Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:41 (1965857): wrapper (7.7.26015): starting
22:23:41 (1965857): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 22:23:41] Arguments: --nthreads 12
[2025-12-16 22:23:41] Threads: 12
[2025-12-16 22:23:41] Checking for CVMFS
[2025-12-16 22:23:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 22:23:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 22:23:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 22:23:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 22:23:42] 2.11.5.0 143847 57931 400160 154102 0 527 25891230 45568001 14194 130560 0 470380126 99.778 319748883 22654 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-12-16 22:23:42] CVMFS is ok
[2025-12-16 22:23:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 22:23:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 22:23:42] Further information can be found at the LHC@home message board.
[2025-12-16 22:23:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 22:23:42] Checking for apptainer binary...
[2025-12-16 22:23:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 22:23:42] Running /usr/bin/apptainer --version
[2025-12-16 22:23:42] apptainer version 1.4.1-1.el9
[2025-12-16 22:23:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 22:23:42] wns0057.triumf.lcg
[2025-12-16 22:23:42] apptainer works
[2025-12-16 22:23:42] Set ATHENA_PROC_NUMBER=12
[2025-12-16 22:23:42] Set ATHENA_CORE_NUMBER=12
[2025-12-16 22:23:42] Starting ATLAS job with PandaID=6931736713
[2025-12-16 22:23:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:28:11]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | wrong length of table data, x=[1765952704.0], y=[770.0] (must be same and length>=4)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . Timing measurements:
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . get job = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . initial setup = 2 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload setup = 19 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-in = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload execution = 37 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-out = 1 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . log creation = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931736713/pilotlog.txt
[2025-12-16 22:28:11] 2025-12-17 06:27:39,423 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 22:28:11] - Log from pilotlog.txt -
[2025-12-16 22:28:11] 2025-12-17 06:27:39,408 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931736713/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | INFO     | extracted standard info from prmon json
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | wrong length of table data, x=[1765952704.0], y=[770.0] (must be same and length>=4)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . Timing measurements:
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . get job = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . initial setup = 2 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload setup = 19 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-in = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload execution = 37 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-out = 1 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . log creation = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931736713/pilotlog.txt
[2025-12-16 22:28:11] 2025-12-17 06:27:39,423 | WARNING  | 
[2025-12-16 22:28:11] [begin log extracts]
[2025-12-16 22:28:11] - Log from pilotlog.txt -
[2025-12-16 22:28:11] 2025-12-17 06:27:39,408 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931736713/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | INFO     | extracted standard info from prmon json
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:28:11] 2025-12-17 06:27:39,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:28:11] 2025-12-17 06:27:39,410 | WARNING  | wrong length of table data, x=[1765952704.0], y=[770.0] (must be same and length>=4)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | could have reported an average CPU frequency of 2588 MHz (4 samples)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . Timing measurements:
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . get job = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . initial setup = 2 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload setup = 19 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-in = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . payload execution = 37 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . stage-out = 1 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | . log creation = 0 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | ..............................
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 22:28:11] 2025-12-17 06:27:39,411 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931736713/pilotlog.txt
[2025-12-16 22:28:11] [end log extracts]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,423 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,424 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | 
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | job summary report
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | --------------------------------------------------
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | PanDA job id: 6931736713
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | task id: 47898836
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 22:25:18,201 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | pilot state: failed 
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | transexitcode: 65
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | exeerrorcode: 65
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | exitcode: 65
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | cpuconsumptiontime: 17 s
