Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:01 (1623326): wrapper (7.7.26015): starting
00:03:01 (1623326): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:03:01] Arguments: --nthreads 12
[2025-12-17 00:03:01] Threads: 12
[2025-12-17 00:03:01] Checking for CVMFS
[2025-12-17 00:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:03:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:03:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:03:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:03:03] 2.13.3.0 5308 38230 368320 154099 3 979 17194495 32935936 17582 16776704 0 106110619 99.339 208311421 40605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:03:03] CVMFS is ok
[2025-12-17 00:03:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:03:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:03:03] Further information can be found at the LHC@home message board.
[2025-12-17 00:03:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:03:03] Checking for apptainer binary...
[2025-12-17 00:03:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:03:03] Running /usr/bin/apptainer --version
[2025-12-17 00:03:04] apptainer version 1.4.5-2.el9
[2025-12-17 00:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:03:05] c6-1-24-1.aglt2.org
[2025-12-17 00:03:05] apptainer works
[2025-12-17 00:03:05] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:03:05] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:03:05] Starting ATLAS job with PandaID=6931484952
[2025-12-17 00:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:56:52]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:56:52] 2025-12-17 11:56:10,144 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2772.101696428571
[2025-12-17 06:56:52] 2025-12-17 11:56:10,259 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6931484952/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,260 | INFO     | extracted standard info from prmon json
[2025-12-17 06:56:52] 2025-12-17 11:56:10,260 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:56:52] 2025-12-17 11:56:10,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:56:52] 2025-12-17 11:56:10,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:56:52] 2025-12-17 11:56:10,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:56:52] 2025-12-17 11:56:10,311 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:56:52] 2025-12-17 11:56:10,325 | INFO     | sum of square deviations: 20294956723.190914
[2025-12-17 06:56:52] 2025-12-17 11:56:10,329 | INFO     | sum of deviations: 167484700088.77896
[2025-12-17 06:56:52] 2025-12-17 11:56:10,334 | INFO     | mean x: 1765960246.9330025
[2025-12-17 06:56:52] 2025-12-17 11:56:10,334 | INFO     | mean y: 2628368.8436724567
[2025-12-17 06:56:52] 2025-12-17 11:56:10,334 | INFO     | intersect: -14571008143.931149
[2025-12-17 06:56:52] 2025-12-17 11:56:10,335 | INFO     | chi2: 6.560560537324096
[2025-12-17 06:56:52] 2025-12-17 11:56:10,335 | INFO     | sum of square deviations: 19549001596.28393
[2025-12-17 06:56:52] 2025-12-17 11:56:10,355 | INFO     | sum of deviations: 251531388064.1636
[2025-12-17 06:56:52] 2025-12-17 11:56:10,355 | INFO     | mean x: 1765960094.4447236
[2025-12-17 06:56:52] 2025-12-17 11:56:10,355 | INFO     | mean y: 2645463.530150754
[2025-12-17 06:56:52] 2025-12-17 11:56:10,355 | INFO     | intersect: -22719455797.438576
[2025-12-17 06:56:52] 2025-12-17 11:56:10,356 | INFO     | chi2: 4.209610171527836
[2025-12-17 06:56:52] 2025-12-17 11:56:10,356 | INFO     | current chi2=4.209610171527836 (change=35.83459602912466 %)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,356 | INFO     | sum of square deviations: 18821485490.982216
