Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:06 (1723877): wrapper (7.7.26015): starting
00:12:06 (1723877): wrapper: running run_atlas (--nthreads 9)
[2025-12-17 00:12:06] Arguments: --nthreads 9
[2025-12-17 00:12:06] Threads: 9
[2025-12-17 00:12:06] Checking for CVMFS
[2025-12-17 00:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:12:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:12:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:12:07] 2.13.3.0 12601 59854 357216 154100 2 105 27510896 32935937 32036 16776704 0 281683967 99.458 381262873 32792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:12:07] CVMFS is ok
[2025-12-17 00:12:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:12:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:12:07] Further information can be found at the LHC@home message board.
[2025-12-17 00:12:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:12:07] Checking for apptainer binary...
[2025-12-17 00:12:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:12:07] Running /usr/bin/apptainer --version
[2025-12-17 00:12:08] apptainer version 1.4.5-2.el9
[2025-12-17 00:12:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:12:08] c6-12-27-4.aglt2.org
[2025-12-17 00:12:08] apptainer works
[2025-12-17 00:12:08] Set ATHENA_PROC_NUMBER=9
[2025-12-17 00:12:08] Set ATHENA_CORE_NUMBER=9
[2025-12-17 00:12:08] Starting ATLAS job with PandaID=6931735481
[2025-12-17 00:12:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:41:06]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:41:06] 2025-12-17 10:40:06,293 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2590.2059062499998
[2025-12-17 05:41:06] 2025-12-17 10:40:06,403 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6931735481/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,404 | INFO     | extracted standard info from prmon json
[2025-12-17 05:41:06] 2025-12-17 10:40:06,404 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:41:06] 2025-12-17 10:40:06,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:41:06] 2025-12-17 10:40:06,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:41:06] 2025-12-17 10:40:06,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:41:06] 2025-12-17 10:40:06,439 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:41:06] 2025-12-17 10:40:06,440 | INFO     | sum of square deviations: 9971119701.320807
[2025-12-17 05:41:06] 2025-12-17 10:40:06,466 | INFO     | sum of deviations: 112721915132.94327
[2025-12-17 05:41:06] 2025-12-17 10:40:06,466 | INFO     | mean x: 1765958244.3396227
[2025-12-17 05:41:06] 2025-12-17 10:40:06,466 | INFO     | mean y: 2472255.3616352202
[2025-12-17 05:41:06] 2025-12-17 10:40:06,466 | INFO     | intersect: -19961403548.917797
[2025-12-17 05:41:06] 2025-12-17 10:40:06,467 | INFO     | chi2: 4.711005134578976
[2025-12-17 05:41:06] 2025-12-17 10:40:06,467 | INFO     | sum of square deviations: 9508128936.012762
[2025-12-17 05:41:06] 2025-12-17 10:40:06,488 | INFO     | sum of deviations: 133152102838.60072
[2025-12-17 05:41:06] 2025-12-17 10:40:06,488 | INFO     | mean x: 1765958091.8402555
[2025-12-17 05:41:06] 2025-12-17 10:40:06,488 | INFO     | mean y: 2478891.4920127797
[2025-12-17 05:41:06] 2025-12-17 10:40:06,488 | INFO     | intersect: -24728047486.075108
[2025-12-17 05:41:06] 2025-12-17 10:40:06,489 | INFO     | chi2: 3.8739019473121177
[2025-12-17 05:41:06] 2025-12-17 10:40:06,489 | INFO     | current chi2=3.8739019473121177 (change=17.769099445943827 %)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,489 | INFO     | right removable region: 312
[2025-12-17 05:41:06] 2025-12-17 10:40:06,490 | INFO     | sum of square deviations: 9508043535.239609
[2025-12-17 05:41:06] 2025-12-17 10:40:06,526 | INFO     | sum of deviations: 18560816878.2652
[2025-12-17 05:41:06] 2025-12-17 10:40:06,543 | INFO     | mean x: 1765958396.8530352
[2025-12-17 05:41:06] 2025-12-17 10:40:06,543 | INFO     | mean y: 2503220.984025559
[2025-12-17 05:41:06] 2025-12-17 10:40:06,543 | INFO     | intersect: -3444854828.770419
[2025-12-17 05:41:06] 2025-12-17 10:40:06,544 | INFO     | chi2: 1.4154303068840774
[2025-12-17 05:41:06] 2025-12-17 10:40:06,544 | INFO     | current chi2=1.4154303068840774 (change=69.95481290192703 %)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,545 | INFO     | sum of square deviations: 9059564212.996798
[2025-12-17 05:41:06] 2025-12-17 10:40:06,570 | INFO     | sum of deviations: -15038814188.574669
[2025-12-17 05:41:06] 2025-12-17 10:40:06,570 | INFO     | mean x: 1765958549.3603897
[2025-12-17 05:41:06] 2025-12-17 10:40:06,570 | INFO     | mean y: 2514623.788961039
[2025-12-17 05:41:06] 2025-12-17 10:40:06,570 | INFO     | intersect: 2933993651.2741823
[2025-12-17 05:41:06] 2025-12-17 10:40:06,571 | INFO     | chi2: 0.9988719433452794
[2025-12-17 05:41:06] 2025-12-17 10:40:06,571 | INFO     | current chi2=0.9988719433452794 (change=29.42980389163829 %)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,572 | INFO     | sum of square deviations: 8625447830.178223
[2025-12-17 05:41:06] 2025-12-17 10:40:06,595 | INFO     | time since job start (19602s) is within the limit (174528.0s)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,598 | INFO     | sum of deviations: -31517285636.801975
