Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:47:23 (10029): wrapper (7.7.26015): starting
00:47:23 (10029): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:47:23] Arguments: --nthreads 12
[2025-12-17 00:47:23] Threads: 12
[2025-12-17 00:47:23] Checking for CVMFS
[2025-12-17 00:47:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:47:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:47:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:47:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:47:23] 2.11.2.0 25590 218202 95508 154101 1 59 15076535 20275200 1 130560 2 111987886 99.963 9149844 27854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 00:47:23] CVMFS is ok
[2025-12-17 00:47:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:47:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:47:23] Further information can be found at the LHC@home message board.
[2025-12-17 00:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:47:23] Checking for apptainer binary...
[2025-12-17 00:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:47:23] Running /usr/bin/apptainer --version
[2025-12-17 00:47:23] apptainer version 1.3.2-1.el7
[2025-12-17 00:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:47:25] c-205-24.aglt2.org
[2025-12-17 00:47:25] apptainer works
[2025-12-17 00:47:25] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:47:25] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:47:25] Starting ATLAS job with PandaID=6931735068
[2025-12-17 00:47:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 02:05:53]  *** The last 200 lines of the pilot log: ***
[2025-12-17 02:05:53]  status=None
[2025-12-17 02:05:53]  status_code=0
[2025-12-17 02:05:53]  storage_token=
[2025-12-17 02:05:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6931735068/log.47886831._016513.job.log.tgz.1
[2025-12-17 02:05:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/38/log.47886831._016513.job.log.tgz.1
[2025-12-17 02:05:53]  workdir=None
[2025-12-17 02:05:53] ]
[2025-12-17 02:05:53] 2025-12-17 07:04:44,047 | INFO     | transferring file log.47886831._016513.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931735068/log.47886831._016513.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-17 02:05:53] 2025-12-17 07:04:44,047 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931735068/log.47886831._016513.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._016513.job
[2025-12-17 02:05:53] 2025-12-17 07:04:44,069 | INFO     | adding to output.list: log.47886831._016513.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7f/38/log.47886831._016513.job.log.tg
[2025-12-17 02:05:53] 2025-12-17 07:04:44,070 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 02:05:53] 2025-12-17 07:04:44,070 | INFO     | summary of transferred files:
[2025-12-17 02:05:53] 2025-12-17 07:04:44,070 | INFO     |  -- lfn=log.47886831._016513.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 02:05:53] 2025-12-17 07:04:44,070 | INFO     | stage-out finished correctly
[2025-12-17 02:05:53] 2025-12-17 07:04:44,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 02:05:53] 2025-12-17 07:04:45,346 | INFO     | monitor loop #346: job 0:6931735068 is in state 'finished'
[2025-12-17 02:05:53] 2025-12-17 07:04:45,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:05:53] 2025-12-17 07:04:45,820 | INFO     | time since job start (4625s) is within the limit (174528.0s)
[2025-12-17 02:05:53] 2025-12-17 07:04:47,104 | INFO     | job 6931735068 has state=finished
[2025-12-17 02:05:53] 2025-12-17 07:04:47,105 | INFO     | preparing for final server update for job 6931735068 in state='finished'
[2025-12-17 02:05:53] 2025-12-17 07:04:47,105 | INFO     | this job has now completed (state=finished)
