Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:38:09 (1569342): wrapper (7.7.26015): starting
13:38:09 (1569342): wrapper: running run_atlas (--nthreads 2)
[2025-12-17 13:38:09] Arguments: --nthreads 2
[2025-12-17 13:38:09] Threads: 2
[2025-12-17 13:38:09] Checking for CVMFS
[2025-12-17 13:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:38:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:38:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:38:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:38:09] 2.9.2.0 357904 6207 64432 154111 2 57 27990380 36864000 0 130560 0 3191356 99.987 226844 16838 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 13:38:09] CVMFS is ok
[2025-12-17 13:38:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:38:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:38:09] Further information can be found at the LHC@home message board.
[2025-12-17 13:38:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:38:09] Checking for apptainer binary...
[2025-12-17 13:38:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:38:09] Running /usr/bin/apptainer --version
[2025-12-17 13:38:09] apptainer version 1.4.1-1.1
[2025-12-17 13:38:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:38:09] atlasA229
[2025-12-17 13:38:09] apptainer works
[2025-12-17 13:38:09] Set ATHENA_PROC_NUMBER=2
[2025-12-17 13:38:09] Set ATHENA_CORE_NUMBER=2
[2025-12-17 13:38:09] Starting ATLAS job with PandaID=6933463026
[2025-12-17 13:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:36:52]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:36:52] 2025-12-17 14:36:23,543 | INFO     | all job control threads have been joined
[2025-12-17 15:36:52] 2025-12-17 14:36:23,582 | INFO     | [data] copytool_in thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:23,694 | INFO     | [job] validate thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:23,738 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:23,741 | INFO     | [data] control thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:23,892 | INFO     | [data] copytool_out thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:24,051 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:24,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:24,158 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:24,393 | INFO     | [payload] control thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:24,549 | INFO     | [job] control thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:25,946 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:32,041 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:36:52] 2025-12-17 14:36:33,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:36:52] 2025-12-17 14:36:33,901 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:36:52] 2025-12-17 14:36:35,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668076881728)>', '<ExcThread(monitor, started 140667711887104)>']
[2025-12-17 15:36:52] 2025-12-17 14:36:40,553 | INFO     | all workflow threads have been joined
[2025-12-17 15:36:52] 2025-12-17 14:36:40,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:36:52] 2025-12-17 14:36:40,555 | INFO     | traces error code: 0
[2025-12-17 15:36:52] 2025-12-17 14:36:40,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | INFO     | PID=1573051 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:36:52] 2025-12-17 14:36:52,761 | INFO     | [monitor] control thread has ended
[2025-12-17 15:36:52] 2025-12-17 14:36:52,801 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:36:52] 2025-12-17 14:36:52,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:36:52] 2025-12-17 14:36:52,806 [wrapper] pilotpid: 1573051
[2025-12-17 15:36:52] 2025-12-17 14:36:52,809 [wrapper] Pilot exit status: 0
[2025-12-17 15:36:52] 2025-12-17 14:36:52,815 [wrapper] pandaids: 6933463026
[2025-12-17 15:36:52] 2025-12-17 14:36:52,826 [wrapper] cleanup supervisor_pilot 1593291 1573052
[2025-12-17 15:36:52] 2025-12-17 14:36:52,829 [wrapper] Test setup, not cleaning
[2025-12-17 15:36:52] 2025-12-17 14:36:52,830 [wrapper] apfmon messages muted
[2025-12-17 15:36:52] 2025-12-17 14:36:52,833 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:36:52] 2025-12-17 14:36:52,835 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:36:52]  *** Error codes and diagnostics ***
