Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:54 (1196146): wrapper (7.7.26015): starting
00:12:54 (1196146): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 00:12:54] Arguments: --nthreads 8
[2025-12-17 00:12:54] Threads: 8
[2025-12-17 00:12:54] Checking for CVMFS
[2025-12-17 00:12:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:12:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:12:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:12:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:12:57] 2.13.2.0 9379 63574 331316 154100 2 250 34308059 39288833 16853 16776704 0 62016617 99.559 76390590 36750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-17 00:12:57] CVMFS is ok
[2025-12-17 00:12:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:12:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:12:57] Further information can be found at the LHC@home message board.
[2025-12-17 00:12:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:12:57] Checking for apptainer binary...
[2025-12-17 00:12:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:12:57] Running /usr/bin/apptainer --version
[2025-12-17 00:12:57] apptainer version 1.4.4-1.el9
[2025-12-17 00:12:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:12:58] c-210-19.aglt2.org
[2025-12-17 00:12:58] apptainer works
[2025-12-17 00:12:58] Set ATHENA_PROC_NUMBER=8
[2025-12-17 00:12:58] Set ATHENA_CORE_NUMBER=8
[2025-12-17 00:12:58] Starting ATLAS job with PandaID=6931014440
[2025-12-17 00:12:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 12:43:35]  *** The last 200 lines of the pilot log: ***
[2025-12-17 12:43:35] 2025-12-17 17:42:44,838 | INFO     | monitor loop #2506: job 0:6931014440 is in state 'finished'
[2025-12-17 12:43:35] 2025-12-17 17:42:44,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 12:43:35] 2025-12-17 17:42:44,842 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8462000000004
[2025-12-17 12:43:35] 2025-12-17 17:42:44,897 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6931014440/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 12:43:35] 2025-12-17 17:42:44,898 | INFO     | extracted standard info from prmon json
[2025-12-17 12:43:35] 2025-12-17 17:42:44,898 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 12:43:35] 2025-12-17 17:42:44,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 12:43:35] 2025-12-17 17:42:44,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 12:43:35] 2025-12-17 17:42:44,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 12:43:35] 2025-12-17 17:42:45,014 | INFO     | fitting pss+swap vs Time
[2025-12-17 12:43:35] 2025-12-17 17:42:45,016 | INFO     | sum of square deviations: 122620128447.20482
[2025-12-17 12:43:35] 2025-12-17 17:42:45,131 | INFO     | sum of deviations: 250186593933.94296
[2025-12-17 12:43:35] 2025-12-17 17:42:45,131 | INFO     | mean x: 1765970928.370572
[2025-12-17 12:43:35] 2025-12-17 17:42:45,131 | INFO     | mean y: 2473664.136239782
[2025-12-17 12:43:35] 2025-12-17 17:42:45,131 | INFO     | intersect: -3600705170.777696
[2025-12-17 12:43:35] 2025-12-17 17:42:45,148 | INFO     | chi2: 3.8626358516810093
[2025-12-17 12:43:35] 2025-12-17 17:42:45,149 | INFO     | sum of square deviations: 120131646699.85448
[2025-12-17 12:43:35] 2025-12-17 17:42:45,286 | INFO     | sum of deviations: 291215634106.8972
[2025-12-17 12:43:35] 2025-12-17 17:42:45,287 | INFO     | mean x: 1765970775.8820302