[2025-12-17 06:56:52] 2025-12-17 11:56:10,365 | INFO     | sum of deviations: 247602854641.45856
[2025-12-17 06:56:52] 2025-12-17 11:56:10,366 | INFO     | mean x: 1765959941.9491093
[2025-12-17 06:56:52] 2025-12-17 11:56:10,366 | INFO     | mean y: 2644640.0229007634
[2025-12-17 06:56:52] 2025-12-17 11:56:10,366 | INFO     | intersect: -23229141342.999702
[2025-12-17 06:56:52] 2025-12-17 11:56:10,366 | INFO     | chi2: 4.209824910795287
[2025-12-17 06:56:52] 2025-12-17 11:56:10,366 | INFO     | current chi2=4.209824910795287 (change=-0.0051011675357453875 %)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,367 | INFO     | right removable region: 392
[2025-12-17 06:56:52] 2025-12-17 11:56:10,386 | INFO     | sum of square deviations: 19548821282.052795
[2025-12-17 06:56:52] 2025-12-17 11:56:10,390 | INFO     | sum of deviations: 40561078566.97986
[2025-12-17 06:56:52] 2025-12-17 11:56:10,390 | INFO     | mean x: 1765960399.4396985
[2025-12-17 06:56:52] 2025-12-17 11:56:10,390 | INFO     | mean y: 2654282.165829146
[2025-12-17 06:56:52] 2025-12-17 11:56:10,390 | INFO     | intersect: -3661467327.744712
[2025-12-17 06:56:52] 2025-12-17 11:56:10,391 | INFO     | chi2: 3.3274764311799148
[2025-12-17 06:56:52] 2025-12-17 11:56:10,391 | INFO     | current chi2=3.3274764311799148 (change=49.28060777353764 %)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,391 | INFO     | sum of square deviations: 18821246617.65405
[2025-12-17 06:56:52] 2025-12-17 11:56:10,421 | INFO     | sum of deviations: -16076079045.6819
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | mean x: 1765960551.9414759
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | mean y: 2666140.796437659
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | intersect: 1511053018.7377782
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | chi2: 2.7126375301353756
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | current chi2=2.7126375301353756 (change=18.47763353883528 %)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,422 | INFO     | left removable region: 20
[2025-12-17 06:56:52] 2025-12-17 11:56:10,429 | INFO     | sum of square deviations: 15962451836.782328
[2025-12-17 06:56:52] 2025-12-17 11:56:10,437 | INFO     | sum of deviations: 18562722130.895153
[2025-12-17 06:56:52] 2025-12-17 11:56:10,437 | INFO     | mean x: 1765960521.4758065
[2025-12-17 06:56:52] 2025-12-17 11:56:10,437 | INFO     | mean y: 2694708.9327956988
[2025-12-17 06:56:52] 2025-12-17 11:56:10,438 | INFO     | intersect: -2050939331.092851
[2025-12-17 06:56:52] 2025-12-17 11:56:10,438 | INFO     | chi2: 0.01091597809187354
[2025-12-17 06:56:52] 2025-12-17 11:56:10,438 | INFO     | current memory leak: 1.16 B/s (using 372 data points, chi2=0.01)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | could have reported an average CPU frequency of 2857 MHz (17 samples)
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | ..............................
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . Timing measurements:
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . get job = 0 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . initial setup = 5 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . payload setup = 44 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . stage-in = 0 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . payload execution = 24575 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,439 | INFO     | . stage-out = 4 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,440 | INFO     | . log creation = 0 s
[2025-12-17 06:56:52] 2025-12-17 11:56:10,440 | INFO     | ..............................
