Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:47:35 (68055): wrapper (7.7.26015): starting
21:47:35 (68055): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 21:47:35] Arguments: --nthreads 12
[2025-12-16 21:47:35] Threads: 12
[2025-12-16 21:47:35] Checking for CVMFS
[2025-12-16 21:47:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:47:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:47:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:47:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:47:35] 2.11.5.0 1567383 23026 377136 154101 2 472 33192154 45568001 9402 130560 0 161989986 99.811 85275818 25119 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 21:47:35] CVMFS is ok
[2025-12-16 21:47:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:47:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:47:35] Further information can be found at the LHC@home message board.
[2025-12-16 21:47:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:47:35] Checking for apptainer binary...
[2025-12-16 21:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:47:35] Running /usr/bin/apptainer --version
[2025-12-16 21:47:35] apptainer version 1.4.1-1.el9
[2025-12-16 21:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:47:35] wns0081.triumf.lcg
[2025-12-16 21:47:35] apptainer works
[2025-12-16 21:47:35] Set ATHENA_PROC_NUMBER=12
[2025-12-16 21:47:35] Set ATHENA_CORE_NUMBER=12
[2025-12-16 21:47:35] Starting ATLAS job with PandaID=6931735794
[2025-12-16 21:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 21:50:53]  *** The last 200 lines of the pilot log: ***
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | found no stored workdir sizes
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | will not add max space = 0 B to job metrics
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | wrong length of table data, x=[1765950486.0], y=[1417.0] (must be same and length>=4)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . Timing measurements:
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . get job = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . initial setup = 2 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload setup = 4 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-in = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload execution = 14 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-out = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . log creation = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931735794/pilotlog.txt
[2025-12-16 21:50:53] 2025-12-17 05:50:21,524 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 21:50:53] - Log from pilotlog.txt -
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | found no stored workdir sizes
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | will not add max space = 0 B to job metrics
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | wrong length of table data, x=[1765950486.0], y=[1417.0] (must be same and length>=4)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . Timing measurements:
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . get job = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . initial setup = 2 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload setup = 4 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-in = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload execution = 14 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-out = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . log creation = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931735794/pilotlog.txt
[2025-12-16 21:50:53] 2025-12-17 05:50:21,525 | WARNING  | 
[2025-12-16 21:50:53] [begin log extracts]
[2025-12-16 21:50:53] - Log from pilotlog.txt -
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 21:50:53] 2025-12-17 05:50:21,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | found no stored workdir sizes
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | will not add max space = 0 B to job metrics
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | WARNING  | wrong length of table data, x=[1765950486.0], y=[1417.0] (must be same and length>=4)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . Timing measurements:
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . get job = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,515 | INFO     | . initial setup = 2 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload setup = 4 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-in = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . payload execution = 14 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . stage-out = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | . log creation = 0 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | ..............................
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 21:50:53] 2025-12-17 05:50:21,516 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931735794/pilotlog.txt
[2025-12-16 21:50:53] [end log extracts]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,525 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,526 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | 
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | job summary report
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | --------------------------------------------------
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | PanDA job id: 6931735794
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | task id: 47886831
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 21:48:12,546 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | pilot state: failed 
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | transexitcode: 65
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | exeerrorcode: 65
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | exitcode: 65
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | cpuconsumptiontime: 16 s
[2025-12-16 21:50:53] 2025-12-17 05:50:21,625 | INFO     | nevents: 0