[2025-12-17 12:43:35] 2025-12-17 17:42:45,287 | INFO     | mean y: 2476163.3127572015
[2025-12-17 12:43:35] 2025-12-17 17:42:45,287 | INFO     | intersect: -4278479883.162195
[2025-12-17 12:43:35] 2025-12-17 17:42:45,288 | INFO     | chi2: 3.1860217103405373
[2025-12-17 12:43:35] 2025-12-17 17:42:45,288 | INFO     | current chi2=3.1860217103405373 (change=17.51690211869212 %)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,288 | INFO     | right removable region: 728
[2025-12-17 12:43:35] 2025-12-17 17:42:45,292 | INFO     | sum of square deviations: 120131032314.13423
[2025-12-17 12:43:35] 2025-12-17 17:42:45,407 | INFO     | sum of deviations: 79104385779.76828
[2025-12-17 12:43:35] 2025-12-17 17:42:45,407 | INFO     | mean x: 1765971080.877915
[2025-12-17 12:43:35] 2025-12-17 17:42:45,407 | INFO     | mean y: 2484133.8737997254
[2025-12-17 12:43:35] 2025-12-17 17:42:45,407 | INFO     | intersect: -1160379906.8878376
[2025-12-17 12:43:35] 2025-12-17 17:42:45,409 | INFO     | chi2: 1.7044566106882189
[2025-12-17 12:43:35] 2025-12-17 17:42:45,409 | INFO     | current chi2=1.7044566106882189 (change=55.873225534671015 %)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,413 | INFO     | sum of square deviations: 117676021302.5462
[2025-12-17 12:43:35] 2025-12-17 17:42:45,468 | INFO     | sum of deviations: 781321424.9530869
[2025-12-17 12:43:35] 2025-12-17 17:42:45,468 | INFO     | mean x: 1765971233.3798342
[2025-12-17 12:43:35] 2025-12-17 17:42:45,468 | INFO     | mean y: 2488992.94198895
[2025-12-17 12:43:35] 2025-12-17 17:42:45,468 | INFO     | intersect: -9236345.365830243
[2025-12-17 12:43:35] 2025-12-17 17:42:45,470 | INFO     | chi2: 1.2545372406680897
[2025-12-17 12:43:35] 2025-12-17 17:42:45,505 | INFO     | current chi2=1.2545372406680897 (change=26.396645546668534 %)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,506 | INFO     | sum of square deviations: 115254509049.87468
[2025-12-17 12:43:35] 2025-12-17 17:42:45,531 | INFO     | sum of deviations: -44077039831.84005
[2025-12-17 12:43:35] 2025-12-17 17:42:45,531 | INFO     | mean x: 1765971385.8873436
[2025-12-17 12:43:35] 2025-12-17 17:42:45,531 | INFO     | mean y: 2491817.6439499306
[2025-12-17 12:43:35] 2025-12-17 17:42:45,532 | INFO     | intersect: 677856206.9361957
[2025-12-17 12:43:35] 2025-12-17 17:42:45,584 | INFO     | chi2: 1.11665361854288
[2025-12-17 12:43:35] 2025-12-17 17:42:45,584 | INFO     | current chi2=1.11665361854288 (change=10.990795462698372 %)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,585 | INFO     | left removable region: 30
[2025-12-17 12:43:35] 2025-12-17 17:42:45,586 | INFO     | sum of square deviations: 105447989825.87537
[2025-12-17 12:43:35] 2025-12-17 17:42:45,648 | INFO     | sum of deviations: -45961778973.27652
[2025-12-17 12:43:35] 2025-12-17 17:42:45,649 | INFO     | mean x: 1765971660.4025788
[2025-12-17 12:43:35] 2025-12-17 17:42:45,649 | INFO     | mean y: 2497371.7091690544
[2025-12-17 12:43:35] 2025-12-17 17:42:45,649 | INFO     | intersect: 772234179.992794
[2025-12-17 12:43:35] 2025-12-17 17:42:45,672 | INFO     | chi2: 0.35336115213156655
[2025-12-17 12:43:35] 2025-12-17 17:42:45,673 | INFO     | current memory leak: -0.44 B/s (using 698 data points, chi2=0.35)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,674 | INFO     | could have reported an average CPU frequency of 2599 MHz (28 samples)
[2025-12-17 12:43:35] 2025-12-17 17:42:45,674 | INFO     | ..............................
