Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:31:37 (25061): wrapper (7.7.26015): starting
00:31:37 (25061): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:31:37] Arguments: --nthreads 12
[2025-12-17 00:31:37] Threads: 12
[2025-12-17 00:31:37] Checking for CVMFS
[2025-12-17 00:31:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:31:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:31:37] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:31:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:31:37] 2.11.2.0 2998 133218 98376 154101 0 59 13748572 20275201 1 130560 0 57319952 99.957 5874166 35549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 00:31:37] CVMFS is ok
[2025-12-17 00:31:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:31:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:31:37] Further information can be found at the LHC@home message board.
[2025-12-17 00:31:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:31:37] Checking for apptainer binary...
[2025-12-17 00:31:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:31:37] Running /usr/bin/apptainer --version
[2025-12-17 00:31:37] apptainer version 1.3.2-1.el7
[2025-12-17 00:31:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:31:39] c-205-12.aglt2.org
[2025-12-17 00:31:39] apptainer works
[2025-12-17 00:31:39] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:31:39] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:31:39] Starting ATLAS job with PandaID=6931734693
[2025-12-17 00:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 02:06:11]  *** The last 200 lines of the pilot log: ***
[2025-12-17 02:06:11] 2025-12-17 07:05:49,247 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 02:06:11] 2025-12-17 07:05:49,247 | INFO     | summary of transferred files:
[2025-12-17 02:06:11] 2025-12-17 07:05:49,247 | INFO     |  -- lfn=log.47898782._005320.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 02:06:11] 2025-12-17 07:05:49,247 | INFO     | stage-out finished correctly
[2025-12-17 02:06:11] 2025-12-17 07:05:49,876 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 02:06:11] 2025-12-17 07:05:50,859 | INFO     | time since job start (5636s) is within the limit (174528.0s)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,088 | WARNING  | process 2867 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 02:06:11] 2025-12-17 07:05:51,089 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931734693/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,090 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931734693/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,090 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-17 02:06:11] 2025-12-17 07:05:51,091 | WARNING  | maxPSS not found in memory monitor output
[2025-12-17 02:06:11] 2025-12-17 07:05:51,091 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4438079 B
[2025-12-17 02:06:11] 2025-12-17 07:05:51,092 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16323 B
[2025-12-17 02:06:11] 2025-12-17 07:05:51,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 02:06:11] 2025-12-17 07:05:51,111 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,111 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,112 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6931734693: 4744128 B (within 2768240640 B limit)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,112 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6931734693/HITS.47898782._005320.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,113 | INFO     | total size of present files: 0 B (workdir size: 4744128 B)
[2025-12-17 02:06:11] 2025-12-17 07:05:51,113 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6931734693/HITS.47898782._005320.pool.root.1 since it does not exist
[2025-12-17 02:06:11] 2025-12-17 07:05:51,205 | INFO     | number of running child processes to parent process 2867: 1
[2025-12-17 02:06:11] 2025-12-17 07:05:51,205 | INFO     | maximum number of monitored processes: 6
[2025-12-17 02:06:11] 2025-12-17 07:05:52,356 | INFO     | job 6931734693 has state=finished
[2025-12-17 02:06:11] 2025-12-17 07:05:52,356 | INFO     | preparing for final server update for job 6931734693 in state='finished'
[2025-12-17 02:06:11] 2025-12-17 07:05:52,362 | INFO     | this job has now completed (state=finished)
[2025-12-17 02:06:11] 2025-12-17 07:05:52,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 02:06:11] 2025-12-17 07:05:52,362 | INFO     | log transfer has been attempted: DONE
[2025-12-17 02:06:11] 2025-12-17 07:05:52,362 | INFO     | job 6931734693 has finished - writing final server update
[2025-12-17 02:06:11] 2025-12-17 07:05:52,363 | INFO     | total number of processed events: 400 (read)
[2025-12-17 02:06:11] 2025-12-17 07:05:52,364 | INFO     | executing command: lscpu
[2025-12-17 02:06:11] 2025-12-17 07:05:52,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 02:06:11] 2025-12-17 07:05:52,866 | INFO     | time since job start (5638s) is within the limit (174528.0s)
[2025-12-17 02:06:11] 2025-12-17 07:05:53,708 | INFO     | monitor loop #419: job 0:6931734693 is in state 'finished'
[2025-12-17 02:06:11] 2025-12-17 07:05:53,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:06:11] 2025-12-17 07:05:54,872 | INFO     | time since job start (5640s) is within the limit (174528.0s)
[2025-12-17 02:06:11] 2025-12-17 07:05:56,212 | INFO     | monitor loop #420: job 0:6931734693 is in state 'finished'
