Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:45 (2372531): wrapper (7.7.26015): starting
00:04:45 (2372531): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:04:45] Arguments: --nthreads 12
[2025-12-17 00:04:45] Threads: 12
[2025-12-17 00:04:45] Checking for CVMFS
[2025-12-17 00:04:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:04:45] 2.13.3.0 11314 59847 254960 154099 2 894 32911186 32935937 33662 16776704 0 529617537 99.598 568321655 34383 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:04:45] CVMFS is ok
[2025-12-17 00:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:04:45] Further information can be found at the LHC@home message board.
[2025-12-17 00:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:04:45] Checking for apptainer binary...
[2025-12-17 00:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:04:45] Running /usr/bin/apptainer --version
[2025-12-17 00:04:46] apptainer version 1.4.5-2.el9
[2025-12-17 00:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:04:46] c7-2-10.aglt2.org
[2025-12-17 00:04:46] apptainer works
[2025-12-17 00:04:46] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:04:46] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:04:46] Starting ATLAS job with PandaID=6931011832
[2025-12-17 00:04:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:42:34]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:42:34] 2025-12-17 08:41:46,781 | INFO     | time since job start (13001s) is within the limit (174528.0s)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,547 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 03:42:34] 2025-12-17 08:41:47,562 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3175.160958333334
[2025-12-17 03:42:34] 2025-12-17 08:41:47,584 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6931011832/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,585 | INFO     | extracted standard info from prmon json
[2025-12-17 03:42:34] 2025-12-17 08:41:47,585 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 03:42:34] 2025-12-17 08:41:47,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 03:42:34] 2025-12-17 08:41:47,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 03:42:34] 2025-12-17 08:41:47,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 03:42:34] 2025-12-17 08:41:47,589 | INFO     | fitting pss+swap vs Time
[2025-12-17 03:42:34] 2025-12-17 08:41:47,590 | INFO     | sum of square deviations: 2996537088.769971
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | sum of deviations: 79204995380.91553
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | mean x: 1765954416.3004694
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | mean y: 2575110.8450704226
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | intersect: -46675442628.42522
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | chi2: 4.068337321300772
[2025-12-17 03:42:34] 2025-12-17 08:41:47,591 | INFO     | sum of square deviations: 2790450418.3076954
[2025-12-17 03:42:34] 2025-12-17 08:41:47,592 | INFO     | sum of deviations: 91639982856.57687
[2025-12-17 03:42:34] 2025-12-17 08:41:47,592 | INFO     | mean x: 1765954263.8076923
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | mean y: 2584111.014423077
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | intersect: -57992360862.41423
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | chi2: 3.361924240424661
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | current chi2=3.361924240424661 (change=17.36368017414665 %)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | right removable region: 207
[2025-12-17 03:42:34] 2025-12-17 08:41:47,593 | INFO     | sum of square deviations: 2790411378.3076954
[2025-12-17 03:42:34] 2025-12-17 08:41:47,594 | INFO     | sum of deviations: 22529024607.846153
[2025-12-17 03:42:34] 2025-12-17 08:41:47,594 | INFO     | mean x: 1765954568.8076923
[2025-12-17 03:42:34] 2025-12-17 08:41:47,594 | INFO     | mean y: 2616859.596153846
[2025-12-17 03:42:34] 2025-12-17 08:41:47,594 | INFO     | intersect: -14255221338.13061
[2025-12-17 03:42:34] 2025-12-17 08:41:47,595 | INFO     | chi2: 1.4163209977328637
[2025-12-17 03:42:34] 2025-12-17 08:41:47,595 | INFO     | current chi2=1.4163209977328637 (change=65.18673635252983 %)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,595 | INFO     | sum of square deviations: 2593960267.822662
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | sum of deviations: -2148570803.9753647
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | mean x: 1765954721.315271
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | mean y: 2635999.7339901477
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | intersect: 1465371879.8580575
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | chi2: 0.9797351212689915
[2025-12-17 03:42:34] 2025-12-17 08:41:47,596 | INFO     | current chi2=0.9797351212689915 (change=30.825348008165154 %)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,597 | INFO     | sum of square deviations: 2406951194.813114
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | sum of deviations: -16529000045.222221
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | mean x: 1765954873.8232324
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | mean y: 2647715.222222222
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | intersect: 12129801872.808289
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | chi2: 0.8117486439438321
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | current chi2=0.8117486439438321 (change=17.14611160489753 %)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | left removable region: 30
[2025-12-17 03:42:34] 2025-12-17 08:41:47,598 | INFO     | sum of square deviations: 1719418514.8587508
[2025-12-17 03:42:34] 2025-12-17 08:41:47,599 | INFO     | sum of deviations: -10778519856.44633
[2025-12-17 03:42:34] 2025-12-17 08:41:47,599 | INFO     | mean x: 1765955148.3615818
[2025-12-17 03:42:34] 2025-12-17 08:41:47,599 | INFO     | mean y: 2666710.02259887
[2025-12-17 03:42:34] 2025-12-17 08:41:47,599 | INFO     | intersect: 11072910788.307747
[2025-12-17 03:42:34] 2025-12-17 08:41:47,600 | INFO     | chi2: 0.010342154346167715
[2025-12-17 03:42:34] 2025-12-17 08:41:47,600 | INFO     | current memory leak: -6.27 B/s (using 177 data points, chi2=0.01)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,600 | INFO     | could have reported an average CPU frequency of 3171 MHz (11 samples)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,600 | INFO     | ..............................