[2025-12-17 02:05:53] 2025-12-17 07:04:47,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 02:05:53] 2025-12-17 07:04:47,106 | INFO     | log transfer has been attempted: DONE
[2025-12-17 02:05:53] 2025-12-17 07:04:47,106 | INFO     | job 6931735068 has finished - writing final server update
[2025-12-17 02:05:53] 2025-12-17 07:04:47,106 | INFO     | total number of processed events: 400 (read)
[2025-12-17 02:05:53] 2025-12-17 07:04:47,107 | INFO     | executing command: lscpu
[2025-12-17 02:05:53] 2025-12-17 07:04:47,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 02:05:53] 2025-12-17 07:04:47,826 | INFO     | time since job start (4627s) is within the limit (174528.0s)
[2025-12-17 02:05:53] 2025-12-17 07:04:47,849 | INFO     | monitor loop #347: job 0:6931735068 is in state 'finished'
[2025-12-17 02:05:53] 2025-12-17 07:04:47,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:05:53] 2025-12-17 07:04:49,831 | INFO     | time since job start (4629s) is within the limit (174528.0s)
[2025-12-17 02:05:53] 2025-12-17 07:04:50,352 | INFO     | monitor loop #348: job 0:6931735068 is in state 'finished'
[2025-12-17 02:05:53] 2025-12-17 07:04:50,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:05:53] 2025-12-17 07:04:51,836 | INFO     | time since job start (4631s) is within the limit (174528.0s)
[2025-12-17 02:05:53] 2025-12-17 07:04:52,855 | INFO     | monitor loop #349: job 0:6931735068 is in state 'finished'
[2025-12-17 02:05:53] 2025-12-17 07:04:52,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:05:53] 2025-12-17 07:04:52,987 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 02:05:53] 2025-12-17 07:04:52,990 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-12-17 02:05:53] 2025-12-17 07:04:52,992 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931735068/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 02:05:53] 2025-12-17 07:04:52,993 | INFO     | extracted standard info from prmon json
[2025-12-17 02:05:53] 2025-12-17 07:04:52,993 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 02:05:53] 2025-12-17 07:04:52,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 02:05:53] 2025-12-17 07:04:52,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 02:05:53] 2025-12-17 07:04:52,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 02:05:53] 2025-12-17 07:04:52,996 | INFO     | fitting pss+swap vs Time
[2025-12-17 02:05:53] 2025-12-17 07:04:52,997 | INFO     | sum of square deviations: 101843770.0
[2025-12-17 02:05:53] 2025-12-17 07:04:52,997 | INFO     | sum of deviations: -5252609350.000001
[2025-12-17 02:05:53] 2025-12-17 07:04:52,997 | INFO     | mean x: 1765952868.0
[2025-12-17 02:05:53] 2025-12-17 07:04:52,998 | INFO     | mean y: 2717648.362318841
[2025-12-17 02:05:53] 2025-12-17 07:04:52,998 | INFO     | intersect: 91082030070.871
[2025-12-17 02:05:53] 2025-12-17 07:04:52,998 | INFO     | chi2: 0.12924844190667273
[2025-12-17 02:05:53] 2025-12-17 07:04:52,998 | INFO     | current memory leak: -51.58 B/s (using 69 data points, chi2=0.13)
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | ..............................
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | . Timing measurements:
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | . get job = 0 s
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | . initial setup = 2 s
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | . payload setup = 7 s
[2025-12-17 02:05:53] 2025-12-17 07:04:52,999 | INFO     | . stage-in = 0 s
[2025-12-17 02:05:53] 2025-12-17 07:04:53,000 | INFO     | . payload execution = 4595 s
[2025-12-17 02:05:53] 2025-12-17 07:04:53,000 | INFO     | . stage-out = 0 s
[2025-12-17 02:05:53] 2025-12-17 07:04:53,000 | INFO     | . log creation = 0 s
[2025-12-17 02:05:53] 2025-12-17 07:04:53,000 | INFO     | ..............................