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | nevents: 0
[2025-12-16 22:28:11] 2025-12-17 06:27:39,545 | INFO     | neventsw: 0
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | pid: 1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | pgrp: 1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | corecount: 12
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | event service: False
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | sizes: {0: 2283780, 1: 2284035, 7: 2284297, 11: 2284325, 60: 2307696, 63: 2311988, 65: 2312144, 192: 2312310}
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | --------------------------------------------------
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | 
[2025-12-16 22:28:11] 2025-12-17 06:27:39,546 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | job 6931736713 has completed (purged errors)
[2025-12-16 22:28:11] 2025-12-17 06:27:39,563 | INFO     | overall cleanup function is called
[2025-12-16 22:28:11] 2025-12-17 06:27:40,570 | INFO     | --- collectZombieJob: --- 10, [1979638]
[2025-12-16 22:28:11] 2025-12-17 06:27:40,571 | INFO     | zombie collector waiting for pid 1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:40,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:28:11] 2025-12-17 06:27:40,571 | INFO     | collected zombie processes
[2025-12-16 22:28:11] 2025-12-17 06:27:40,571 | INFO     | will attempt to kill all subprocesses of pid=1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:40,887 | INFO     | process IDs to be killed: [1979638] (in reverse order)
[2025-12-16 22:28:11] 2025-12-17 06:27:40,957 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:28:11] 2025-12-17 06:27:40,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:28:11] 2025-12-17 06:27:40,974 | INFO     | did not find any defunct processes belonging to 1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:40,982 | INFO     | did not find any defunct processes belonging to 1979638
[2025-12-16 22:28:11] 2025-12-17 06:27:40,982 | INFO     | ready for new job
[2025-12-16 22:28:11] 2025-12-17 06:27:40,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:28:11] 2025-12-17 06:27:40,984 | INFO     | ***************************************
[2025-12-16 22:28:11] 2025-12-17 06:27:40,984 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:28:11] 2025-12-17 06:27:40,984 | INFO     | ***************************************
[2025-12-16 22:28:11] 2025-12-17 06:27:40,984 | INFO     | 
[2025-12-16 22:28:11] 2025-12-17 06:27:40,986 | INFO     | architecture information:
[2025-12-16 22:28:11] 2025-12-17 06:27:40,986 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:28:11] 2025-12-17 06:27:40,998 | INFO     | cat /etc/os-release:
[2025-12-16 22:28:11] NAME="CentOS Linux"
[2025-12-16 22:28:11] VERSION="7 (Core)"
[2025-12-16 22:28:11] ID="centos"
[2025-12-16 22:28:11] ID_LIKE="rhel fedora"
[2025-12-16 22:28:11] VERSION_ID="7"
[2025-12-16 22:28:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:28:11] ANSI_COLOR="0;31"
[2025-12-16 22:28:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:28:11] HOME_URL="https://www.centos.org/"
[2025-12-16 22:28:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:28:11] 
[2025-12-16 22:28:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:28:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:28:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:28:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:28:11] 
[2025-12-16 22:28:11] 2025-12-17 06:27:40,998 | INFO     | ***************************************
[2025-12-16 22:28:11] 2025-12-17 06:27:41,511 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 22:28:11] 2025-12-17 06:27:41,601 | INFO     | sufficient remaining disk space (2142427414528 B)
[2025-12-16 22:28:11] 2025-12-17 06:27:41,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:28:11] 2025-12-17 06:27:41,601 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:28:11] 2025-12-17 06:27:41,601 | INFO     | update_server=False
[2025-12-16 22:28:11] 2025-12-17 06:27:41,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:28:11] 2025-12-17 06:27:41,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:28:11] 2025-12-17 06:27:41,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:28:11] 2025-12-17 06:27:41,606 | INFO     | aborting loop
[2025-12-16 22:28:11] 2025-12-17 06:27:41,637 | INFO     | all data control threads have been joined
[2025-12-16 22:28:11] 2025-12-17 06:27:42,061 | INFO     | all payload control threads have been joined
[2025-12-16 22:28:11] 2025-12-17 06:27:42,260 | INFO     | all job control threads have been joined
[2025-12-16 22:28:11] 2025-12-17 06:27:42,608 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:42,612 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:42,644 | INFO     | [data] control thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,067 | INFO     | [payload] control thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,267 | INFO     | [job] control thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,399 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,439 | INFO     | [job] validate thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,455 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,455 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,570 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,611 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,945 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:43,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:28:11] 2025-12-17 06:27:44,072 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:44,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:28:11] 2025-12-17 06:27:45,519 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:47,987 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:28:11] 2025-12-17 06:27:54,084 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:28:11] 2025-12-17 06:27:54,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687291184960)>', '<ExcThread(monitor, started 139686085388032)>']