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . Timing measurements:
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . get job = 0 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . initial setup = 2 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . payload setup = 12 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . stage-in = 0 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . payload execution = 12949 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . stage-out = 2 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | . log creation = 0 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,601 | INFO     | ..............................
[2025-12-17 03:42:34] 2025-12-17 08:41:47,672 | INFO     | 
[2025-12-17 03:42:34] 2025-12-17 08:41:47,672 | INFO     | job summary report
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | --------------------------------------------------
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | PanDA job id: 6931011832
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | task id: 47886831
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | errors: (none)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | pilot state: finished 
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | transexitcode: 0
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | exeerrorcode: 0
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | exeerrordiag: 
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | exitcode: 0
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | exitmsg: OK
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | cpuconsumptiontime: 35391 s
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | nevents: 400
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | neventsw: 0
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | pid: 2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | pgrp: 2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:47,673 | INFO     | corecount: 12
[2025-12-17 03:42:34] 2025-12-17 08:41:47,674 | INFO     | event service: False
[2025-12-17 03:42:34] 2025-12-17 08:41:47,674 | INFO     | sizes: {0: 2283993, 10: 2284255, 11: 2284283, 12966: 2314464, 12969: 2323462, 12971: 2323518, 12982: 2323840}
[2025-12-17 03:42:34] 2025-12-17 08:41:47,674 | INFO     | --------------------------------------------------
[2025-12-17 03:42:34] 2025-12-17 08:41:47,674 | INFO     | 
[2025-12-17 03:42:34] 2025-12-17 08:41:47,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-12-17 03:42:34] 2025-12-17 08:41:47,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 03:42:34] 2025-12-17 08:41:47,725 | INFO     | job 6931011832 has completed (purged errors)
[2025-12-17 03:42:34] 2025-12-17 08:41:47,725 | INFO     | overall cleanup function is called
[2025-12-17 03:42:34] 2025-12-17 08:41:48,735 | INFO     | --- collectZombieJob: --- 10, [2420243]
[2025-12-17 03:42:34] 2025-12-17 08:41:48,736 | INFO     | zombie collector waiting for pid 2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:48,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 03:42:34] 2025-12-17 08:41:48,736 | INFO     | collected zombie processes
[2025-12-17 03:42:34] 2025-12-17 08:41:48,736 | INFO     | will attempt to kill all subprocesses of pid=2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:49,415 | INFO     | process IDs to be killed: [2420243] (in reverse order)
[2025-12-17 03:42:34] 2025-12-17 08:41:49,604 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 03:42:34] 2025-12-17 08:41:49,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 03:42:34] 2025-12-17 08:41:49,629 | INFO     | did not find any defunct processes belonging to 2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:49,654 | INFO     | did not find any defunct processes belonging to 2420243
[2025-12-17 03:42:34] 2025-12-17 08:41:49,655 | INFO     | ready for new job
[2025-12-17 03:42:34] 2025-12-17 08:41:49,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 03:42:34] 2025-12-17 08:41:49,657 | INFO     | ***************************************
[2025-12-17 03:42:34] 2025-12-17 08:41:49,657 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 03:42:34] 2025-12-17 08:41:49,657 | INFO     | ***************************************
[2025-12-17 03:42:34] 2025-12-17 08:41:49,657 | INFO     | 
[2025-12-17 03:42:34] 2025-12-17 08:41:49,661 | INFO     | architecture information:
[2025-12-17 03:42:34] 2025-12-17 08:41:49,662 | INFO     | executing command: cat /etc/os-release
[2025-12-17 03:42:34] 2025-12-17 08:41:49,676 | INFO     | cat /etc/os-release:
[2025-12-17 03:42:34] NAME="CentOS Linux"
[2025-12-17 03:42:34] VERSION="7 (Core)"
[2025-12-17 03:42:34] ID="centos"