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | neventsw: 0
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | pid: 79845
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | pgrp: 79845
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | corecount: 12
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | event service: False
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | sizes: {0: 2283990, 3: 2284252, 11: 2284280, 22: 2307400, 23: 2311696, 24: 2311696, 144: 2311990}
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | --------------------------------------------------
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | 
[2025-12-16 21:50:53] 2025-12-17 05:50:21,626 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 21:50:53] 2025-12-17 05:50:21,638 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,639 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | job 6931735794 has completed (purged errors)
[2025-12-16 21:50:53] 2025-12-17 05:50:21,640 | INFO     | overall cleanup function is called
[2025-12-16 21:50:53] 2025-12-17 05:50:22,648 | INFO     | --- collectZombieJob: --- 10, [79845]
[2025-12-16 21:50:53] 2025-12-17 05:50:22,648 | INFO     | zombie collector waiting for pid 79845
[2025-12-16 21:50:53] 2025-12-17 05:50:22,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 21:50:53] 2025-12-17 05:50:22,648 | INFO     | collected zombie processes
[2025-12-16 21:50:53] 2025-12-17 05:50:22,648 | INFO     | will attempt to kill all subprocesses of pid=79845
[2025-12-16 21:50:53] 2025-12-17 05:50:22,820 | INFO     | process IDs to be killed: [79845] (in reverse order)
[2025-12-16 21:50:53] 2025-12-17 05:50:22,882 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 21:50:53] 2025-12-17 05:50:22,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 21:50:53] 2025-12-17 05:50:22,890 | INFO     | did not find any defunct processes belonging to 79845
[2025-12-16 21:50:53] 2025-12-17 05:50:22,896 | INFO     | did not find any defunct processes belonging to 79845
[2025-12-16 21:50:53] 2025-12-17 05:50:22,896 | INFO     | ready for new job
[2025-12-16 21:50:53] 2025-12-17 05:50:22,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 21:50:53] 2025-12-17 05:50:22,897 | INFO     | ***************************************
[2025-12-16 21:50:53] 2025-12-17 05:50:22,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 21:50:53] 2025-12-17 05:50:22,897 | INFO     | ***************************************
[2025-12-16 21:50:53] 2025-12-17 05:50:22,898 | INFO     | 
[2025-12-16 21:50:53] 2025-12-17 05:50:22,899 | INFO     | architecture information:
[2025-12-16 21:50:53] 2025-12-17 05:50:22,900 | INFO     | executing command: cat /etc/os-release
[2025-12-16 21:50:53] 2025-12-17 05:50:22,909 | INFO     | cat /etc/os-release:
[2025-12-16 21:50:53] NAME="CentOS Linux"
[2025-12-16 21:50:53] VERSION="7 (Core)"
[2025-12-16 21:50:53] ID="centos"
[2025-12-16 21:50:53] ID_LIKE="rhel fedora"
[2025-12-16 21:50:53] VERSION_ID="7"
[2025-12-16 21:50:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 21:50:53] ANSI_COLOR="0;31"
[2025-12-16 21:50:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 21:50:53] HOME_URL="https://www.centos.org/"
[2025-12-16 21:50:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 21:50:53] 
[2025-12-16 21:50:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 21:50:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 21:50:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 21:50:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 21:50:53] 
[2025-12-16 21:50:53] 2025-12-17 05:50:22,910 | INFO     | ***************************************
[2025-12-16 21:50:53] 2025-12-17 05:50:23,412 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 21:50:53] 2025-12-17 05:50:23,422 | INFO     | sufficient remaining disk space (2087634075648 B)
[2025-12-16 21:50:53] 2025-12-17 05:50:23,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 21:50:53] 2025-12-17 05:50:23,422 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 21:50:53] 2025-12-17 05:50:23,422 | INFO     | update_server=False
[2025-12-16 21:50:53] 2025-12-17 05:50:23,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 21:50:53] 2025-12-17 05:50:23,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:50:53] 2025-12-17 05:50:23,482 | INFO     | all data control threads have been joined
[2025-12-16 21:50:53] 2025-12-17 05:50:23,789 | INFO     | all job control threads have been joined
[2025-12-16 21:50:53] 2025-12-17 05:50:23,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:50:53] 2025-12-17 05:50:23,995 | INFO     | aborting loop
[2025-12-16 21:50:53] 2025-12-17 05:50:24,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 21:50:53] 2025-12-17 05:50:24,428 | INFO     | [job] queue monitor thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,428 | INFO     | [job] retrieve thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,443 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,477 | INFO     | all payload control threads have been joined
[2025-12-16 21:50:53] 2025-12-17 05:50:24,487 | INFO     | [data] control thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,549 | INFO     | [payload] validate_post thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,713 | INFO     | [data] copytool_in thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,794 | INFO     | [job] control thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:24,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 21:50:53] 2025-12-17 05:50:25,000 | INFO     | [job] job monitor thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:25,122 | INFO     | [payload] failed_post thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:25,482 | INFO     | [payload] control thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:25,704 | INFO     | [job] validate thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:25,784 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:25,833 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:26,024 | INFO     | [data] copytool_out thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:28,959 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 21:50:53] 2025-12-17 05:50:43,529 | INFO     | [monitor] cgroup control has ended