[2025-12-17 12:43:35] 2025-12-17 17:42:45,674 | INFO     | . Timing measurements:
[2025-12-17 12:43:35] 2025-12-17 17:42:45,675 | INFO     | . get job = 0 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,675 | INFO     | . initial setup = 5 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,675 | INFO     | . payload setup = 40 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,681 | INFO     | . stage-in = 0 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,681 | INFO     | . payload execution = 44758 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,681 | INFO     | . stage-out = 3 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,681 | INFO     | . log creation = 0 s
[2025-12-17 12:43:35] 2025-12-17 17:42:45,681 | INFO     | ..............................
[2025-12-17 12:43:35] 2025-12-17 17:42:46,282 | INFO     | time since job start (44928s) is within the limit (174528.0s)
[2025-12-17 12:43:35] 2025-12-17 17:42:46,789 | INFO     | 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,789 | INFO     | job summary report
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | --------------------------------------------------
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | PanDA job id: 6931014440
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | task id: 47886831
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | errors: (none)
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | pilot state: finished 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | transexitcode: 0
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | exeerrorcode: 0
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | exeerrordiag: 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,790 | INFO     | exitcode: 0
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | exitmsg: OK
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | cpuconsumptiontime: 57014 s
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | nevents: 400
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | neventsw: 0
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | pid: 1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | pgrp: 1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | corecount: 8
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | event service: False
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | sizes: {0: 2283766, 1: 2283822, 2: 2283850, 3: 2284077, 14: 2284077, 25: 2284105, 29: 2284523, 36: 2284551, 44802: 2328892, 44803: 2328891, 44808: 2337945, 44809: 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | --------------------------------------------------
[2025-12-17 12:43:35] 2025-12-17 17:42:46,791 | INFO     | 
[2025-12-17 12:43:35] 2025-12-17 17:42:46,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 12:43:35] 2025-12-17 17:42:47,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,177 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 12:43:35] 2025-12-17 17:42:47,178 | INFO     | job 6931014440 has completed (purged errors)
[2025-12-17 12:43:35] 2025-12-17 17:42:47,183 | INFO     | overall cleanup function is called
[2025-12-17 12:43:35] 2025-12-17 17:42:48,198 | INFO     | --- collectZombieJob: --- 10, [1209425]
[2025-12-17 12:43:35] 2025-12-17 17:42:48,198 | INFO     | zombie collector waiting for pid 1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:48,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 12:43:35] 2025-12-17 17:42:48,199 | INFO     | collected zombie processes
[2025-12-17 12:43:35] 2025-12-17 17:42:48,199 | INFO     | will attempt to kill all subprocesses of pid=1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:48,497 | INFO     | process IDs to be killed: [1209425] (in reverse order)
[2025-12-17 12:43:35] 2025-12-17 17:42:48,598 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 12:43:35] 2025-12-17 17:42:48,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 12:43:35] 2025-12-17 17:42:48,610 | INFO     | did not find any defunct processes belonging to 1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:48,623 | INFO     | did not find any defunct processes belonging to 1209425
[2025-12-17 12:43:35] 2025-12-17 17:42:48,624 | INFO     | ready for new job
[2025-12-17 12:43:35] 2025-12-17 17:42:48,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 12:43:35] 2025-12-17 17:42:48,629 | INFO     | ***************************************
[2025-12-17 12:43:35] 2025-12-17 17:42:48,629 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 12:43:35] 2025-12-17 17:42:48,629 | INFO     | ***************************************
[2025-12-17 12:43:35] 2025-12-17 17:42:48,629 | INFO     | 
[2025-12-17 12:43:35] 2025-12-17 17:42:48,632 | INFO     | architecture information:
[2025-12-17 12:43:35] 2025-12-17 17:42:48,633 | INFO     | executing command: cat /etc/os-release