[2025-12-17 15:36:52]     "exeErrorCode": 0,
[2025-12-17 15:36:52]     "exeErrorDiag": "",
[2025-12-17 15:36:52]     "pilotErrorCode": 0,
[2025-12-17 15:36:52]     "pilotErrorDiag": "",
[2025-12-17 15:36:52]  *** Listing of results directory ***
[2025-12-17 15:36:52] total 367332
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc    579449 Dec 16 21:04 pilot3.tar.gz
[2025-12-17 15:36:52] -rwx------ 1 boinc boinc     36322 Dec 16 21:07 runpilot2-wrapper.sh
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      5112 Dec 16 21:08 queuedata.json
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:36:52] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:38 run_atlas
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:38 job.xml
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc 196672541 Dec 17 13:38 EVNT.47899040._000134.pool.root.1
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc    592390 Dec 17 13:38 input.tar.gz
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:38 start_atlas.sh
[2025-12-17 15:36:52] drwxrwx--x 2 boinc boinc      4096 Dec 17 13:38 shared
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:38 boinc_setup_complete
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      6207 Dec 17 13:38 init_data.xml
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:38 boinc_lockfile
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      2495 Dec 17 13:38 pandaJob.out
[2025-12-17 15:36:52] -rw------- 1 boinc boinc    987423 Dec 17 13:38 agis_schedconf.cvmfs.json
[2025-12-17 15:36:52] -rw------- 1 boinc boinc   1516240 Dec 17 13:38 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:36:52] drwx------ 5 boinc boinc      4096 Dec 17 13:38 pilot3
[2025-12-17 15:36:52] -rw------- 1 boinc boinc 172995362 Dec 17 15:35 HITS.47899042._003505.pool.root.1
[2025-12-17 15:36:52] -rw------- 1 boinc boinc        95 Dec 17 15:35 pilot_heartbeat.json
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc       529 Dec 17 15:35 boinc_task_state.xml
[2025-12-17 15:36:52] -rw------- 1 boinc boinc      1013 Dec 17 15:36 memory_monitor_summary.json
[2025-12-17 15:36:52] -rw------- 1 boinc boinc    272906 Dec 17 15:36 log.47899042._003505.job.log.tgz.1
[2025-12-17 15:36:52] -rw------- 1 boinc boinc      7744 Dec 17 15:36 heartbeat.json
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      8192 Dec 17 15:36 boinc_mmap_file
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc        27 Dec 17 15:36 wrapper_checkpoint.txt
[2025-12-17 15:36:52] -rw------- 1 boinc boinc       747 Dec 17 15:36 pilotlog.txt
[2025-12-17 15:36:52] -rw------- 1 boinc boinc   1020222 Dec 17 15:36 log.47899042._003505.job.log.1
[2025-12-17 15:36:52] -rw------- 1 boinc boinc       357 Dec 17 15:36 output.list
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc       620 Dec 17 15:36 runtime_log
[2025-12-17 15:36:52] -rw------- 1 boinc boinc   1310720 Dec 17 15:36 result.tar.gz
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      8912 Dec 17 15:36 runtime_log.err
[2025-12-17 15:36:52] -rw------- 1 boinc boinc       662 Dec 17 15:36 oLeNDmvVqp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgfaKDmuEkzdn.diag
[2025-12-17 15:36:52] -rw-r--r-- 1 boinc boinc      6103 Dec 17 15:36 stderr.txt
[2025-12-17 15:36:52] HITS file was successfully produced:
[2025-12-17 15:36:52] -rw------- 1 boinc boinc 172995362 Dec 17 15:35 shared/HITS.pool.root.1
[2025-12-17 15:36:52]  *** Contents of shared directory: ***
[2025-12-17 15:36:52] total 362892
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc 196672541 Dec 17 13:38 ATLAS.root_0
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc    592390 Dec 17 13:38 input.tar.gz
[2025-12-17 15:36:52] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:38 start_atlas.sh
[2025-12-17 15:36:52] -rw------- 1 boinc boinc 172995362 Dec 17 15:35 HITS.pool.root.1
[2025-12-17 15:36:52] -rw------- 1 boinc boinc   1310720 Dec 17 15:36 result.tar.gz
15:36:54 (1569342): run_atlas exited; CPU time 13743.879725
15:36:54 (1569342): called boinc_finish(0)

</stderr_txt>
]]>

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