Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:11 (2693784): wrapper (7.7.26015): starting
00:04:11 (2693784): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:04:11] Arguments: --nthreads 12
[2025-12-17 00:04:11] Threads: 12
[2025-12-17 00:04:11] Checking for CVMFS
[2025-12-17 00:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:04:12] 2.13.3.0 11235 58150 270196 154099 1 1162 27801441 32935936 31381 16776704 0 541827649 99.566 582848570 18053 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:04:12] CVMFS is ok
[2025-12-17 00:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:04:12] Further information can be found at the LHC@home message board.
[2025-12-17 00:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:04:12] Checking for apptainer binary...
[2025-12-17 00:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:04:12] Running /usr/bin/apptainer --version
[2025-12-17 00:04:12] apptainer version 1.4.5-2.el9
[2025-12-17 00:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:04:12] c7-2-37.aglt2.org
[2025-12-17 00:04:12] apptainer works
[2025-12-17 00:04:12] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:04:12] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:04:12] Starting ATLAS job with PandaID=6931598071
[2025-12-17 00:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:20:26]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:20:26] 2025-12-17 10:19:36,834 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 05:20:26] 2025-12-17 10:19:36,857 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3347.076000000001
[2025-12-17 05:20:26] 2025-12-17 10:19:36,872 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6931598071/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,873 | INFO     | extracted standard info from prmon json
[2025-12-17 05:20:26] 2025-12-17 10:19:36,876 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:20:26] 2025-12-17 10:19:36,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:20:26] 2025-12-17 10:19:36,876 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:20:26] 2025-12-17 10:19:36,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:20:26] 2025-12-17 10:19:36,881 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:20:26] 2025-12-17 10:19:36,882 | INFO     | sum of square deviations: 9148695208.841475
[2025-12-17 05:20:26] 2025-12-17 10:19:36,884 | INFO     | sum of deviations: 77440639064.74118
[2025-12-17 05:20:26] 2025-12-17 10:19:36,884 | INFO     | mean x: 1765957351.355987
[2025-12-17 05:20:26] 2025-12-17 10:19:36,885 | INFO     | mean y: 2613994.275080906
[2025-12-17 05:20:26] 2025-12-17 10:19:36,885 | INFO     | intersect: -14945623183.625528
[2025-12-17 05:20:26] 2025-12-17 10:19:36,885 | INFO     | chi2: 2.9082747786131993
[2025-12-17 05:20:26] 2025-12-17 10:19:36,885 | INFO     | sum of square deviations: 8711715424.338823
[2025-12-17 05:20:26] 2025-12-17 10:19:36,887 | INFO     | sum of deviations: 98315011396.88156
[2025-12-17 05:20:26] 2025-12-17 10:19:36,887 | INFO     | mean x: 1765957198.8519738
[2025-12-17 05:20:26] 2025-12-17 10:19:36,888 | INFO     | mean y: 2621177.197368421
[2025-12-17 05:20:26] 2025-12-17 10:19:36,888 | INFO     | intersect: -19926875331.202843
[2025-12-17 05:20:26] 2025-12-17 10:19:36,888 | INFO     | chi2: 2.086533137589202
[2025-12-17 05:20:26] 2025-12-17 10:19:36,888 | INFO     | current chi2=2.086533137589202 (change=28.255295787966837 %)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,889 | INFO     | sum of square deviations: 8288874829.826138
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | sum of deviations: 96309195668.26085
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | mean x: 1765957046.347826
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | mean y: 2620453.5551839466
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | intersect: -20516196178.40308
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | chi2: 2.0865758431065355
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | current chi2=2.0865758431065355 (change=-0.002046721260458074 %)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,891 | INFO     | right removable region: 298
[2025-12-17 05:20:26] 2025-12-17 10:19:36,892 | INFO     | sum of square deviations: 8711704628.19742
[2025-12-17 05:20:26] 2025-12-17 10:19:36,894 | INFO     | sum of deviations: 16123333434.756607
[2025-12-17 05:20:26] 2025-12-17 10:19:36,894 | INFO     | mean x: 1765957503.8618422
[2025-12-17 05:20:26] 2025-12-17 10:19:36,894 | INFO     | mean y: 2635279.4703947366
[2025-12-17 05:20:26] 2025-12-17 10:19:36,894 | INFO     | intersect: -3265740185.6728106
[2025-12-17 05:20:26] 2025-12-17 10:19:36,895 | INFO     | chi2: 1.1992216938267921
[2025-12-17 05:20:26] 2025-12-17 10:19:36,895 | INFO     | current chi2=1.1992216938267921 (change=58.76518605994181 %)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,895 | INFO     | sum of square deviations: 8288853847.531802
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | sum of deviations: -7593378923.40803
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | mean x: 1765957656.367893