[2025-12-17 03:42:34] ID_LIKE="rhel fedora"
[2025-12-17 03:42:34] VERSION_ID="7"
[2025-12-17 03:42:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 03:42:34] ANSI_COLOR="0;31"
[2025-12-17 03:42:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 03:42:34] HOME_URL="https://www.centos.org/"
[2025-12-17 03:42:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 03:42:34] 
[2025-12-17 03:42:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 03:42:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 03:42:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 03:42:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 03:42:34] 
[2025-12-17 03:42:34] 2025-12-17 08:41:49,677 | INFO     | ***************************************
[2025-12-17 03:42:34] 2025-12-17 08:41:50,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-12-17 03:42:34] 2025-12-17 08:41:50,221 | INFO     | sufficient remaining disk space (74187800576 B)
[2025-12-17 03:42:34] 2025-12-17 08:41:50,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:42:34] 2025-12-17 08:41:50,221 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:42:34] 2025-12-17 08:41:50,221 | INFO     | update_server=False
[2025-12-17 03:42:34] 2025-12-17 08:41:50,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:42:34] 2025-12-17 08:41:50,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:42:34] 2025-12-17 08:41:50,286 | INFO     | aborting loop
[2025-12-17 03:42:34] 2025-12-17 08:41:50,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:42:34] 2025-12-17 08:41:50,761 | INFO     | all payload control threads have been joined
[2025-12-17 03:42:34] 2025-12-17 08:41:50,762 | INFO     | all data control threads have been joined
[2025-12-17 03:42:34] 2025-12-17 08:41:51,226 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:51,232 | INFO     | all job control threads have been joined
[2025-12-17 03:42:34] 2025-12-17 08:41:51,290 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:51,767 | INFO     | [payload] control thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:51,775 | INFO     | [data] control thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:51,940 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,032 | INFO     | [job] validate thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,155 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,160 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,182 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,237 | INFO     | [job] control thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,274 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,316 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,397 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:52,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:42:34] 2025-12-17 08:41:52,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:42:34] 2025-12-17 08:41:53,735 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:41:56,587 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:42:34] 2025-12-17 08:42:18,873 | INFO     | 13006s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 03:42:34] 2025-12-17 08:42:20,623 | INFO     | PID=2383015 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 03:42:34] 2025-12-17 08:42:20,623 | INFO     | .. there are 43 such processes running
[2025-12-17 03:42:34] 2025-12-17 08:42:20,624 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:42:34] 2025-12-17 08:42:20,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:42:34] 2025-12-17 08:42:20,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:42:34] 2025-12-17 08:42:27,616 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:42:34] 2025-12-17 08:42:28,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727061907264)>', '<ExcThread(monitor, started 139726216488704)>']
[2025-12-17 03:42:34] 2025-12-17 08:42:28,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:42:34] 2025-12-17 08:42:28,681 | INFO     | [monitor] control thread has ended
[2025-12-17 03:42:34] 2025-12-17 08:42:33,647 | INFO     | all workflow threads have been joined
[2025-12-17 03:42:34] 2025-12-17 08:42:33,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:42:34] 2025-12-17 08:42:33,648 | INFO     | traces error code: 0
[2025-12-17 03:42:34] 2025-12-17 08:42:33,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:42:34] 2025-12-17 08:42:33,896 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:42:34] 2025-12-17 08:42:33,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:42:34] 2025-12-17 08:42:33,904 [wrapper] pilotpid: 2383015
[2025-12-17 03:42:34] 2025-12-17 08:42:33,914 [wrapper] Pilot exit status: 0
[2025-12-17 03:42:34] 2025-12-17 08:42:33,941 [wrapper] pandaids: 6931011832