[2025-12-17 05:41:06] 2025-12-17 10:40:06,598 | INFO     | mean x: 1765958701.861386
[2025-12-17 05:41:06] 2025-12-17 10:40:06,599 | INFO     | mean y: 2520404.290429043
[2025-12-17 05:41:06] 2025-12-17 10:40:06,599 | INFO     | intersect: 6455312876.65662
[2025-12-17 05:41:06] 2025-12-17 10:40:06,630 | INFO     | chi2: 0.8919165730639861
[2025-12-17 05:41:06] 2025-12-17 10:40:06,631 | INFO     | current chi2=0.8919165730639861 (change=10.707615825417385 %)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,631 | INFO     | left removable region: 30
[2025-12-17 05:41:06] 2025-12-17 10:40:06,631 | INFO     | sum of square deviations: 6953359888.826268
[2025-12-17 05:41:06] 2025-12-17 10:40:06,634 | INFO     | sum of deviations: -6989660231.7234125
[2025-12-17 05:41:06] 2025-12-17 10:40:06,634 | INFO     | mean x: 1765958976.358156
[2025-12-17 05:41:06] 2025-12-17 10:40:06,653 | INFO     | mean y: 2527056.5319148935
[2025-12-17 05:41:06] 2025-12-17 10:40:06,653 | INFO     | intersect: 1777705304.9267597
[2025-12-17 05:41:06] 2025-12-17 10:40:06,654 | INFO     | chi2: 0.01793150089074289
[2025-12-17 05:41:06] 2025-12-17 10:40:06,654 | INFO     | current memory leak: -1.01 B/s (using 282 data points, chi2=0.02)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,655 | INFO     | could have reported an average CPU frequency of 2639 MHz (14 samples)
[2025-12-17 05:41:06] 2025-12-17 10:40:06,655 | INFO     | ..............................
[2025-12-17 05:41:06] 2025-12-17 10:40:06,655 | INFO     | . Timing measurements:
[2025-12-17 05:41:06] 2025-12-17 10:40:06,655 | INFO     | . get job = 0 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,655 | INFO     | . initial setup = 9 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | . payload setup = 47 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | . stage-in = 0 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | . payload execution = 19428 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | . stage-out = 4 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | . log creation = 0 s
[2025-12-17 05:41:06] 2025-12-17 10:40:06,656 | INFO     | ..............................
[2025-12-17 05:41:06] 2025-12-17 10:40:07,186 | INFO     | 
[2025-12-17 05:41:06] 2025-12-17 10:40:07,186 | INFO     | job summary report
[2025-12-17 05:41:06] 2025-12-17 10:40:07,186 | INFO     | --------------------------------------------------
[2025-12-17 05:41:06] 2025-12-17 10:40:07,186 | INFO     | PanDA job id: 6931735481
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | task id: 47886933
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | errors: (none)
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | pilot state: finished 
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | transexitcode: 0
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | exeerrorcode: 0
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | exeerrordiag: 
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | exitcode: 0
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | exitmsg: OK
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | cpuconsumptiontime: 46348 s
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | nevents: 400
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | neventsw: 0
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | pid: 1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:07,187 | INFO     | pgrp: 1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | corecount: 9
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | event service: False
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | sizes: {0: 2283137, 1: 2283822, 2: 2283850, 3: 2284021, 5: 2284049, 16: 2284105, 27: 2284261, 39: 2284579, 50: 2284579, 19480: 2317176, 19481: 2317175, 19486: 2326
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | --------------------------------------------------
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | 
[2025-12-17 05:41:06] 2025-12-17 10:40:07,188 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-12-17 05:41:06] 2025-12-17 10:40:07,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:41:06] 2025-12-17 10:40:07,298 | INFO     | job 6931735481 has completed (purged errors)
[2025-12-17 05:41:06] 2025-12-17 10:40:07,299 | INFO     | overall cleanup function is called
[2025-12-17 05:41:06] 2025-12-17 10:40:08,326 | INFO     | --- collectZombieJob: --- 10, [1778410]
[2025-12-17 05:41:06] 2025-12-17 10:40:08,326 | INFO     | zombie collector waiting for pid 1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:08,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:41:06] 2025-12-17 10:40:08,327 | INFO     | collected zombie processes
[2025-12-17 05:41:06] 2025-12-17 10:40:08,327 | INFO     | will attempt to kill all subprocesses of pid=1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:09,415 | INFO     | process IDs to be killed: [1778410] (in reverse order)
[2025-12-17 05:41:06] 2025-12-17 10:40:09,644 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:41:06] 2025-12-17 10:40:09,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:41:06] 2025-12-17 10:40:09,669 | INFO     | did not find any defunct processes belonging to 1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:09,709 | INFO     | did not find any defunct processes belonging to 1778410
