Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:12:49 (20201): wrapper (7.7.26015): starting
01:12:49 (20201): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 01:12:49] Arguments: --nthreads 8
[2025-12-17 01:12:49] Threads: 8
[2025-12-17 01:12:49] Checking for CVMFS
[2025-12-17 01:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 01:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 01:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 01:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 01:12:49] 2.11.2.0 2934 206688 82332 154101 2 58 15651478 20275201 1 130560 1 75941681 99.941 9971195 24517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 01:12:49] CVMFS is ok
[2025-12-17 01:12:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 01:12:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 01:12:50] Further information can be found at the LHC@home message board.
[2025-12-17 01:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 01:12:50] Checking for apptainer binary...
[2025-12-17 01:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 01:12:50] Running /usr/bin/apptainer --version
[2025-12-17 01:12:50] apptainer version 1.3.2-1.el7
[2025-12-17 01:12:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 01:12:51] c-204-33.aglt2.org
[2025-12-17 01:12:51] apptainer works
[2025-12-17 01:12:51] Set ATHENA_PROC_NUMBER=8
[2025-12-17 01:12:51] Set ATHENA_CORE_NUMBER=8
[2025-12-17 01:12:51] Starting ATLAS job with PandaID=6931736385
[2025-12-17 01:12:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:11:16 (27122): wrapper (7.7.26015): starting
02:11:16 (27122): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 02:11:16] Arguments: --nthreads 8
[2025-12-17 02:11:16] Threads: 8
[2025-12-17 02:11:16] This job has been restarted, cleaning up previous attempt
[2025-12-17 02:11:16] Checking for CVMFS
[2025-12-17 02:11:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 02:11:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 02:11:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 02:11:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 02:11:17] 2.11.2.0 2934 206747 82244 154103 1 1 15730864 20275201 1 130560 1 76008129 99.941 9973919 24519 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 02:11:17] CVMFS is ok
[2025-12-17 02:11:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 02:11:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 02:11:17] Further information can be found at the LHC@home message board.
[2025-12-17 02:11:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 02:11:17] Checking for apptainer binary...
[2025-12-17 02:11:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 02:11:17] Running /usr/bin/apptainer --version
[2025-12-17 02:11:17] apptainer version 1.3.2-1.el7
[2025-12-17 02:11:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 02:11:19] c-204-33.aglt2.org
[2025-12-17 02:11:19] apptainer works
[2025-12-17 02:11:19] Set ATHENA_PROC_NUMBER=8
[2025-12-17 02:11:19] Set ATHENA_CORE_NUMBER=8
[2025-12-17 02:11:19] Starting ATLAS job with PandaID=6931736385
[2025-12-17 02:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:13:00]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:13:00] 2025-12-17 10:12:02,357 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:13:00] 2025-12-17 10:12:02,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:13:00] 2025-12-17 10:12:02,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:13:00] 2025-12-17 10:12:02,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:13:00] 2025-12-17 10:12:02,361 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:13:00] 2025-12-17 10:12:02,362 | INFO     | sum of square deviations: 1719429448.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,363 | INFO     | sum of deviations: 24511345008.000004
[2025-12-17 05:13:00] 2025-12-17 10:12:02,363 | INFO     | mean x: 1765960897.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,363 | INFO     | mean y: 2485322.3107344634
[2025-12-17 05:13:00] 2025-12-17 10:12:02,363 | INFO     | intersect: -25172189257.884174
[2025-12-17 05:13:00] 2025-12-17 10:12:02,363 | INFO     | chi2: 1.37232012967036
[2025-12-17 05:13:00] 2025-12-17 10:12:02,364 | INFO     | sum of square deviations: 1577789583.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | sum of deviations: 23858727754.5