[2025-12-17 02:05:53] 2025-12-17 07:04:53,082 | INFO     | 
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | job summary report
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | --------------------------------------------------
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | PanDA job id: 6931735068
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | task id: 47886831
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | errors: (none)
[2025-12-17 02:05:53] 2025-12-17 07:04:53,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | pilot state: finished 
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | transexitcode: 0
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | exeerrorcode: 0
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | exeerrordiag: 
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | exitcode: 0
[2025-12-17 02:05:53] 2025-12-17 07:04:53,084 | INFO     | exitmsg: OK
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | cpuconsumptiontime: 47712 s
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | nevents: 400
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | neventsw: 0
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | pid: 20128
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | pgrp: 20128
[2025-12-17 02:05:53] 2025-12-17 07:04:53,085 | INFO     | corecount: 12
[2025-12-17 02:05:53] 2025-12-17 07:04:53,086 | INFO     | event service: False
[2025-12-17 02:05:53] 2025-12-17 07:04:53,086 | INFO     | sizes: {0: 2283993, 5: 2284255, 11: 2284311, 4605: 2310437, 4606: 2310436, 4607: 2319490, 4608: 2319674, 4616: 2319868}
[2025-12-17 02:05:53] 2025-12-17 07:04:53,086 | INFO     | --------------------------------------------------
[2025-12-17 02:05:53] 2025-12-17 07:04:53,086 | INFO     | 
[2025-12-17 02:05:53] 2025-12-17 07:04:53,086 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 02:05:53] 2025-12-17 07:04:53,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 02:05:53] 2025-12-17 07:04:53,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 02:05:53] 2025-12-17 07:04:53,115 | INFO     | job 6931735068 has completed (purged errors)
[2025-12-17 02:05:53] 2025-12-17 07:04:53,115 | INFO     | overall cleanup function is called
[2025-12-17 02:05:53] 2025-12-17 07:04:54,123 | INFO     | --- collectZombieJob: --- 10, [20128]
[2025-12-17 02:05:53] 2025-12-17 07:04:54,123 | INFO     | zombie collector waiting for pid 20128
[2025-12-17 02:05:53] 2025-12-17 07:04:54,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 02:05:53] 2025-12-17 07:04:54,130 | INFO     | collected zombie processes
[2025-12-17 02:05:53] 2025-12-17 07:04:54,131 | INFO     | will attempt to kill all subprocesses of pid=20128
[2025-12-17 02:05:53] 2025-12-17 07:04:54,224 | INFO     | process IDs to be killed: [20128] (in reverse order)
[2025-12-17 02:05:53] 2025-12-17 07:04:54,315 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 02:05:53] 2025-12-17 07:04:54,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 02:05:53] 2025-12-17 07:04:54,319 | INFO     | did not find any defunct processes belonging to 20128
[2025-12-17 02:05:53] 2025-12-17 07:04:54,321 | INFO     | did not find any defunct processes belonging to 20128
[2025-12-17 02:05:53] 2025-12-17 07:04:54,321 | INFO     | ready for new job
[2025-12-17 02:05:53] 2025-12-17 07:04:54,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 02:05:53] 2025-12-17 07:04:54,322 | INFO     | ***************************************
[2025-12-17 02:05:53] 2025-12-17 07:04:54,323 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 02:05:53] 2025-12-17 07:04:54,323 | INFO     | ***************************************
[2025-12-17 02:05:53] 2025-12-17 07:04:54,323 | INFO     | 
[2025-12-17 02:05:53] 2025-12-17 07:04:54,323 | INFO     | architecture information:
[2025-12-17 02:05:53] 2025-12-17 07:04:54,324 | INFO     | executing command: cat /etc/os-release
[2025-12-17 02:05:53] 2025-12-17 07:04:54,339 | INFO     | cat /etc/os-release:
[2025-12-17 02:05:53] NAME="CentOS Linux"
[2025-12-17 02:05:53] VERSION="7 (Core)"
[2025-12-17 02:05:53] ID="centos"
[2025-12-17 02:05:53] ID_LIKE="rhel fedora"
[2025-12-17 02:05:53] VERSION_ID="7"
[2025-12-17 02:05:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 02:05:53] ANSI_COLOR="0;31"
[2025-12-17 02:05:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 02:05:53] HOME_URL="https://www.centos.org/"
[2025-12-17 02:05:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 02:05:53] 
[2025-12-17 02:05:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 02:05:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 02:05:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 02:05:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 02:05:53] 