[2025-12-17 05:41:06] 2025-12-17 10:40:09,709 | INFO     | ready for new job
[2025-12-17 05:41:06] 2025-12-17 10:40:09,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:41:06] 2025-12-17 10:40:09,716 | INFO     | ***************************************
[2025-12-17 05:41:06] 2025-12-17 10:40:09,716 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:41:06] 2025-12-17 10:40:09,717 | INFO     | ***************************************
[2025-12-17 05:41:06] 2025-12-17 10:40:09,717 | INFO     | 
[2025-12-17 05:41:06] 2025-12-17 10:40:09,730 | INFO     | architecture information:
[2025-12-17 05:41:06] 2025-12-17 10:40:09,731 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:41:06] 2025-12-17 10:40:09,772 | INFO     | cat /etc/os-release:
[2025-12-17 05:41:06] NAME="CentOS Linux"
[2025-12-17 05:41:06] VERSION="7 (Core)"
[2025-12-17 05:41:06] ID="centos"
[2025-12-17 05:41:06] ID_LIKE="rhel fedora"
[2025-12-17 05:41:06] VERSION_ID="7"
[2025-12-17 05:41:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:41:06] ANSI_COLOR="0;31"
[2025-12-17 05:41:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:41:06] HOME_URL="https://www.centos.org/"
[2025-12-17 05:41:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:41:06] 
[2025-12-17 05:41:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:41:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:41:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:41:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:41:06] 
[2025-12-17 05:41:06] 2025-12-17 10:40:09,772 | INFO     | ***************************************
[2025-12-17 05:41:06] 2025-12-17 10:40:10,275 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-12-17 05:41:06] 2025-12-17 10:40:10,321 | INFO     | sufficient remaining disk space (94280613888 B)
[2025-12-17 05:41:06] 2025-12-17 10:40:10,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:41:06] 2025-12-17 10:40:10,322 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:41:06] 2025-12-17 10:40:10,322 | INFO     | update_server=False
[2025-12-17 05:41:06] 2025-12-17 10:40:10,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:41:06] 2025-12-17 10:40:10,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:41:06] 2025-12-17 10:40:10,372 | INFO     | all payload control threads have been joined
[2025-12-17 05:41:06] 2025-12-17 10:40:10,536 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 05:41:06] 2025-12-17 10:40:10,536 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 05:41:06] 2025-12-17 10:40:10,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:41:06] 2025-12-17 10:40:10,537 | INFO     | will abort loop
[2025-12-17 05:41:06] 2025-12-17 10:40:10,679 | INFO     | all data control threads have been joined
[2025-12-17 05:41:06] 2025-12-17 10:40:11,239 | INFO     | all job control threads have been joined
[2025-12-17 05:41:06] 2025-12-17 10:40:11,328 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,377 | INFO     | [payload] control thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,542 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,669 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,685 | INFO     | [data] control thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,840 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,894 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:11,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:41:06] 2025-12-17 10:40:12,161 | INFO     | [job] validate thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,172 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,245 | INFO     | [job] control thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,276 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,330 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,819 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:12,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:41:06] 2025-12-17 10:40:12,939 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:16,845 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:41:06] 2025-12-17 10:40:41,232 | INFO     | PID=1736463 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:41:06] 2025-12-17 10:40:41,232 | INFO     | .. there are 31 such processes running
[2025-12-17 05:41:06] 2025-12-17 10:40:41,233 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:41:06] 2025-12-17 10:40:41,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:41:06] 2025-12-17 10:40:41,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:41:06] 2025-12-17 10:40:58,954 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:41:06] 2025-12-17 10:41:00,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184699086656)>', '<ExcThread(monitor, started 140183697614592)>']
[2025-12-17 05:41:06] 2025-12-17 10:41:01,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:41:06] 2025-12-17 10:41:01,358 | INFO     | [monitor] control thread has ended
[2025-12-17 05:41:06] 2025-12-17 10:41:05,454 | INFO     | all workflow threads have been joined