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | mean x: 1765960744.5
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | mean y: 2484619.75
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | intersect: -26701695127.746555
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | chi2: 1.3730399466723617
[2025-12-17 05:13:00] 2025-12-17 10:12:02,365 | INFO     | current chi2=1.3730399466723617 (change=-0.05245255727427449 %)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,366 | INFO     | right removable region: 171
[2025-12-17 05:13:00] 2025-12-17 10:12:02,366 | INFO     | sum of square deviations: 1577789583.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,367 | INFO     | sum of deviations: 56204912.000000454
[2025-12-17 05:13:00] 2025-12-17 10:12:02,367 | INFO     | mean x: 1765961049.5
[2025-12-17 05:13:00] 2025-12-17 10:12:02,367 | INFO     | mean y: 2511283.534883721
[2025-12-17 05:13:00] 2025-12-17 10:12:02,367 | INFO     | intersect: -60396778.76443236
[2025-12-17 05:13:00] 2025-12-17 10:12:02,367 | INFO     | chi2: 0.06212585304307041
[2025-12-17 05:13:00] 2025-12-17 10:12:02,368 | INFO     | current chi2=0.06212585304307041 (change=95.47293290392867 %)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,368 | INFO     | sum of square deviations: 1444149868.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,369 | INFO     | sum of deviations: -5003492792.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,369 | INFO     | mean x: 1765961202.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,369 | INFO     | mean y: 2516984.6946107782
[2025-12-17 05:13:00] 2025-12-17 10:12:02,369 | INFO     | intersect: 6120977638.224689
[2025-12-17 05:13:00] 2025-12-17 10:12:02,369 | INFO     | chi2: 0.006854526373650564
[2025-12-17 05:13:00] 2025-12-17 10:12:02,370 | INFO     | current chi2=0.006854526373650564 (change=88.96670864398678 %)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,370 | INFO     | sum of square deviations: 1318277740.5
[2025-12-17 05:13:00] 2025-12-17 10:12:02,371 | INFO     | sum of deviations: -5661224072.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,371 | INFO     | mean x: 1765961354.5
[2025-12-17 05:13:00] 2025-12-17 10:12:02,371 | INFO     | mean y: 2517776.049382716
[2025-12-17 05:13:00] 2025-12-17 10:12:02,371 | INFO     | intersect: 7586278483.808314
[2025-12-17 05:13:00] 2025-12-17 10:12:02,371 | INFO     | chi2: 0.005137915132558056
[2025-12-17 05:13:00] 2025-12-17 10:12:02,372 | INFO     | current chi2=0.005137915132558056 (change=25.043469782118294 %)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,372 | INFO     | sum of square deviations: 1199940638.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | sum of deviations: -5420209656.000001
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | mean x: 1765961507.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | mean y: 2517461.3248407645
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | intersect: 7979480078.675344
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | chi2: 0.004989296552898486
[2025-12-17 05:13:00] 2025-12-17 10:12:02,373 | INFO     | current chi2=0.004989296552898486 (change=2.8925853352033872 %)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,374 | INFO     | left removable region: 40
[2025-12-17 05:13:00] 2025-12-17 10:12:02,374 | INFO     | sum of square deviations: 697054930.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,374 | INFO     | sum of deviations: -2791740639.9999995
[2025-12-17 05:13:00] 2025-12-17 10:12:02,375 | INFO     | mean x: 1765961934.0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,375 | INFO     | mean y: 2513780.1526717558
[2025-12-17 05:13:00] 2025-12-17 10:12:02,375 | INFO     | intersect: 7075281631.949943
[2025-12-17 05:13:00] 2025-12-17 10:12:02,375 | INFO     | chi2: 0.00450899034636874
[2025-12-17 05:13:00] 2025-12-17 10:12:02,375 | INFO     | current memory leak: -4.01 B/s (using 131 data points, chi2=0.00)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | could have reported an average CPU frequency of 2019 MHz (9 samples)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | ..............................