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | mean y: 2643833.7491638795
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | intersect: 1620429102.2743185
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | chi2: 1.0149221026783304
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | current chi2=1.0149221026783304 (change=15.368266943232998 %)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,898 | INFO     | left removable region: 20
[2025-12-17 05:20:26] 2025-12-17 10:19:36,899 | INFO     | sum of square deviations: 6662097333.338144
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | sum of deviations: -7317708563.611502
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | mean x: 1765957625.8705037
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | mean y: 2659795.010791367
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | intersect: 1942403781.809086
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | chi2: 0.014893036673666973
[2025-12-17 05:20:26] 2025-12-17 10:19:36,901 | INFO     | current memory leak: -1.10 B/s (using 278 data points, chi2=0.01)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | could have reported an average CPU frequency of 3237 MHz (14 samples)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | ..............................
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | . Timing measurements:
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | . get job = 0 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | . initial setup = 3 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | . payload setup = 15 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,902 | INFO     | . stage-in = 0 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,903 | INFO     | . payload execution = 18818 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,903 | INFO     | . stage-out = 3 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,903 | INFO     | . log creation = 0 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,903 | INFO     | ..............................
[2025-12-17 05:20:26] 2025-12-17 10:19:36,957 | INFO     | 
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | job summary report
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | --------------------------------------------------
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | PanDA job id: 6931598071
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | task id: 47886831
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | errors: (none)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | pilot state: finished 
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | transexitcode: 0
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | exeerrorcode: 0
[2025-12-17 05:20:26] 2025-12-17 10:19:36,958 | INFO     | exeerrordiag: 
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | exitcode: 0
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | exitmsg: OK
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | cpuconsumptiontime: 34297 s
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | nevents: 400
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | neventsw: 0
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | pid: 2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | pgrp: 2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | corecount: 12
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | event service: False
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | sizes: {0: 2283822, 1: 2284021, 2: 2284021, 12: 2284049, 16: 2284339, 23: 2284367, 18837: 2317160, 18841: 2326158, 18842: 2326214, 18849: 2326408}
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | --------------------------------------------------
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | 
[2025-12-17 05:20:26] 2025-12-17 10:19:36,959 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-12-17 05:20:26] 2025-12-17 10:19:36,979 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | job 6931598071 has completed (purged errors)
[2025-12-17 05:20:26] 2025-12-17 10:19:36,981 | INFO     | overall cleanup function is called
[2025-12-17 05:20:26] 2025-12-17 10:19:37,990 | INFO     | --- collectZombieJob: --- 10, [2752789]
[2025-12-17 05:20:26] 2025-12-17 10:19:37,991 | INFO     | zombie collector waiting for pid 2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:37,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:20:26] 2025-12-17 10:19:37,991 | INFO     | collected zombie processes
[2025-12-17 05:20:26] 2025-12-17 10:19:37,991 | INFO     | will attempt to kill all subprocesses of pid=2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:38,580 | INFO     | process IDs to be killed: [2752789] (in reverse order)
[2025-12-17 05:20:26] 2025-12-17 10:19:38,759 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:20:26] 2025-12-17 10:19:38,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:20:26] 2025-12-17 10:19:38,782 | INFO     | did not find any defunct processes belonging to 2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:38,807 | INFO     | did not find any defunct processes belonging to 2752789