[2025-12-16 22:28:11] 2025-12-17 06:27:59,385 | INFO     | all workflow threads have been joined
[2025-12-16 22:28:11] 2025-12-17 06:27:59,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:28:11] 2025-12-17 06:27:59,385 | INFO     | traces error code: 0
[2025-12-16 22:28:11] 2025-12-17 06:27:59,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:28:11] 2025-12-17 06:28:11,633 | INFO     | PID=1969559 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:28:11] 2025-12-17 06:28:11,633 | INFO     | .. there are 28 such processes running
[2025-12-16 22:28:11] 2025-12-17 06:28:11,634 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:28:11] 2025-12-17 06:28:11,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:28:11] 2025-12-17 06:28:11,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:28:11] 2025-12-17 06:28:11,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:28:11] 2025-12-17 06:28:11,634 | INFO     | [monitor] control thread has ended
[2025-12-16 22:28:11] 2025-12-17 06:28:11,768 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:28:11] 2025-12-17 06:28:11,774 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:28:11] 2025-12-17 06:28:11,776 [wrapper] pilotpid: 1969559
[2025-12-16 22:28:11] 2025-12-17 06:28:11,778 [wrapper] Pilot exit status: 0
[2025-12-16 22:28:11] 2025-12-17 06:28:11,788 [wrapper] pandaids: 6931736713
[2025-12-16 22:28:11] 2025-12-17 06:28:11,830 [wrapper] cleanup supervisor_pilot 1969565 1969560
[2025-12-16 22:28:11] 2025-12-17 06:28:11,832 [wrapper] Test setup, not cleaning
[2025-12-16 22:28:11] 2025-12-17 06:28:11,834 [wrapper] apfmon messages muted
[2025-12-16 22:28:11] 2025-12-17 06:28:11,835 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:28:11] 2025-12-17 06:28:11,837 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:28:11]  *** Error codes and diagnostics ***
[2025-12-16 22:28:11]     "exeErrorCode": 65,
[2025-12-16 22:28:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 22:28:11]     "pilotErrorCode": 1305,
[2025-12-16 22:28:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 22:28:11]  *** Listing of results directory ***
[2025-12-16 22:28:11] total 212068
[2025-12-16 22:28:11] -rwx------. 1 boinc boinc     36322 Dec 16 17:09 runpilot2-wrapper.sh
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc    579449 Dec 16 17:11 pilot3.tar.gz
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc      5112 Dec 16 17:12 queuedata.json
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc       100 Dec 16 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:28:11] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 22:23 run_atlas
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc       105 Dec 16 22:23 job.xml
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc      6595 Dec 16 22:23 init_data.xml
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc 213021319 Dec 16 22:23 EVNT.47898833._000138.pool.root.1
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc     15847 Dec 16 22:23 start_atlas.sh
[2025-12-16 22:28:11] drwxrwx--x. 2 boinc boinc      4096 Dec 16 22:23 shared
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc    592408 Dec 16 22:23 input.tar.gz
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc         0 Dec 16 22:23 boinc_lockfile
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc      2552 Dec 16 22:23 pandaJob.out
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc    987409 Dec 16 22:23 agis_schedconf.cvmfs.json
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc   1516240 Dec 16 22:23 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:28:11] drwx------. 5 boinc boinc      4096 Dec 16 22:23 pilot3
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc       960 Dec 16 22:25 memory_monitor_summary.json
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc     21371 Dec 16 22:25 log.47898836._003555.job.log.tgz.1
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc      8391 Dec 16 22:27 heartbeat.json
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc       523 Dec 16 22:28 boinc_task_state.xml
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc        22 Dec 16 22:28 wrapper_checkpoint.txt
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc      8192 Dec 16 22:28 boinc_mmap_file
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc       823 Dec 16 22:28 pilotlog.txt
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc        95 Dec 16 22:28 pilot_heartbeat.json
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc     89942 Dec 16 22:28 log.47898836._003555.job.log.1
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc       188 Dec 16 22:28 output.list
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc       620 Dec 16 22:28 runtime_log
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc    133120 Dec 16 22:28 result.tar.gz
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc      8636 Dec 16 22:28 runtime_log.err
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc       644 Dec 16 22:28 A1HODm0Dvp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQDbKDmuA1Rbm.diag
[2025-12-16 22:28:11] -rw-r--r--. 1 boinc boinc     21788 Dec 16 22:28 stderr.txt
[2025-12-16 22:28:11] No HITS result produced
[2025-12-16 22:28:11]  *** Contents of shared directory: ***
[2025-12-16 22:28:11] total 208764
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc 213021319 Dec 16 22:23 ATLAS.root_0
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc     15847 Dec 16 22:23 start_atlas.sh
[2025-12-16 22:28:11] -rw-r--r--. 2 boinc boinc    592408 Dec 16 22:23 input.tar.gz
[2025-12-16 22:28:11] -rw-------. 1 boinc boinc    133120 Dec 16 22:28 result.tar.gz
22:28:13 (1965857): run_atlas exited; CPU time 25.349234
22:28:13 (1965857): called boinc_finish(0)

</stderr_txt>
]]>

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