[2025-12-17 02:06:11] 2025-12-17 07:05:56,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 02:06:11] 2025-12-17 07:05:56,877 | INFO     | time since job start (5642s) is within the limit (174528.0s)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,153 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 02:06:11] 2025-12-17 07:05:57,157 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-12-17 02:06:11] 2025-12-17 07:05:57,160 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931734693/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,161 | INFO     | extracted standard info from prmon json
[2025-12-17 02:06:11] 2025-12-17 07:05:57,161 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 02:06:11] 2025-12-17 07:05:57,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 02:06:11] 2025-12-17 07:05:57,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 02:06:11] 2025-12-17 07:05:57,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 02:06:11] 2025-12-17 07:05:57,163 | INFO     | fitting pss+swap vs Time
[2025-12-17 02:06:11] 2025-12-17 07:05:57,163 | INFO     | sum of square deviations: 190403570.0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,164 | INFO     | sum of deviations: -14256514716.0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,164 | INFO     | mean x: 1765952410.0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,164 | INFO     | mean y: 2822859.1411764706
[2025-12-17 02:06:11] 2025-12-17 07:05:57,164 | INFO     | intersect: 132228949296.37482
[2025-12-17 02:06:11] 2025-12-17 07:05:57,164 | INFO     | chi2: 0.06409142680207842
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | current memory leak: -74.88 B/s (using 85 data points, chi2=0.06)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | could have reported an average CPU frequency of 2008 MHz (7 samples)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | ..............................
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | . Timing measurements:
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | . get job = 0 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | . initial setup = 2 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,165 | INFO     | . payload setup = 7 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,166 | INFO     | . stage-in = 0 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,166 | INFO     | . payload execution = 5607 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,166 | INFO     | . stage-out = 0 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,166 | INFO     | . log creation = 0 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,166 | INFO     | ..............................
[2025-12-17 02:06:11] 2025-12-17 07:05:57,250 | INFO     | 
[2025-12-17 02:06:11] 2025-12-17 07:05:57,250 | INFO     | job summary report
[2025-12-17 02:06:11] 2025-12-17 07:05:57,250 | INFO     | --------------------------------------------------
[2025-12-17 02:06:11] 2025-12-17 07:05:57,250 | INFO     | PanDA job id: 6931734693
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | task id: 47898782
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | errors: (none)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | pilot state: finished 
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | transexitcode: 0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,251 | INFO     | exeerrorcode: 0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | exeerrordiag: 
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | exitcode: 0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | exitmsg: OK
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | cpuconsumptiontime: 62470 s
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | nevents: 400
[2025-12-17 02:06:11] 2025-12-17 07:05:57,252 | INFO     | neventsw: 0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | pid: 2867
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | pgrp: 2867
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | corecount: 12
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | event service: False
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | sizes: {0: 2283980, 5: 2284242, 11: 2284298, 5617: 2310884, 5618: 2319937, 5619: 2319937, 5626: 2320287}
[2025-12-17 02:06:11] 2025-12-17 07:05:57,253 | INFO     | --------------------------------------------------
[2025-12-17 02:06:11] 2025-12-17 07:05:57,254 | INFO     | 
[2025-12-17 02:06:11] 2025-12-17 07:05:57,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 02:06:11] 2025-12-17 07:05:57,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | job 6931734693 has completed (purged errors)
[2025-12-17 02:06:11] 2025-12-17 07:05:57,282 | INFO     | overall cleanup function is called
[2025-12-17 02:06:11] 2025-12-17 07:05:57,998 | INFO     | PID=28742 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 02:06:11] 2025-12-17 07:05:58,288 | INFO     | --- collectZombieJob: --- 10, [2867]
[2025-12-17 02:06:11] 2025-12-17 07:05:58,288 | INFO     | zombie collector waiting for pid 2867
[2025-12-17 02:06:11] 2025-12-17 07:05:58,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 02:06:11] 2025-12-17 07:05:58,288 | INFO     | collected zombie processes
[2025-12-17 02:06:11] 2025-12-17 07:05:58,288 | INFO     | will attempt to kill all subprocesses of pid=2867
[2025-12-17 02:06:11] 2025-12-17 07:05:58,377 | INFO     | process IDs to be killed: [2867] (in reverse order)