[2025-12-17 05:20:26] 2025-12-17 10:19:38,807 | INFO     | ready for new job
[2025-12-17 05:20:26] 2025-12-17 10:19:38,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:20:26] 2025-12-17 10:19:38,810 | INFO     | ***************************************
[2025-12-17 05:20:26] 2025-12-17 10:19:38,810 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:20:26] 2025-12-17 10:19:38,810 | INFO     | ***************************************
[2025-12-17 05:20:26] 2025-12-17 10:19:38,810 | INFO     | 
[2025-12-17 05:20:26] 2025-12-17 10:19:38,827 | INFO     | architecture information:
[2025-12-17 05:20:26] 2025-12-17 10:19:38,848 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:20:26] 2025-12-17 10:19:38,876 | INFO     | cat /etc/os-release:
[2025-12-17 05:20:26] NAME="CentOS Linux"
[2025-12-17 05:20:26] VERSION="7 (Core)"
[2025-12-17 05:20:26] ID="centos"
[2025-12-17 05:20:26] ID_LIKE="rhel fedora"
[2025-12-17 05:20:26] VERSION_ID="7"
[2025-12-17 05:20:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:20:26] ANSI_COLOR="0;31"
[2025-12-17 05:20:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:20:26] HOME_URL="https://www.centos.org/"
[2025-12-17 05:20:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:20:26] 
[2025-12-17 05:20:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:20:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:20:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:20:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:20:26] 
[2025-12-17 05:20:26] 2025-12-17 10:19:38,876 | INFO     | ***************************************
[2025-12-17 05:20:26] 2025-12-17 10:19:39,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-12-17 05:20:26] 2025-12-17 10:19:39,398 | INFO     | sufficient remaining disk space (73847013376 B)
[2025-12-17 05:20:26] 2025-12-17 10:19:39,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:20:26] 2025-12-17 10:19:39,398 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:20:26] 2025-12-17 10:19:39,398 | INFO     | update_server=False
[2025-12-17 05:20:26] 2025-12-17 10:19:39,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:20:26] 2025-12-17 10:19:39,498 | INFO     | all data control threads have been joined
[2025-12-17 05:20:26] 2025-12-17 10:19:39,805 | INFO     | all job control threads have been joined
[2025-12-17 05:20:26] 2025-12-17 10:19:39,850 | INFO     | all payload control threads have been joined
[2025-12-17 05:20:26] 2025-12-17 10:19:39,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:20:26] 2025-12-17 10:19:39,870 | INFO     | aborting loop
[2025-12-17 05:20:26] 2025-12-17 10:19:39,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:20:26] 2025-12-17 10:19:40,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:20:26] 2025-12-17 10:19:40,405 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,495 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,504 | INFO     | [data] control thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,592 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,729 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,810 | INFO     | [job] control thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,856 | INFO     | [payload] control thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:40,876 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:41,026 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:41,378 | INFO     | [job] validate thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:41,379 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:41,432 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:41,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:20:26] 2025-12-17 10:19:42,004 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:42,978 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:44,222 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:19:44,280 [wrapper] supervise_pilot (15 min periods counter: 22)
[2025-12-17 05:20:26] 2025-12-17 10:19:49,514 | INFO     | job.realtimelogging is not enabled
[2025-12-17 05:20:26] 2025-12-17 10:19:50,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:20:26] 2025-12-17 10:20:10,407 | INFO     | PID=2708813 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:20:26] 2025-12-17 10:20:10,407 | INFO     | .. there are 48 such processes running
[2025-12-17 05:20:26] 2025-12-17 10:20:10,408 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:20:26] 2025-12-17 10:20:10,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:20:26] 2025-12-17 10:20:10,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:20:26] 2025-12-17 10:20:20,435 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:20:26] 2025-12-17 10:20:20,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449394423616)>', '<ExcThread(monitor, started 140448895059712)>']
[2025-12-17 05:20:26] 2025-12-17 10:20:21,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:20:26] 2025-12-17 10:20:21,473 | INFO     | [monitor] control thread has ended
[2025-12-17 05:20:26] 2025-12-17 10:20:25,831 | INFO     | all workflow threads have been joined
[2025-12-17 05:20:26] 2025-12-17 10:20:25,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:20:26] 2025-12-17 10:20:25,860 | INFO     | traces error code: 0