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . Timing measurements:
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . get job = 0 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . initial setup = 1 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . payload setup = 8 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . stage-in = 0 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,376 | INFO     | . payload execution = 10780 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,377 | INFO     | . stage-out = 2 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,377 | INFO     | . log creation = 0 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,377 | INFO     | ..............................
[2025-12-17 05:13:00] 2025-12-17 10:12:02,543 | INFO     | 
[2025-12-17 05:13:00] 2025-12-17 10:12:02,543 | INFO     | job summary report
[2025-12-17 05:13:00] 2025-12-17 10:12:02,543 | INFO     | --------------------------------------------------
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | PanDA job id: 6931736385
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | task id: 47898763
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | errors: (none)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | pilot state: finished 
[2025-12-17 05:13:00] 2025-12-17 10:12:02,544 | INFO     | transexitcode: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | exeerrorcode: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | exeerrordiag: 
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | exitcode: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | exitmsg: OK
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | cpuconsumptiontime: 81781 s
[2025-12-17 05:13:00] 2025-12-17 10:12:02,545 | INFO     | nevents: 400
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | neventsw: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | pid: 5420
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | pgrp: 5420
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | corecount: 8
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | event service: False
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | sizes: {0: 2283958, 6: 2284220, 11: 2284248, 10792: 2313251, 10794: 2322249, 10797: 2322305, 10808: 2322691}
[2025-12-17 05:13:00] 2025-12-17 10:12:02,546 | INFO     | --------------------------------------------------
[2025-12-17 05:13:00] 2025-12-17 10:12:02,547 | INFO     | 
[2025-12-17 05:13:00] 2025-12-17 10:12:02,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 05:13:00] 2025-12-17 10:12:02,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:13:00] 2025-12-17 10:12:02,577 | INFO     | job 6931736385 has completed (purged errors)
[2025-12-17 05:13:00] 2025-12-17 10:12:02,577 | INFO     | overall cleanup function is called
[2025-12-17 05:13:00] 2025-12-17 10:12:03,584 | INFO     | --- collectZombieJob: --- 10, [5420]
[2025-12-17 05:13:00] 2025-12-17 10:12:03,584 | INFO     | zombie collector waiting for pid 5420
[2025-12-17 05:13:00] 2025-12-17 10:12:03,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:13:00] 2025-12-17 10:12:03,585 | INFO     | collected zombie processes
[2025-12-17 05:13:00] 2025-12-17 10:12:03,585 | INFO     | will attempt to kill all subprocesses of pid=5420
[2025-12-17 05:13:00] 2025-12-17 10:12:03,678 | INFO     | process IDs to be killed: [5420] (in reverse order)
[2025-12-17 05:13:00] 2025-12-17 10:12:03,739 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:13:00] 2025-12-17 10:12:03,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:13:00] 2025-12-17 10:12:03,744 | INFO     | did not find any defunct processes belonging to 5420
[2025-12-17 05:13:00] 2025-12-17 10:12:03,747 | INFO     | did not find any defunct processes belonging to 5420
[2025-12-17 05:13:00] 2025-12-17 10:12:03,748 | INFO     | ready for new job
[2025-12-17 05:13:00] 2025-12-17 10:12:03,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:13:00] 2025-12-17 10:12:03,750 | INFO     | ***************************************
[2025-12-17 05:13:00] 2025-12-17 10:12:03,750 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:13:00] 2025-12-17 10:12:03,750 | INFO     | ***************************************
[2025-12-17 05:13:00] 2025-12-17 10:12:03,750 | INFO     | 
[2025-12-17 05:13:00] 2025-12-17 10:12:03,751 | INFO     | architecture information:
[2025-12-17 05:13:00] 2025-12-17 10:12:03,751 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:13:00] 2025-12-17 10:12:03,768 | INFO     | cat /etc/os-release:
[2025-12-17 05:13:00] NAME="CentOS Linux"
[2025-12-17 05:13:00] VERSION="7 (Core)"
[2025-12-17 05:13:00] ID="centos"
[2025-12-17 05:13:00] ID_LIKE="rhel fedora"