[2025-12-17 02:06:11] 2025-12-17 07:05:58,422 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 02:06:11] 2025-12-17 07:05:58,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 02:06:11] 2025-12-17 07:05:58,426 | INFO     | did not find any defunct processes belonging to 2867
[2025-12-17 02:06:11] 2025-12-17 07:05:58,430 | INFO     | did not find any defunct processes belonging to 2867
[2025-12-17 02:06:11] 2025-12-17 07:05:58,430 | INFO     | ready for new job
[2025-12-17 02:06:11] 2025-12-17 07:05:58,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 02:06:11] 2025-12-17 07:05:58,432 | INFO     | ***************************************
[2025-12-17 02:06:11] 2025-12-17 07:05:58,432 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 02:06:11] 2025-12-17 07:05:58,432 | INFO     | ***************************************
[2025-12-17 02:06:11] 2025-12-17 07:05:58,432 | INFO     | 
[2025-12-17 02:06:11] 2025-12-17 07:05:58,433 | INFO     | architecture information:
[2025-12-17 02:06:11] 2025-12-17 07:05:58,433 | INFO     | executing command: cat /etc/os-release
[2025-12-17 02:06:11] 2025-12-17 07:05:58,450 | INFO     | cat /etc/os-release:
[2025-12-17 02:06:11] NAME="CentOS Linux"
[2025-12-17 02:06:11] VERSION="7 (Core)"
[2025-12-17 02:06:11] ID="centos"
[2025-12-17 02:06:11] ID_LIKE="rhel fedora"
[2025-12-17 02:06:11] VERSION_ID="7"
[2025-12-17 02:06:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 02:06:11] ANSI_COLOR="0;31"
[2025-12-17 02:06:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 02:06:11] HOME_URL="https://www.centos.org/"
[2025-12-17 02:06:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 02:06:11] 
[2025-12-17 02:06:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 02:06:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 02:06:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 02:06:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 02:06:11] 
[2025-12-17 02:06:11] 2025-12-17 07:05:58,450 | INFO     | ***************************************
[2025-12-17 02:06:11] 2025-12-17 07:05:58,953 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 02:06:11] 2025-12-17 07:05:58,971 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-12-17 02:06:11] 2025-12-17 07:05:58,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 02:06:11] 2025-12-17 07:05:58,972 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 02:06:11] 2025-12-17 07:05:58,972 | INFO     | update_server=False
[2025-12-17 02:06:11] 2025-12-17 07:05:58,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 02:06:11] 2025-12-17 07:05:58,972 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 02:06:11] 2025-12-17 07:05:58,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:06:11] 2025-12-17 07:05:58,973 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 02:06:11] 2025-12-17 07:05:58,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 02:06:11] 2025-12-17 07:05:58,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 02:06:11] 2025-12-17 07:05:59,005 | INFO     | all payload control threads have been joined
[2025-12-17 02:06:11] 2025-12-17 07:05:59,597 | INFO     | all data control threads have been joined
[2025-12-17 02:06:11] 2025-12-17 07:05:59,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 02:06:11] 2025-12-17 07:05:59,726 | INFO     | aborting loop
[2025-12-17 02:06:11] 2025-12-17 07:05:59,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 02:06:11] 2025-12-17 07:05:59,978 | INFO     | [job] retrieve thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:05:59,979 | INFO     | [job] queue monitor thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,011 | INFO     | [payload] control thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,121 | INFO     | [payload] failed_post thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,137 | INFO     | all job control threads have been joined
[2025-12-17 02:06:11] 2025-12-17 07:06:00,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 02:06:11] 2025-12-17 07:06:00,603 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,603 | INFO     | [data] control thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,606 | INFO     | [job] validate thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,686 | INFO     | [payload] validate_post thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,731 | INFO     | [job] job monitor thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:00,794 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:01,143 | INFO     | [job] control thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:01,265 | INFO     | [data] copytool_in thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:01,287 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:01,844 | INFO     | [data] copytool_out thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:03,100 | INFO     | [monitor] cgroup control has ended
[2025-12-17 02:06:11] 2025-12-17 07:06:04,471 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 02:06:11] 2025-12-17 07:06:06,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180865046336)>', '<ExcThread(monitor, started 140179545257728)>']
[2025-12-17 02:06:11] 2025-12-17 07:06:07,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 02:06:11] 2025-12-17 07:06:07,012 | INFO     | [monitor] control thread has ended
[2025-12-17 02:06:11] 2025-12-17 07:06:11,067 | INFO     | all workflow threads have been joined