[2025-12-17 12:43:35] 2025-12-17 17:42:48,654 | INFO     | cat /etc/os-release:
[2025-12-17 12:43:35] NAME="CentOS Linux"
[2025-12-17 12:43:35] VERSION="7 (Core)"
[2025-12-17 12:43:35] ID="centos"
[2025-12-17 12:43:35] ID_LIKE="rhel fedora"
[2025-12-17 12:43:35] VERSION_ID="7"
[2025-12-17 12:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 12:43:35] ANSI_COLOR="0;31"
[2025-12-17 12:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 12:43:35] HOME_URL="https://www.centos.org/"
[2025-12-17 12:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 12:43:35] 
[2025-12-17 12:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 12:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 12:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 12:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 12:43:35] 
[2025-12-17 12:43:35] 2025-12-17 17:42:48,654 | INFO     | ***************************************
[2025-12-17 12:43:35] 2025-12-17 17:42:49,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 12:43:35] 2025-12-17 17:42:49,408 | INFO     | sufficient remaining disk space (53343158272 B)
[2025-12-17 12:43:35] 2025-12-17 17:42:49,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 12:43:35] 2025-12-17 17:42:49,409 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 12:43:35] 2025-12-17 17:42:49,409 | INFO     | update_server=False
[2025-12-17 12:43:35] 2025-12-17 17:42:49,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 12:43:35] 2025-12-17 17:42:49,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:43:35] 2025-12-17 17:42:49,410 | INFO     | aborting loop
[2025-12-17 12:43:35] 2025-12-17 17:42:49,604 | INFO     | all job control threads have been joined
[2025-12-17 12:43:35] 2025-12-17 17:42:50,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 12:43:35] 2025-12-17 17:42:50,323 | INFO     | all data control threads have been joined
[2025-12-17 12:43:35] 2025-12-17 17:42:50,415 | INFO     | [job] retrieve thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:50,416 | INFO     | [job] job monitor thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:50,447 | INFO     | all payload control threads have been joined
[2025-12-17 12:43:35] 2025-12-17 17:42:50,610 | INFO     | [job] control thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:50,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 12:43:35] 2025-12-17 17:42:51,057 | INFO     | [data] copytool_in thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,104 | INFO     | [job] validate thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,241 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,250 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,329 | INFO     | [data] control thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,453 | INFO     | [payload] control thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 12:43:35] 2025-12-17 17:42:51,663 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,672 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,925 | INFO     | [payload] failed_post thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:51,957 | INFO     | [payload] validate_post thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:52,164 | INFO     | [data] copytool_out thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:52,647 | INFO     | [job] queue monitor thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:42:54,734 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 12:43:35] 2025-12-17 17:43:19,991 | INFO     | PID=1200041 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 12:43:35] 2025-12-17 17:43:19,992 | INFO     | .. there are 13 such processes running
[2025-12-17 12:43:35] 2025-12-17 17:43:19,993 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 12:43:35] 2025-12-17 17:43:19,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 12:43:35] 2025-12-17 17:43:19,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 12:43:35] 2025-12-17 17:43:27,505 | INFO     | [monitor] cgroup control has ended
[2025-12-17 12:43:35] 2025-12-17 17:43:28,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433336821568)>', '<ExcThread(monitor, started 140432612783872)>']
[2025-12-17 12:43:35] 2025-12-17 17:43:28,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 12:43:35] 2025-12-17 17:43:28,041 | INFO     | [monitor] control thread has ended
[2025-12-17 12:43:35] 2025-12-17 17:43:33,056 | INFO     | all workflow threads have been joined
[2025-12-17 12:43:35] 2025-12-17 17:43:33,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 12:43:35] 2025-12-17 17:43:33,057 | INFO     | traces error code: 0
[2025-12-17 12:43:35] 2025-12-17 17:43:33,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 12:43:35] 2025-12-17 17:43:34,170 [wrapper] ==== pilot stdout END ====
[2025-12-17 12:43:35] 2025-12-17 17:43:34,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 12:43:35] 2025-12-17 17:43:34,455 [wrapper] pilotpid: 1200041
