 
[2025-12-17 06:34:06] 2025-12-17 11:33:31,209 | INFO     | architecture information:
[2025-12-17 06:34:06] 2025-12-17 11:33:31,210 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:34:06] 2025-12-17 11:33:31,263 | INFO     | cat /etc/os-release:
[2025-12-17 06:34:06] NAME="CentOS Linux"
[2025-12-17 06:34:06] VERSION="7 (Core)"
[2025-12-17 06:34:06] ID="centos"
[2025-12-17 06:34:06] ID_LIKE="rhel fedora"
[2025-12-17 06:34:06] VERSION_ID="7"
[2025-12-17 06:34:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:34:06] ANSI_COLOR="0;31"
[2025-12-17 06:34:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:34:06] HOME_URL="https://www.centos.org/"
[2025-12-17 06:34:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:34:06] 
[2025-12-17 06:34:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:34:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:34:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:34:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:34:06] 
[2025-12-17 06:34:06] 2025-12-17 11:33:31,263 | INFO     | ***************************************
[2025-12-17 06:34:06] 2025-12-17 11:33:31,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 06:34:06] 2025-12-17 11:33:31,824 | INFO     | sufficient remaining disk space (74403807232 B)
[2025-12-17 06:34:06] 2025-12-17 11:33:31,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:34:06] 2025-12-17 11:33:31,824 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:34:06] 2025-12-17 11:33:31,824 | INFO     | update_server=False
[2025-12-17 06:34:06] 2025-12-17 11:33:31,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:34:06] 2025-12-17 11:33:31,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:34:06] 2025-12-17 11:33:31,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:34:06] 2025-12-17 11:33:32,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:34:06] 2025-12-17 11:33:32,176 | INFO     | aborting loop
[2025-12-17 06:34:06] 2025-12-17 11:33:32,364 | INFO     | all data control threads have been joined
[2025-12-17 06:34:06] 2025-12-17 11:33:32,485 | INFO     | all payload control threads have been joined
[2025-12-17 06:34:06] 2025-12-17 11:33:32,830 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,184 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,378 | INFO     | [data] control thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,490 | INFO     | [payload] control thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,497 | INFO     | all job control threads have been joined
[2025-12-17 06:34:06] 2025-12-17 11:33:33,532 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,624 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,805 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:33,842 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,084 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,085 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,085 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,339 | INFO     | [job] validate thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,502 | INFO     | [job] control thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:34,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:34:06] 2025-12-17 11:33:35,792 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:35,834 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:34:06] 2025-12-17 11:33:46,157 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:34:06] 2025-12-17 11:33:46,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299297093440)>', '<ExcThread(monitor, started 140298638313216)>']
[2025-12-17 06:34:06] 2025-12-17 11:33:51,464 | INFO     | all workflow threads have been joined
[2025-12-17 06:34:06] 2025-12-17 11:33:51,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:34:06] 2025-12-17 11:33:51,465 | INFO     | traces error code: 0
[2025-12-17 06:34:06] 2025-12-17 11:33:51,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:34:06] 2025-12-17 11:34:04,932 | INFO     | PID=3359937 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:34:06] 2025-12-17 11:34:04,932 | INFO     | .. there are 24 such processes running
[2025-12-17 06:34:06] 2025-12-17 11:34:04,932 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:34:06] 2025-12-17 11:34:04,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:34:06] 2025-12-17 11:34:04,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:34:06] 2025-12-17 11:34:04,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:34:06] 2025-12-17 11:34:04,933 | INFO     | [monitor] control thread has ended
[2025-12-17 06:34:06] 2025-12-17 11:34:05,782 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:34:06] 2025-12-17 11:34:05,785 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:34:06] 2025-12-17 11:34:05,788 [wrapper] pilotpid: 3359937
[2025-12-17 06:34:06] 2025-12-17 11:34:05,790 [wrapper] Pilot exit status: 0
