Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-17 10:31:18 (9516): vboxwrapper version 26210
2025-12-17 10:31:18 (9516): BOINC client version: 8.2.8
2025-12-17 10:31:19 (9516): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-12-17 10:31:19 (9516): Successfully copied 'init_data.xml' to the shared directory.
2025-12-17 10:31:19 (9516): Create VM. (boinc_7d8fa2cf827545d0, slot#3)
2025-12-17 10:31:20 (9516): Setting Memory Size for VM. (4000MB)
2025-12-17 10:31:20 (9516): Setting CPU Count for VM. (4)
2025-12-17 10:31:20 (9516): Setting Chipset Options for VM.
2025-12-17 10:31:21 (9516): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-17 10:31:21 (9516): Setting Boot Options for VM.
2025-12-17 10:31:21 (9516): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-17 10:31:22 (9516): Enabling VM Network Access.
2025-12-17 10:31:22 (9516): Disabling USB Support for VM.
2025-12-17 10:31:22 (9516): Disabling COM Port Support for VM.
2025-12-17 10:31:22 (9516): Disabling LPT Port Support for VM.
2025-12-17 10:31:23 (9516): Disabling Audio Support for VM.
2025-12-17 10:31:23 (9516): Disabling Clipboard Support for VM.
2025-12-17 10:31:23 (9516): Disabling Drag and Drop Support for VM.
2025-12-17 10:31:23 (9516): Adding storage controller(s) to VM.
2025-12-17 10:31:24 (9516): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-17 10:31:26 (9516): Adding VirtualBox Guest Additions to VM.
2025-12-17 10:31:26 (9516): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-17 10:31:26 (9516): forwarding host port 54829 to guest port 80
2025-12-17 10:31:26 (9516): Enabling remote desktop for VM.
2025-12-17 10:31:27 (9516): Enabling shared directory for VM.
2025-12-17 10:31:28 (9516): Starting VM using VBoxManage interface. (boinc_7d8fa2cf827545d0, slot#3)
2025-12-17 10:31:32 (9516): Successfully started VM. (PID = '22132')
2025-12-17 10:31:32 (9516): Reporting VM Process ID to BOINC.
2025-12-17 10:31:32 (9516): Guest Log: BIOS: VirtualBox 7.1.12
2025-12-17 10:31:32 (9516): Guest Log: CPUID EDX: 0x178bfbff
2025-12-17 10:31:32 (9516): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-17 10:31:32 (9516): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-17 10:31:32 (9516): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-17 10:31:32 (9516): Detected: Web Application Enabled (http://localhost:54829)
2025-12-17 10:31:32 (9516): Detected: Remote Desktop Enabled (localhost:54830)
2025-12-17 10:31:32 (9516): Preference change detected
2025-12-17 10:31:32 (9516): Setting CPU throttle for VM. (100%)
2025-12-17 10:31:32 (9516): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 480 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-17 10:31:34 (9516): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-17 10:31:34 (9516): Guest Log: BIOS: Booting from Hard Disk...
2025-12-17 10:31:37 (9516): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-17 10:31:37 (9516): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-17 10:31:37 (9516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-17 10:31:42 (9516): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-17 10:31:42 (9516): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-17 10:31:46 (9516): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000076 main     Log opened 2025-12-17T10:31:44.525938000Z
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000142 main     OS Product: Linux
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000157 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000168 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000180 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000180 main     Process ID: 1299
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000180 main     Package type: LINUX_64BITS_GENERIC
2025-12-17 10:31:46 (9516): Guest Log: 00:00:00.000670 main     5.2.32 r132073 started. Verbose level = 0
2025-12-17 10:31:46 (9516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-17 10:31:46 (9516): Guest Log: [INFO] Mounting shared directory
2025-12-17 10:31:46 (9516): Guest Log: [INFO] Checking for init_data.xml
2025-12-17 10:31:50 (9516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-17 10:31:50 (9516): Guest Log: [INFO] Detected branch: prod
2025-12-17 10:31:50 (9516): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-17 10:31:50 (9516): Guest Log: Copying input files
2025-12-17 10:31:50 (9516): Guest Log: Copied input files into RunAtlas.