[2025-12-17 05:41:06] 2025-12-17 10:41:05,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:41:06] 2025-12-17 10:41:05,455 | INFO     | traces error code: 0
[2025-12-17 05:41:06] 2025-12-17 10:41:05,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:41:06] 2025-12-17 10:41:05,752 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:41:06] 2025-12-17 10:41:05,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:41:06] 2025-12-17 10:41:05,770 [wrapper] pilotpid: 1736463
[2025-12-17 05:41:06] 2025-12-17 10:41:05,773 [wrapper] Pilot exit status: 0
[2025-12-17 05:41:06] 2025-12-17 10:41:05,834 [wrapper] pandaids: 6931735481
[2025-12-17 05:41:06] 2025-12-17 10:41:05,941 [wrapper] cleanup supervisor_pilot 2934176 1736464
[2025-12-17 05:41:06] 2025-12-17 10:41:05,945 [wrapper] Test setup, not cleaning
[2025-12-17 05:41:06] 2025-12-17 10:41:05,948 [wrapper] apfmon messages muted
[2025-12-17 05:41:06] 2025-12-17 10:41:05,951 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:41:06] 2025-12-17 10:41:05,953 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:41:06]  *** Error codes and diagnostics ***
[2025-12-17 05:41:06]     "exeErrorCode": 0,
[2025-12-17 05:41:06]     "exeErrorDiag": "",
[2025-12-17 05:41:06]     "pilotErrorCode": 0,
[2025-12-17 05:41:06]     "pilotErrorDiag": "",
[2025-12-17 05:41:06]  *** Listing of results directory ***
[2025-12-17 05:41:06] total 342300
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 20:05 pilot3.tar.gz
[2025-12-17 05:41:06] -rwx------. 1 boincer umatlas     36322 Dec 16 20:06 runpilot2-wrapper.sh
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 20:07 queuedata.json
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:41:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:12 run_atlas
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:12 job.xml
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas 193816099 Dec 17 00:12 EVNT.47886929._000338.pool.root.1
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:12 start_atlas.sh
[2025-12-17 05:41:06] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:12 shared
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas    592400 Dec 17 00:12 input.tar.gz
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:12 boinc_lockfile
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas      2513 Dec 17 00:12 pandaJob.out
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas        57 Dec 17 00:12 setup.sh.local
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas    987409 Dec 17 00:13 agis_schedconf.cvmfs.json
[2025-12-17 05:41:06] drwx------. 5 boincer umatlas      4096 Dec 17 00:13 pilot3
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas      6879 Dec 17 05:36 init_data.xml
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas 147011136 Dec 17 05:38 HITS.47886933._008271.pool.root.1
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas       531 Dec 17 05:38 boinc_task_state.xml
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas      1054 Dec 17 05:39 memory_monitor_summary.json
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas   1516240 Dec 17 05:39 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas    522559 Dec 17 05:39 log.47886933._008271.job.log.tgz.1
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas      7828 Dec 17 05:40 heartbeat.json
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas        95 Dec 17 05:40 pilot_heartbeat.json
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas        28 Dec 17 05:41 wrapper_checkpoint.txt
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 05:41 boinc_mmap_file
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas      5010 Dec 17 05:41 pilotlog.txt
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas   2362670 Dec 17 05:41 log.47886933._008271.job.log.1
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas       357 Dec 17 05:41 output.list
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas       620 Dec 17 05:41 runtime_log
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas   2908160 Dec 17 05:41 result.tar.gz
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas      9353 Dec 17 05:41 runtime_log.err
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas       657 Dec 17 05:41 mXoMDmOBvp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDZWKDmtJ6mEm.diag
[2025-12-17 05:41:06] -rw-r--r--. 1 boincer umatlas     21248 Dec 17 05:41 stderr.txt
[2025-12-17 05:41:06] HITS file was successfully produced:
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas 147011136 Dec 17 05:38 shared/HITS.pool.root.1
[2025-12-17 05:41:06]  *** Contents of shared directory: ***
[2025-12-17 05:41:06] total 336284
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas 193816099 Dec 17 00:12 ATLAS.root_0
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:12 start_atlas.sh
[2025-12-17 05:41:06] -rw-r--r--. 2 boincer umatlas    592400 Dec 17 00:12 input.tar.gz
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas 147011136 Dec 17 05:38 HITS.pool.root.1
[2025-12-17 05:41:06] -rw-------. 1 boincer umatlas   2908160 Dec 17 05:41 result.tar.gz
05:41:07 (1723877): run_atlas exited; CPU time 47215.133487
05:41:07 (1723877): called boinc_finish(0)

</stderr_txt>
]]>

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