[2025-12-17 06:34:06] 2025-12-17 11:34:05,849 [wrapper] pandaids: 6933463625
[2025-12-17 06:34:06] 2025-12-17 11:34:05,957 [wrapper] cleanup supervisor_pilot 4155761 3359938
[2025-12-17 06:34:06] 2025-12-17 11:34:05,960 [wrapper] Test setup, not cleaning
[2025-12-17 06:34:06] 2025-12-17 11:34:05,964 [wrapper] apfmon messages muted
[2025-12-17 06:34:06] 2025-12-17 11:34:05,966 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:34:06] 2025-12-17 11:34:05,969 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:34:06]  *** Error codes and diagnostics ***
[2025-12-17 06:34:06]     "exeErrorCode": 0,
[2025-12-17 06:34:06]     "exeErrorDiag": "",
[2025-12-17 06:34:06]     "pilotErrorCode": 0,
[2025-12-17 06:34:06]     "pilotErrorDiag": "",
[2025-12-17 06:34:06]  *** Listing of results directory ***
[2025-12-17 06:34:06] total 378640
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-17 06:34:06] -rwx------. 1 boincer umatlas     36322 Dec 16 15:08 runpilot2-wrapper.sh
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 15:08 queuedata.json
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas       100 Dec 17 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:34:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 02:01 run_atlas
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas       105 Dec 17 02:01 job.xml
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas 195382897 Dec 17 02:01 EVNT.47899040._000148.pool.root.1
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 02:01 start_atlas.sh
[2025-12-17 06:34:06] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 02:01 shared
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas    592393 Dec 17 02:01 input.tar.gz
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas         0 Dec 17 02:01 boinc_lockfile
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas      2495 Dec 17 02:01 pandaJob.out
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas        57 Dec 17 02:01 setup.sh.local
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas    987409 Dec 17 02:02 agis_schedconf.cvmfs.json
[2025-12-17 06:34:06] drwx------. 5 boincer umatlas      4096 Dec 17 02:02 pilot3
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas      6877 Dec 17 06:29 init_data.xml
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas 183533697 Dec 17 06:31 HITS.47899042._003846.pool.root.1
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas       531 Dec 17 06:31 boinc_task_state.xml
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas      1044 Dec 17 06:32 memory_monitor_summary.json
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas   1516240 Dec 17 06:32 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas    465933 Dec 17 06:32 log.47899042._003846.job.log.tgz.1
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas        95 Dec 17 06:33 pilot_heartbeat.json
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas      7826 Dec 17 06:33 heartbeat.json
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas        28 Dec 17 06:34 wrapper_checkpoint.txt
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 06:34 boinc_mmap_file
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas       823 Dec 17 06:34 pilotlog.txt
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas   1981125 Dec 17 06:34 log.47899042._003846.job.log.1
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas       357 Dec 17 06:34 output.list
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas       620 Dec 17 06:34 runtime_log
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas   2467840 Dec 17 06:34 result.tar.gz
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 06:34 runtime_log.err
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas       656 Dec 17 06:34 nLRKDmFWqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9BWKDmcnDCTn.diag
[2025-12-17 06:34:06] -rw-r--r--. 1 boincer umatlas     21521 Dec 17 06:34 stderr.txt
[2025-12-17 06:34:06] HITS file was successfully produced:
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas 183533697 Dec 17 06:31 shared/HITS.pool.root.1
[2025-12-17 06:34:06]  *** Contents of shared directory: ***
[2025-12-17 06:34:06] total 373056
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas 195382897 Dec 17 02:01 ATLAS.root_0
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 02:01 start_atlas.sh
[2025-12-17 06:34:06] -rw-r--r--. 2 boincer umatlas    592393 Dec 17 02:01 input.tar.gz
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas 183533697 Dec 17 06:31 HITS.pool.root.1
[2025-12-17 06:34:06] -rw-------. 1 boincer umatlas   2467840 Dec 17 06:34 result.tar.gz
06:34:07 (3347540): run_atlas exited; CPU time 43914.121220
06:34:07 (3347540): called boinc_finish(0)

</stderr_txt>
]]>

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