[2025-12-17 03:42:34] 2025-12-17 08:42:34,106 [wrapper] cleanup supervisor_pilot  912845 2383016
[2025-12-17 03:42:34] 2025-12-17 08:42:34,111 [wrapper] Test setup, not cleaning
[2025-12-17 03:42:34] 2025-12-17 08:42:34,114 [wrapper] apfmon messages muted
[2025-12-17 03:42:34] 2025-12-17 08:42:34,116 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:42:34] 2025-12-17 08:42:34,119 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:42:34]  *** Error codes and diagnostics ***
[2025-12-17 03:42:34]     "exeErrorCode": 0,
[2025-12-17 03:42:34]     "exeErrorDiag": "",
[2025-12-17 03:42:34]     "pilotErrorCode": 0,
[2025-12-17 03:42:34]     "pilotErrorDiag": "",
[2025-12-17 03:42:34]  *** Listing of results directory ***
[2025-12-17 03:42:34] total 338636
[2025-12-17 03:42:34] -rwx------. 1 boincer umatlas     36322 Dec 16 04:01 runpilot2-wrapper.sh
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 04:01 queuedata.json
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 04:01 pilot3.tar.gz
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:42:34] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:04 run_atlas
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:04 job.xml
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas 193287900 Dec 17 00:04 EVNT.47886829._000535.pool.root.1
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:04 start_atlas.sh
[2025-12-17 03:42:34] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:04 shared
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas    592403 Dec 17 00:04 input.tar.gz
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:04 boinc_lockfile
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 00:04 pandaJob.out
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas        57 Dec 17 00:04 setup.sh.local
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas    987409 Dec 17 00:05 agis_schedconf.cvmfs.json
[2025-12-17 03:42:34] drwx------. 5 boincer umatlas      4096 Dec 17 00:05 pilot3
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas      6944 Dec 17 03:38 init_data.xml
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas 145173804 Dec 17 03:41 HITS.47886831._013072.pool.root.1
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas       530 Dec 17 03:41 boinc_task_state.xml
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas      1048 Dec 17 03:41 memory_monitor_summary.json
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas   1516240 Dec 17 03:41 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas    511778 Dec 17 03:41 log.47886831._013072.job.log.tgz.1
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas      7803 Dec 17 03:41 heartbeat.json
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas        95 Dec 17 03:42 pilot_heartbeat.json
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas      4940 Dec 17 03:42 pilotlog.txt
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas        28 Dec 17 03:42 wrapper_checkpoint.txt
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 03:42 boinc_mmap_file
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas   1683512 Dec 17 03:42 log.47886831._013072.job.log.1
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas       357 Dec 17 03:42 output.list
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas       620 Dec 17 03:42 runtime_log
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas   2211840 Dec 17 03:42 result.tar.gz
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas      9340 Dec 17 03:42 runtime_log.err
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas       658 Dec 17 03:42 I8FNDml6fp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkiZKDmr4AnHn.diag
[2025-12-17 03:42:34] -rw-r--r--. 1 boincer umatlas     21198 Dec 17 03:42 stderr.txt
[2025-12-17 03:42:34] HITS file was successfully produced:
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas 145173804 Dec 17 03:41 shared/HITS.pool.root.1
[2025-12-17 03:42:34]  *** Contents of shared directory: ***
[2025-12-17 03:42:34] total 333292
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas 193287900 Dec 17 00:04 ATLAS.root_0
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:04 start_atlas.sh
[2025-12-17 03:42:34] -rw-r--r--. 2 boincer umatlas    592403 Dec 17 00:04 input.tar.gz
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas 145173804 Dec 17 03:41 HITS.pool.root.1
[2025-12-17 03:42:34] -rw-------. 1 boincer umatlas   2211840 Dec 17 03:42 result.tar.gz
03:42:35 (2372531): run_atlas exited; CPU time 35930.634381
03:42:35 (2372531): called boinc_finish(0)

</stderr_txt>
]]>

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