[2025-12-17 05:13:00] VERSION_ID="7"
[2025-12-17 05:13:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:13:00] ANSI_COLOR="0;31"
[2025-12-17 05:13:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:13:00] HOME_URL="https://www.centos.org/"
[2025-12-17 05:13:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:13:00] 
[2025-12-17 05:13:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:13:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:13:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:13:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:13:00] 
[2025-12-17 05:13:00] 2025-12-17 10:12:03,769 | INFO     | ***************************************
[2025-12-17 05:13:00] 2025-12-17 10:12:04,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 05:13:00] 2025-12-17 10:12:04,291 | INFO     | sufficient remaining disk space (18540920832 B)
[2025-12-17 05:13:00] 2025-12-17 10:12:04,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:13:00] 2025-12-17 10:12:04,292 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:13:00] 2025-12-17 10:12:04,292 | INFO     | update_server=False
[2025-12-17 05:13:00] 2025-12-17 10:12:04,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:13:00] 2025-12-17 10:12:04,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:13:00] 2025-12-17 10:12:04,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:13:00] 2025-12-17 10:12:04,293 | INFO     | aborting loop
[2025-12-17 05:13:00] 2025-12-17 10:12:04,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:13:00] 2025-12-17 10:12:05,012 | INFO     | all data control threads have been joined
[2025-12-17 05:13:00] 2025-12-17 10:12:05,293 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,297 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,298 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,542 | INFO     | [job] validate thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,566 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,603 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,680 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,681 | INFO     | all payload control threads have been joined
[2025-12-17 05:13:00] 2025-12-17 10:12:05,715 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:05,883 | INFO     | all job control threads have been joined
[2025-12-17 05:13:00] 2025-12-17 10:12:06,018 | INFO     | [data] control thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,560 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,719 | INFO     | [payload] control thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,741 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,854 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:06,888 | INFO     | [job] control thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:07,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:13:00] 2025-12-17 10:12:11,421 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:13:00] 2025-12-17 10:12:34,170 | INFO     | PID=31200 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 05:13:00] 2025-12-17 10:12:34,171 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:13:00] 2025-12-17 10:12:34,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:13:00] 2025-12-17 10:12:34,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:13:00] 2025-12-17 10:12:54,550 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:13:00] 2025-12-17 10:12:54,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625097377600)>', '<ExcThread(monitor, started 139624060012288)>']
[2025-12-17 05:13:00] 2025-12-17 10:12:55,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:13:00] 2025-12-17 10:12:55,262 | INFO     | [monitor] control thread has ended
[2025-12-17 05:13:00] 2025-12-17 10:12:59,741 | INFO     | all workflow threads have been joined
[2025-12-17 05:13:00] 2025-12-17 10:12:59,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:13:00] 2025-12-17 10:12:59,747 | INFO     | traces error code: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:59,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:13:00] 2025-12-17 10:12:59,864 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:13:00] 2025-12-17 10:12:59,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:13:00] 2025-12-17 10:12:59,873 [wrapper] pilotpid: 31200
[2025-12-17 05:13:00] 2025-12-17 10:12:59,878 [wrapper] Pilot exit status: 0
[2025-12-17 05:13:00] 2025-12-17 10:12:59,895 [wrapper] pandaids: 6931736385 6931736385
[2025-12-17 05:13:00] 2025-12-17 10:12:59,943 [wrapper] cleanup supervisor_pilot 20608 31201
[2025-12-17 05:13:00] 2025-12-17 10:12:59,948 [wrapper] Test setup, not cleaning