[2025-12-17 02:06:11] 2025-12-17 07:06:11,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 02:06:11] 2025-12-17 07:06:11,067 | INFO     | traces error code: 0
[2025-12-17 02:06:11] 2025-12-17 07:06:11,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 02:06:11] 2025-12-17 07:06:11,158 [wrapper] ==== pilot stdout END ====
[2025-12-17 02:06:11] 2025-12-17 07:06:11,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 02:06:11] 2025-12-17 07:06:11,166 [wrapper] pilotpid: 28742
[2025-12-17 02:06:11] 2025-12-17 07:06:11,169 [wrapper] Pilot exit status: 0
[2025-12-17 02:06:11] 2025-12-17 07:06:11,185 [wrapper] pandaids: 6931734693
[2025-12-17 02:06:11] 2025-12-17 07:06:11,225 [wrapper] cleanup supervisor_pilot  1944 28743
[2025-12-17 02:06:11] 2025-12-17 07:06:11,229 [wrapper] Test setup, not cleaning
[2025-12-17 02:06:11] 2025-12-17 07:06:11,233 [wrapper] apfmon messages muted
[2025-12-17 02:06:11] 2025-12-17 07:06:11,237 [wrapper] ==== wrapper stdout END ====
[2025-12-17 02:06:11] 2025-12-17 07:06:11,241 [wrapper] ==== wrapper stderr END ====
[2025-12-17 02:06:11]  *** Error codes and diagnostics ***
[2025-12-17 02:06:11]     "exeErrorCode": 0,
[2025-12-17 02:06:11]     "exeErrorDiag": "",
[2025-12-17 02:06:11]     "pilotErrorCode": 0,
[2025-12-17 02:06:11]     "pilotErrorDiag": "",
[2025-12-17 02:06:11]  *** Listing of results directory ***
[2025-12-17 02:06:11] total 403356
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 20:05 pilot3.tar.gz
[2025-12-17 02:06:11] -rwx------ 1 boincer umatlas     36322 Dec 16 20:07 runpilot2-wrapper.sh
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 20:08 queuedata.json
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas       100 Dec 17 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 02:06:11] -rwxr-xr-x 1 boincer umatlas      7986 Dec 17 00:31 run_atlas
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas       105 Dec 17 00:31 job.xml
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas 212417859 Dec 17 00:31 EVNT.47898779._000215.pool.root.1
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 00:31 start_atlas.sh
[2025-12-17 02:06:11] drwxrwx--x 2 boincer umatlas      4096 Dec 17 00:31 shared
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas    592393 Dec 17 00:31 input.tar.gz
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas         0 Dec 17 00:31 boinc_lockfile
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas      2522 Dec 17 00:31 pandaJob.out
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas        57 Dec 17 00:31 setup.sh.local
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas    987409 Dec 17 00:31 agis_schedconf.cvmfs.json
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas   1516240 Dec 17 00:31 agis_ddmendpoints.agis.ALL.json
[2025-12-17 02:06:11] drwx------ 5 boincer umatlas      4096 Dec 17 00:31 pilot3
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas      5953 Dec 17 02:00 init_data.xml
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas        95 Dec 17 02:05 pilot_heartbeat.json
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas 194283922 Dec 17 02:05 HITS.47898782._005320.pool.root.1
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas       529 Dec 17 02:05 boinc_task_state.xml
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas      1046 Dec 17 02:05 memory_monitor_summary.json
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas    407960 Dec 17 02:05 log.47898782._005320.job.log.tgz.1
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas        27 Dec 17 02:05 wrapper_checkpoint.txt
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 02:05 boinc_mmap_file
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas      7846 Dec 17 02:05 heartbeat.json
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas      4552 Dec 17 02:06 pilotlog.txt
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas    806826 Dec 17 02:06 log.47898782._005320.job.log.1
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas       357 Dec 17 02:06 output.list
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas       620 Dec 17 02:06 runtime_log
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas   1228800 Dec 17 02:06 result.tar.gz
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas      9344 Dec 17 02:06 runtime_log.err
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas       659 Dec 17 02:06 2mFNDmZBvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrbWKDmYoeFim.diag
[2025-12-17 02:06:11] -rw-r--r-- 1 boincer umatlas     22524 Dec 17 02:06 stderr.txt
[2025-12-17 02:06:11] HITS file was successfully produced:
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas 194283922 Dec 17 02:05 shared/HITS.pool.root.1
[2025-12-17 02:06:11]  *** Contents of shared directory: ***
[2025-12-17 02:06:11] total 398972
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas 212417859 Dec 17 00:31 ATLAS.root_0
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 17 00:31 start_atlas.sh
[2025-12-17 02:06:11] -rw-r--r-- 2 boincer umatlas    592393 Dec 17 00:31 input.tar.gz
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas 194283922 Dec 17 02:05 HITS.pool.root.1
[2025-12-17 02:06:11] -rw------- 1 boincer umatlas   1228800 Dec 17 02:06 result.tar.gz
02:06:13 (25061): run_atlas exited; CPU time 62432.859792
02:06:13 (25061): called boinc_finish(0)

</stderr_txt>
]]>

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