[2025-12-17 12:43:35] 2025-12-17 17:43:34,513 [wrapper] Pilot exit status: 0
[2025-12-17 12:43:35] 2025-12-17 17:43:34,812 [wrapper] pandaids: 6931014440
[2025-12-17 12:43:35] 2025-12-17 17:43:35,322 [wrapper] cleanup supervisor_pilot 2767476 1200042
[2025-12-17 12:43:35] 2025-12-17 17:43:35,327 [wrapper] Test setup, not cleaning
[2025-12-17 12:43:35] 2025-12-17 17:43:35,332 [wrapper] apfmon messages muted
[2025-12-17 12:43:35] 2025-12-17 17:43:35,336 [wrapper] ==== wrapper stdout END ====
[2025-12-17 12:43:35] 2025-12-17 17:43:35,340 [wrapper] ==== wrapper stderr END ====
[2025-12-17 12:43:35]  *** Error codes and diagnostics ***
[2025-12-17 12:43:35]     "exeErrorCode": 0,
[2025-12-17 12:43:35]     "exeErrorDiag": "",
[2025-12-17 12:43:35]     "pilotErrorCode": 0,
[2025-12-17 12:43:35]     "pilotErrorDiag": "",
[2025-12-17 12:43:35]  *** Listing of results directory ***
[2025-12-17 12:43:35] total 355564
[2025-12-17 12:43:35] -rwx------. 1 boincer umatlas     36322 Dec 16 07:10 runpilot2-wrapper.sh
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 07:11 pilot3.tar.gz
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 07:12 queuedata.json
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 12:43:35] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:12 run_atlas
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:12 job.xml
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas 192409316 Dec 17 00:12 EVNT.47886829._000495.pool.root.1
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:12 start_atlas.sh
[2025-12-17 12:43:35] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:12 shared
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas    592419 Dec 17 00:12 input.tar.gz
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:12 boinc_lockfile
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 00:12 pandaJob.out
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas        57 Dec 17 00:12 setup.sh.local
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas    987409 Dec 17 00:13 agis_schedconf.cvmfs.json
[2025-12-17 12:43:35] drwx------. 5 boincer umatlas      4096 Dec 17 00:13 pilot3
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas      6708 Dec 17 12:37 init_data.xml
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas 155480530 Dec 17 12:40 HITS.47886831._013987.pool.root.1
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas       530 Dec 17 12:40 boinc_task_state.xml
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas      1046 Dec 17 12:41 memory_monitor_summary.json
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas   1516240 Dec 17 12:41 agis_ddmendpoints.agis.ALL.json
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas    823328 Dec 17 12:41 log.47886831._013987.job.log.tgz.1
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas      7826 Dec 17 12:42 heartbeat.json
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas        95 Dec 17 12:43 pilot_heartbeat.json
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas      4824 Dec 17 12:43 pilotlog.txt
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 12:43 boinc_mmap_file
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas        27 Dec 17 12:43 wrapper_checkpoint.txt
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas   5319137 Dec 17 12:43 log.47886831._013987.job.log.1
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas       357 Dec 17 12:43 output.list
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas       620 Dec 17 12:43 runtime_log
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas   6164480 Dec 17 12:43 result.tar.gz
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas      9343 Dec 17 12:43 runtime_log.err
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas       658 Dec 17 12:43 7p1NDmf3ip8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhdVKDmmLFUZn.diag
[2025-12-17 12:43:35] -rw-r--r--. 1 boincer umatlas     21268 Dec 17 12:43 stderr.txt
[2025-12-17 12:43:35] HITS file was successfully produced:
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas 155480530 Dec 17 12:40 shared/HITS.pool.root.1
[2025-12-17 12:43:35]  *** Contents of shared directory: ***
[2025-12-17 12:43:35] total 346364
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas 192409316 Dec 17 00:12 ATLAS.root_0
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:12 start_atlas.sh
[2025-12-17 12:43:35] -rw-r--r--. 2 boincer umatlas    592419 Dec 17 00:12 input.tar.gz
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas 155480530 Dec 17 12:40 HITS.pool.root.1
[2025-12-17 12:43:35] -rw-------. 1 boincer umatlas   6164480 Dec 17 12:43 result.tar.gz
12:43:37 (1196146): run_atlas exited; CPU time 58202.092170
12:43:37 (1196146): called boinc_finish(0)

</stderr_txt>
]]>

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