[2025-12-17 05:20:26] 2025-12-17 10:20:25,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:20:26] 2025-12-17 10:20:26,048 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:20:26] 2025-12-17 10:20:26,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:20:26] 2025-12-17 10:20:26,053 [wrapper] pilotpid: 2708813
[2025-12-17 05:20:26] 2025-12-17 10:20:26,055 [wrapper] Pilot exit status: 0
[2025-12-17 05:20:26] 2025-12-17 10:20:26,073 [wrapper] pandaids: 6931598071
[2025-12-17 05:20:26] 2025-12-17 10:20:26,197 [wrapper] cleanup supervisor_pilot 1895736 2708814
[2025-12-17 05:20:26] 2025-12-17 10:20:26,203 [wrapper] Test setup, not cleaning
[2025-12-17 05:20:26] 2025-12-17 10:20:26,208 [wrapper] apfmon messages muted
[2025-12-17 05:20:26] 2025-12-17 10:20:26,211 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:20:26] 2025-12-17 10:20:26,213 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:20:26]  *** Error codes and diagnostics ***
[2025-12-17 05:20:26]     "exeErrorCode": 0,
[2025-12-17 05:20:26]     "exeErrorDiag": "",
[2025-12-17 05:20:26]     "pilotErrorCode": 0,
[2025-12-17 05:20:26]     "pilotErrorDiag": "",
[2025-12-17 05:20:26]  *** Listing of results directory ***
[2025-12-17 05:20:26] total 340680
[2025-12-17 05:20:26] -rwx------. 1 boincer umatlas     36322 Dec 16 12:39 runpilot2-wrapper.sh
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:40 queuedata.json
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:41 pilot3.tar.gz
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:20:26] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:04 run_atlas
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:04 job.xml
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas 193240940 Dec 17 00:04 EVNT.47886829._000576.pool.root.1
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:04 start_atlas.sh
[2025-12-17 05:20:26] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:04 shared
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 00:04 input.tar.gz
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:04 boinc_lockfile
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas      2539 Dec 17 00:04 pandaJob.out
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas        57 Dec 17 00:04 setup.sh.local
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas    987409 Dec 17 00:04 agis_schedconf.cvmfs.json
[2025-12-17 05:20:26] drwx------. 5 boincer umatlas      4096 Dec 17 00:04 pilot3
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas      6945 Dec 17 05:10 init_data.xml
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas 145854840 Dec 17 05:18 HITS.47886831._014618.pool.root.1
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas       530 Dec 17 05:19 boinc_task_state.xml
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas      1046 Dec 17 05:19 memory_monitor_summary.json
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas   1516240 Dec 17 05:19 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas    564061 Dec 17 05:19 log.47886831._014618.job.log.tgz.1
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas      7784 Dec 17 05:19 heartbeat.json
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas        95 Dec 17 05:20 pilot_heartbeat.json
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas        28 Dec 17 05:20 wrapper_checkpoint.txt
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas      4896 Dec 17 05:20 pilotlog.txt
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 05:20 boinc_mmap_file
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas   2359554 Dec 17 05:20 log.47886831._014618.job.log.1
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas       357 Dec 17 05:20 output.list
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas       620 Dec 17 05:20 runtime_log
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas   2938880 Dec 17 05:20 result.tar.gz
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas      9340 Dec 17 05:20 runtime_log.err
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas       658 Dec 17 05:20 pETKDmwBop8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnWaKDm7j3Dsn.diag
[2025-12-17 05:20:26] -rw-r--r--. 1 boincer umatlas     21172 Dec 17 05:20 stderr.txt
[2025-12-17 05:20:26] HITS file was successfully produced:
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas 145854840 Dec 17 05:18 shared/HITS.pool.root.1
[2025-12-17 05:20:26]  *** Contents of shared directory: ***
[2025-12-17 05:20:26] total 334624
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas 193240940 Dec 17 00:04 ATLAS.root_0
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:04 start_atlas.sh
[2025-12-17 05:20:26] -rw-r--r--. 2 boincer umatlas    592411 Dec 17 00:04 input.tar.gz
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas 145854840 Dec 17 05:18 HITS.pool.root.1
[2025-12-17 05:20:26] -rw-------. 1 boincer umatlas   2938880 Dec 17 05:20 result.tar.gz
05:20:27 (2693784): run_atlas exited; CPU time 35212.996081
05:20:27 (2693784): called boinc_finish(0)

</stderr_txt>
]]>

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