[2025-12-17 02:05:53] 2025-12-17 07:04:54,339 | INFO     | ***************************************
[2025-12-17 02:05:53] 2025-12-17 07:04:54,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 02:05:53] 2025-12-17 07:04:54,859 | INFO     | sufficient remaining disk space (29453451264 B)
[2025-12-17 02:05:53] 2025-12-17 07:04:54,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 02:05:53] 2025-12-17 07:04:54,860 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 02:05:53] 2025-12-17 07:04:54,860 | INFO     | update_server=False
[2025-12-17 02:05:53] 2025-12-17 07:04:54,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 02:05:53] 2025-12-17 07:04:54,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 02:05:53] 2025-12-17 07:04:54,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:05:53] 2025-12-17 07:04:55,052 | INFO     | all job control threads have been joined
[2025-12-17 02:05:53] 2025-12-17 07:04:55,130 | INFO     | all data control threads have been joined
[2025-12-17 02:05:53] 2025-12-17 07:04:55,137 | INFO     | all payload control threads have been joined
[2025-12-17 02:05:53] 2025-12-17 07:04:55,358 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 02:05:53] 2025-12-17 07:04:55,359 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 02:05:53] 2025-12-17 07:04:55,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:05:53] 2025-12-17 07:04:55,359 | INFO     | will abort loop
[2025-12-17 02:05:53] 2025-12-17 07:04:55,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 02:05:53] 2025-12-17 07:04:55,865 | INFO     | [job] retrieve thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:55,866 | INFO     | [job] queue monitor thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:55,939 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,057 | INFO     | [job] control thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,118 | INFO     | [payload] failed_post thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,132 | INFO     | [data] control thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,138 | INFO     | [payload] control thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,365 | INFO     | [job] job monitor thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,559 | INFO     | [data] copytool_in thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,859 | INFO     | [payload] validate_post thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,866 | INFO     | [data] copytool_out thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:56,913 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:57,152 | INFO     | [job] validate thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:57,269 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:04:59,578 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:05:05,685 | INFO     | job.realtimelogging is not enabled
[2025-12-17 02:05:53] 2025-12-17 07:05:06,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 02:05:53] 2025-12-17 07:05:25,044 | INFO     | PID=13707 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 02:05:53] 2025-12-17 07:05:25,045 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 02:05:53] 2025-12-17 07:05:25,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 02:05:53] 2025-12-17 07:05:25,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 02:05:53] 2025-12-17 07:05:47,441 | INFO     | [monitor] cgroup control has ended
[2025-12-17 02:05:53] 2025-12-17 07:05:48,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268206339904)>', '<ExcThread(monitor, started 140267080361728)>']
[2025-12-17 02:05:53] 2025-12-17 07:05:49,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 02:05:53] 2025-12-17 07:05:49,164 | INFO     | [monitor] control thread has ended
[2025-12-17 02:05:53] 2025-12-17 07:05:53,185 | INFO     | all workflow threads have been joined
[2025-12-17 02:05:53] 2025-12-17 07:05:53,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 02:05:53] 2025-12-17 07:05:53,185 | INFO     | traces error code: 0
[2025-12-17 02:05:53] 2025-12-17 07:05:53,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 02:05:53] 2025-12-17 07:05:53,278 [wrapper] ==== pilot stdout END ====
[2025-12-17 02:05:53] 2025-12-17 07:05:53,282 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 02:05:53] 2025-12-17 07:05:53,286 [wrapper] pilotpid: 13707
[2025-12-17 02:05:53] 2025-12-17 07:05:53,290 [wrapper] Pilot exit status: 0
[2025-12-17 02:05:53] 2025-12-17 07:05:53,307 [wrapper] pandaids: 6931735068
[2025-12-17 02:05:53] 2025-12-17 07:05:53,353 [wrapper] cleanup supervisor_pilot 15849 13708
[2025-12-17 02:05:53] 2025-12-17 07:05:53,357 [wrapper] Test setup, not cleaning