[2025-12-16 21:50:53] 2025-12-17 05:50:45,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059675662144)>', '<ExcThread(monitor, started 140059000952576)>']
[2025-12-16 21:50:53] 2025-12-17 05:50:50,260 | INFO     | all workflow threads have been joined
[2025-12-16 21:50:53] 2025-12-17 05:50:50,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 21:50:53] 2025-12-17 05:50:50,260 | INFO     | traces error code: 0
[2025-12-16 21:50:53] 2025-12-17 05:50:50,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 21:50:53] 2025-12-17 05:50:53,454 | INFO     | PID=71815 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 21:50:53] 2025-12-17 05:50:53,454 | INFO     | .. there are 28 such processes running
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | CRITICAL | thread 'MainThread' is not alive
[2025-12-16 21:50:53] 2025-12-17 05:50:53,455 | INFO     | [monitor] control thread has ended
[2025-12-16 21:50:53] 2025-12-17 05:50:53,545 [wrapper] ==== pilot stdout END ====
[2025-12-16 21:50:53] 2025-12-17 05:50:53,547 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 21:50:53] 2025-12-17 05:50:53,549 [wrapper] pilotpid: 71815
[2025-12-16 21:50:53] 2025-12-17 05:50:53,551 [wrapper] Pilot exit status: 0
[2025-12-16 21:50:53] 2025-12-17 05:50:53,558 [wrapper] pandaids: 6931735794
[2025-12-16 21:50:53] 2025-12-17 05:50:53,600 [wrapper] cleanup supervisor_pilot   71821 71816
[2025-12-16 21:50:53] 2025-12-17 05:50:53,602 [wrapper] Test setup, not cleaning
[2025-12-16 21:50:53] 2025-12-17 05:50:53,604 [wrapper] apfmon messages muted
[2025-12-16 21:50:53] 2025-12-17 05:50:53,606 [wrapper] ==== wrapper stdout END ====
[2025-12-16 21:50:53] 2025-12-17 05:50:53,608 [wrapper] ==== wrapper stderr END ====
[2025-12-16 21:50:53]  *** Error codes and diagnostics ***
[2025-12-16 21:50:53]     "exeErrorCode": 65,
[2025-12-16 21:50:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 21:50:53]     "pilotErrorCode": 1305,
[2025-12-16 21:50:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 21:50:53]  *** Listing of results directory ***
[2025-12-16 21:50:53] total 190080
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc    579449 Dec 16 17:05 pilot3.tar.gz
[2025-12-16 21:50:53] -rwx------. 1 boinc boinc     36322 Dec 16 17:06 runpilot2-wrapper.sh
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc      5112 Dec 16 17:07 queuedata.json
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc       100 Dec 16 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 21:50:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 21:47 run_atlas
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc       105 Dec 16 21:47 job.xml
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc      6595 Dec 16 21:47 init_data.xml
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc 190522858 Dec 16 21:47 EVNT.47886829._000672.pool.root.1
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc     15847 Dec 16 21:47 start_atlas.sh
[2025-12-16 21:50:53] drwxrwx--x. 2 boinc boinc      4096 Dec 16 21:47 shared
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc    592414 Dec 16 21:47 input.tar.gz
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc         0 Dec 16 21:47 boinc_lockfile
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc      2539 Dec 16 21:47 pandaJob.out
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc    987409 Dec 16 21:47 agis_schedconf.cvmfs.json
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc   1516240 Dec 16 21:47 agis_ddmendpoints.agis.ALL.json
[2025-12-16 21:50:53] drwx------. 5 boinc boinc      4096 Dec 16 21:47 pilot3
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc       951 Dec 16 21:48 memory_monitor_summary.json
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc     20995 Dec 16 21:48 log.47886831._016828.job.log.tgz.1
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc      8392 Dec 16 21:50 heartbeat.json
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc      8192 Dec 16 21:50 boinc_mmap_file
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc        22 Dec 16 21:50 wrapper_checkpoint.txt
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc       523 Dec 16 21:50 boinc_task_state.xml
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc       891 Dec 16 21:50 pilotlog.txt
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc        95 Dec 16 21:50 pilot_heartbeat.json
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc     82024 Dec 16 21:50 log.47886831._016828.job.log.1
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc       188 Dec 16 21:50 output.list
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc       620 Dec 16 21:50 runtime_log
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc    122880 Dec 16 21:50 result.tar.gz
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc      8636 Dec 16 21:50 runtime_log.err
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc       644 Dec 16 21:50 QvALDmEBvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVYWKDmKNo4nm.diag
[2025-12-16 21:50:53] -rw-r--r--. 1 boinc boinc     21602 Dec 16 21:50 stderr.txt
[2025-12-16 21:50:53] No HITS result produced
[2025-12-16 21:50:53]  *** Contents of shared directory: ***
[2025-12-16 21:50:53] total 186780
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc 190522858 Dec 16 21:47 ATLAS.root_0
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc     15847 Dec 16 21:47 start_atlas.sh
[2025-12-16 21:50:53] -rw-r--r--. 2 boinc boinc    592414 Dec 16 21:47 input.tar.gz
[2025-12-16 21:50:53] -rw-------. 1 boinc boinc    122880 Dec 16 21:50 result.tar.gz
21:50:55 (68055): run_atlas exited; CPU time 19.769390
21:50:55 (68055): called boinc_finish(0)

</stderr_txt>
]]>

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