2025-12-17 10:31:50 (9516): Guest Log: Detected user-configured HTTP proxy at http://milly:3128 - will set in /etc/cvmfs/default.local
2025-12-17 10:33:10 (9516): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-17 10:33:10 (9516): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-17 10:33:10 (9516): Guest Log: 2.6.3.0 1572 1 29596 154109 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.20:3128 1
2025-12-17 10:33:11 (9516): Guest Log: copied the webapp to /var/www
2025-12-17 10:33:11 (9516): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-17 10:33:11 (9516): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-17 10:33:11 (9516): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-17 10:33:11 (9516): Guest Log:  *** Starting ATLAS job. (PandaID=6931012495 taskID=47886933) ***
2025-12-17 11:45:04 (9516): VM state change detected. (old = 'running', new = 'paused')
2025-12-17 13:30:03 (9516): VM state change detected. (old = 'paused', new = 'running')
2025-12-17 13:30:06 (9516): Guest Log: 01:13:20.990451 timesync vgsvcTimeSyncWorker: Radical host time change: 6 309 066 000 000ns (HostNow=1 765 978 205 448 000 000 ns HostLast=1 765 971 896 382 000 000 ns)
2025-12-17 13:30:16 (9516): Guest Log: 01:13:31.011634 timesync vgsvcTimeSyncWorker: Radical guest time change: 6 309 955 320 000ns (GuestNow=1 765 978 215 470 278 000 ns GuestLast=1 765 971 905 514 958 000 ns fSetTimeLastLoop=true )
2025-12-17 13:32:09 (9516): Guest Log:  *** Job finished ***
2025-12-17 13:32:09 (9516): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:31:43,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:31:43,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:02,579 | INFO     | [monitor] cgroup control has ended
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:02,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094378379072)>', '<ExcThread(monitor, started 140093545232128)>']
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:03,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:03,462 | INFO     | [monitor] control thread has ended
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,927 | INFO     | all workflow threads have been joined
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,927 | INFO     | end of generic workflow (traces error code: 0)
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,927 | INFO     | traces error code: 0
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,969 [wrapper] ==== pilot stdout END ====
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,975 [wrapper] ==== wrapper stdout RESUME ====
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,977 [wrapper] pilotpid: 6109
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:07,980 [wrapper] Pilot exit status: 0
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,156 [wrapper] pandaids: 6931012495
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,179 [wrapper] cleanup supervisor_pilot 31628 6110
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,183 [wrapper] Test setup, not cleaning
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,197 [wrapper] apfmon messages muted
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,211 [wrapper] ==== wrapper stdout END ====
2025-12-17 13:32:09 (9516): Guest Log: 2025-12-17 13:32:08,213 [wrapper] ==== wrapper stderr END ====
2025-12-17 13:32:09 (9516): Guest Log:  *** Error codes and diagnostics ***
2025-12-17 13:32:09 (9516): Guest Log:     "exeErrorCode": 0,
2025-12-17 13:32:09 (9516): Guest Log:     "exeErrorDiag": "",
2025-12-17 13:32:09 (9516): Guest Log:     "pilotErrorCode": 0,
2025-12-17 13:32:09 (9516): Guest Log:     "pilotErrorDiag": "",
2025-12-17 13:32:09 (9516): Guest Log:  *** Listing of results directory ***
2025-12-17 13:32:09 (9516): Guest Log: total 144248
2025-12-17 13:32:09 (9516): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 16 09:01 pilot3.tar.gz
2025-12-17 13:32:09 (9516): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 16 09:01 runpilot2-wrapper.sh