[2025-12-17 02:05:53] 2025-12-17 07:05:53,361 [wrapper] apfmon messages muted
[2025-12-17 02:05:53] 2025-12-17 07:05:53,365 [wrapper] ==== wrapper stdout END ====
[2025-12-17 02:05:53] 2025-12-17 07:05:53,369 [wrapper] ==== wrapper stderr END ====
[2025-12-17 02:05:53]  *** Error codes and diagnostics ***
[2025-12-17 02:05:53]     "exeErrorCode": 0,
[2025-12-17 02:05:53]     "exeErrorDiag": "",
[2025-12-17 02:05:53]     "pilotErrorCode": 0,
[2025-12-17 02:05:53]     "pilotErrorDiag": "",
[2025-12-17 02:05:53]  *** Listing of results directory ***
[2025-12-17 02:05:53] total 335564
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 20:05 pilot3.tar.gz
[2025-12-17 02:05:53] -rwx------ 1 boincer umatlas     36322 Dec 16 20:08 runpilot2-wrapper.sh
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 20:10 queuedata.json
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas       100 Dec 17 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 02:05:53] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 00:47 run_atlas
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas       105 Dec 17 00:47 job.xml
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas 194249419 Dec 17 00:47 EVNT.47886829._000659.pool.root.1
[2025-12-17 02:05:53] drwxrwx--x 2 boincer umatlas      4096 Dec 17 00:47 shared
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas    592418 Dec 17 00:47 input.tar.gz
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 00:47 start_atlas.sh
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas         0 Dec 17 00:47 boinc_lockfile
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas      2539 Dec 17 00:47 pandaJob.out
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas        57 Dec 17 00:47 setup.sh.local
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas    987409 Dec 17 00:47 agis_schedconf.cvmfs.json
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas   1516240 Dec 17 00:47 agis_ddmendpoints.agis.ALL.json
[2025-12-17 02:05:53] drwx------ 5 boincer umatlas      4096 Dec 17 00:47 pilot3
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas      5953 Dec 17 02:02 init_data.xml
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas 143340861 Dec 17 02:04 HITS.47886831._016513.pool.root.1
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas       530 Dec 17 02:04 boinc_task_state.xml
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas        95 Dec 17 02:04 pilot_heartbeat.json
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas      1046 Dec 17 02:04 memory_monitor_summary.json
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas    386799 Dec 17 02:04 log.47886831._016513.job.log.tgz.1
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas      7852 Dec 17 02:04 heartbeat.json
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 02:05 boinc_mmap_file
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas        27 Dec 17 02:05 wrapper_checkpoint.txt
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas      5004 Dec 17 02:05 pilotlog.txt
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas    671470 Dec 17 02:05 log.47886831._016513.job.log.1
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas       357 Dec 17 02:05 output.list
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas       620 Dec 17 02:05 runtime_log
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas   1075200 Dec 17 02:05 result.tar.gz
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas      9344 Dec 17 02:05 runtime_log.err
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas       659 Dec 17 02:05 40DODm1Cvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvdWKDmzkE6Jn.diag
[2025-12-17 02:05:53] -rw-r--r-- 1 boincer umatlas     22058 Dec 17 02:05 stderr.txt
[2025-12-17 02:05:53] HITS file was successfully produced:
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas 143340861 Dec 17 02:04 shared/HITS.pool.root.1
[2025-12-17 02:05:53]  *** Contents of shared directory: ***
[2025-12-17 02:05:53] total 331332
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas 194249419 Dec 17 00:47 ATLAS.root_0
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas    592418 Dec 17 00:47 input.tar.gz
[2025-12-17 02:05:53] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 00:47 start_atlas.sh
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas 143340861 Dec 17 02:04 HITS.pool.root.1
[2025-12-17 02:05:53] -rw------- 1 boincer umatlas   1075200 Dec 17 02:05 result.tar.gz
02:05:55 (10029): run_atlas exited; CPU time 47704.575920
02:05:55 (10029): called boinc_finish(0)

</stderr_txt>
]]>

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