[2025-12-17 05:13:00] 2025-12-17 10:12:59,952 [wrapper] apfmon messages muted
[2025-12-17 05:13:00] 2025-12-17 10:12:59,956 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:13:00] 2025-12-17 10:12:59,960 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:13:00]  *** Error codes and diagnostics ***
[2025-12-17 05:13:00]     "exeErrorCode": 0,
[2025-12-17 05:13:00]     "exeErrorDiag": "",
[2025-12-17 05:13:00]     "pilotErrorCode": 0,
[2025-12-17 05:13:00]     "pilotErrorDiag": "",
[2025-12-17 05:13:00]  *** Listing of results directory ***
[2025-12-17 05:13:00] total 660872
[2025-12-17 05:13:00] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2025-12-17 05:13:00] -rwx------ 1 boincer umatlas     36322 Dec 16 20:09 runpilot2-wrapper.sh
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 20:11 pilot3.tar.gz
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 20:12 queuedata.json
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas       100 Dec 17 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:13:00] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 01:12 run_atlas
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas       105 Dec 17 01:12 job.xml
[2025-12-17 05:13:00] -rw-r--r-- 3 boincer umatlas 224698245 Dec 17 01:12 EVNT.47898761._000804.pool.root.1
[2025-12-17 05:13:00] -rw-r--r-- 3 boincer umatlas 224698245 Dec 17 01:12 ATLAS.root_0
[2025-12-17 05:13:00] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 01:12 start_atlas.sh
[2025-12-17 05:13:00] drwxrwx--x 2 boincer umatlas      4096 Dec 17 01:12 shared
[2025-12-17 05:13:00] -rw-r--r-- 2 boincer umatlas    592403 Dec 17 01:12 input.tar.gz
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas         0 Dec 17 01:12 boinc_lockfile
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas      2508 Dec 17 02:11 pandaJob.out
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas        57 Dec 17 02:11 setup.sh.local
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas    987409 Dec 17 02:11 agis_schedconf.cvmfs.json
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas      5911 Dec 17 05:03 init_data.xml
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas 219597947 Dec 17 05:11 HITS.47898763._020724.pool.root.1
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas       532 Dec 17 05:11 boinc_task_state.xml
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas      1050 Dec 17 05:11 memory_monitor_summary.json
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas   1516240 Dec 17 05:11 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas    412202 Dec 17 05:11 log.47898763._020724.job.log.tgz.1
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas      7847 Dec 17 05:12 heartbeat.json
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas        96 Dec 17 05:12 pilot_heartbeat.json
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas        29 Dec 17 05:12 wrapper_checkpoint.txt
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 05:12 boinc_mmap_file
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas      4746 Dec 17 05:12 pilotlog.txt
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas   1499427 Dec 17 05:12 log.47898763._020724.job.log.1
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas       357 Dec 17 05:13 output.list
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas       620 Dec 17 05:13 runtime_log
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas   1935360 Dec 17 05:13 result.tar.gz
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas      9428 Dec 17 05:13 runtime_log.err
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas       788 Dec 17 05:13 fVHMDm0Dvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUhWKDmAiEZym.diag
[2025-12-17 05:13:00] -rw-r--r-- 1 boincer umatlas     23027 Dec 17 05:13 stderr.txt
[2025-12-17 05:13:00] HITS file was successfully produced:
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas 219597947 Dec 17 05:11 shared/HITS.pool.root.1
[2025-12-17 05:13:00]  *** Contents of shared directory: ***
[2025-12-17 05:13:00] total 436372
[2025-12-17 05:13:00] -rw-r--r-- 3 boincer umatlas 224698245 Dec 17 01:12 ATLAS.root_0
[2025-12-17 05:13:00] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 01:12 start_atlas.sh
[2025-12-17 05:13:00] -rw-r--r-- 2 boincer umatlas    592403 Dec 17 01:12 input.tar.gz
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas 219597947 Dec 17 05:11 HITS.pool.root.1
[2025-12-17 05:13:00] -rw------- 1 boincer umatlas   1935360 Dec 17 05:13 result.tar.gz
05:13:01 (27122): run_atlas exited; CPU time 81722.954145
05:13:01 (27122): called boinc_finish(0)

</stderr_txt>
]]>

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