2025-12-17 13:32:09 (9516): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 16 09:02 queuedata.json
2025-12-17 13:32:09 (9516): Guest Log: -rwxr-xr-x. 1 atlas atlas      9134 Dec 17 10:31 init_data.xml
2025-12-17 13:32:09 (9516): Guest Log: -rwxr-xr-x. 1 atlas atlas    592397 Dec 17 10:31 input.tar.gz
2025-12-17 13:32:09 (9516): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 17 10:31 start_atlas.sh
2025-12-17 13:32:09 (9516): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 17 10:31 EVNT.47886929._000256.pool.root.1 -> /data/./ATLAS.root_0
2025-12-17 13:32:09 (9516): Guest Log: -rw-r--r--. 1 atlas atlas      2513 Dec 17 10:33 pandaJob.out
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas        42 Dec 17 10:36 setup.sh.local
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas    987423 Dec 17 10:40 agis_schedconf.cvmfs.json
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 17 10:40 agis_ddmendpoints.agis.ALL.json
2025-12-17 13:32:09 (9516): Guest Log: drwx------. 5 atlas atlas      4096 Dec 17 10:40 pilot3
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas 142224907 Dec 17 11:44 HITS.47886933._006619.pool.root.1
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas      1041 Dec 17 11:44 memory_monitor_summary.json
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas    255119 Dec 17 11:44 log.47886933._006619.job.log.tgz.1
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas        97 Dec 17 13:31 pilot_heartbeat.json
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas      7779 Dec 17 13:31 heartbeat.json
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas      4877 Dec 17 13:32 pilotlog.txt
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas    564123 Dec 17 13:32 log.47886933._006619.job.log.1
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas       357 Dec 17 13:32 output.list
2025-12-17 13:32:09 (9516): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 17 13:32 runtime_log
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas    839680 Dec 17 13:32 result.tar.gz
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas       665 Dec 17 13:32 V9pKDmI7fp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDminZKDmBcF47m.diag
2025-12-17 13:32:09 (9516): Guest Log: -rw-r--r--. 1 atlas atlas      9219 Dec 17 13:32 runtime_log.err
2025-12-17 13:32:09 (9516): Guest Log: Looking for outputfile HITS.47886933._006619.pool.root.1
2025-12-17 13:32:09 (9516): Guest Log: HITS file was successfully produced
2025-12-17 13:32:09 (9516): Guest Log: -rw-------. 1 atlas atlas 142224907 Dec 17 11:44 /home/atlas/RunAtlas/HITS.47886933._006619.pool.root.1
2025-12-17 13:32:09 (9516): Guest Log: Successfully finished the ATLAS job!
2025-12-17 13:32:09 (9516): Guest Log: Copying the results back to the shared directory!
2025-12-17 13:32:09 (9516): Guest Log:  *** Contents of shared directory: ***
2025-12-17 13:32:09 (9516): Guest Log: total 329064
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root 193272291 Dec 17 10:31 ATLAS.root_0
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root 142224907 Dec 17 13:32 HITS.pool.root.1
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root      9134 Dec 17 10:31 init_data.xml
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root    592397 Dec 17 06:23 input.tar.gz
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root    839680 Dec 17 13:32 result.tar.gz
2025-12-17 13:32:09 (9516): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 17 06:23 start_atlas.sh
2025-12-17 13:32:09 (9516): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-17 13:32:09 (9516): VM Completion File Detected.
2025-12-17 13:32:09 (9516): Powering off VM.
2025-12-17 13:32:09 (9516): Successfully stopped VM.
2025-12-17 13:32:09 (9516): Deregistering VM. (boinc_7d8fa2cf827545d0, slot#3)
2025-12-17 13:32:09 (9516): Removing network bandwidth throttle group from VM.
2025-12-17 13:32:10 (9516): Removing VM from VirtualBox.
2025-12-17 13:32:15 (9516): called boinc_finish(0)

</stderr_txt>
]]>

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