[2025-12-17 06:56:52] 2025-12-17 11:56:10,696 | INFO     | time since job start (24731s) is within the limit (174528.0s)
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | 
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | job summary report
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | --------------------------------------------------
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | PanDA job id: 6931484952
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | task id: 47905857
[2025-12-17 06:56:52] 2025-12-17 11:56:11,050 | INFO     | errors: (none)
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | pilot state: finished 
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | transexitcode: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | exeerrorcode: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | exeerrordiag: 
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | exitcode: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | exitmsg: OK
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | cpuconsumptiontime: 60116 s
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | nevents: 400
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | neventsw: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | pid: 1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | pgrp: 1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | corecount: 12
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | event service: False
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | sizes: {0: 2283739, 1: 2283739, 2: 2283938, 3: 2283966, 4: 2283994, 14: 2284022, 24: 2284440, 26: 2284468, 24624: 2319552, 24629: 2328550, 24630: 2328606, 24670: 2
[2025-12-17 06:56:52] 2025-12-17 11:56:11,051 | INFO     | --------------------------------------------------
[2025-12-17 06:56:52] 2025-12-17 11:56:11,052 | INFO     | 
[2025-12-17 06:56:52] 2025-12-17 11:56:11,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 06:56:52] 2025-12-17 11:56:11,171 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | job 6931484952 has completed (purged errors)
[2025-12-17 06:56:52] 2025-12-17 11:56:11,173 | INFO     | overall cleanup function is called
[2025-12-17 06:56:52] 2025-12-17 11:56:12,251 | INFO     | --- collectZombieJob: --- 10, [1648444]
[2025-12-17 06:56:52] 2025-12-17 11:56:12,251 | INFO     | zombie collector waiting for pid 1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:12,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:56:52] 2025-12-17 11:56:12,251 | INFO     | collected zombie processes
[2025-12-17 06:56:52] 2025-12-17 11:56:12,251 | INFO     | will attempt to kill all subprocesses of pid=1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:12,790 | INFO     | PID=1630558 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:56:52] 2025-12-17 11:56:12,790 | INFO     | .. there are 16 such processes running
[2025-12-17 06:56:52] 2025-12-17 11:56:13,295 | INFO     | process IDs to be killed: [1648444] (in reverse order)
[2025-12-17 06:56:52] 2025-12-17 11:56:13,521 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:56:52] 2025-12-17 11:56:13,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:56:52] 2025-12-17 11:56:13,627 | INFO     | did not find any defunct processes belonging to 1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:13,654 | INFO     | did not find any defunct processes belonging to 1648444
[2025-12-17 06:56:52] 2025-12-17 11:56:13,655 | INFO     | ready for new job
[2025-12-17 06:56:52] 2025-12-17 11:56:13,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:56:52] 2025-12-17 11:56:13,661 | INFO     | ***************************************
[2025-12-17 06:56:52] 2025-12-17 11:56:13,662 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:56:52] 2025-12-17 11:56:13,662 | INFO     | ***************************************
[2025-12-17 06:56:52] 2025-12-17 11:56:13,662 | INFO     | 
[2025-12-17 06:56:52] 2025-12-17 11:56:13,718 | INFO     | architecture information:
[2025-12-17 06:56:52] 2025-12-17 11:56:13,720 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:56:52] 2025-12-17 11:56:13,743 | INFO     | cat /etc/os-release:
[2025-12-17 06:56:52] NAME="CentOS Linux"
[2025-12-17 06:56:52] VERSION="7 (Core)"
[2025-12-17 06:56:52] ID="centos"
[2025-12-17 06:56:52] ID_LIKE="rhel fedora"
[2025-12-17 06:56:52] VERSION_ID="7"
[2025-12-17 06:56:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:56:52] ANSI_COLOR="0;31"
[2025-12-17 06:56:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:56:52] HOME_URL="https://www.centos.org/"
[2025-12-17 06:56:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:56:52] 
[2025-12-17 06:56:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:56:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:56:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:56:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:56:52] 
[2025-12-17 06:56:52] 2025-12-17 11:56:13,744 | INFO     | ***************************************
[2025-12-17 06:56:52] 2025-12-17 11:56:14,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 06:56:52] 2025-12-17 11:56:14,383 | INFO     | sufficient remaining disk space (75096915968 B)
[2025-12-17 06:56:52] 2025-12-17 11:56:14,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:56:52] 2025-12-17 11:56:14,384 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:56:52] 2025-12-17 11:56:14,384 | INFO     | update_server=False
[2025-12-17 06:56:52] 2025-12-17 11:56:14,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:56:52] 2025-12-17 11:56:14,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:56:52] 2025-12-17 11:56:14,385 | INFO     | aborting loop
[2025-12-17 06:56:52] 2025-12-17 11:56:14,433 | INFO     | all data control threads have been joined
[2025-12-17 06:56:52] 2025-12-17 11:56:14,478 | INFO     | all payload control threads have been joined
[2025-12-17 06:56:52] 2025-12-17 11:56:15,000 | INFO     | all job control threads have been joined
[2025-12-17 06:56:52] 2025-12-17 11:56:15,390 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,391 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,439 | INFO     | [data] control thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,484 | INFO     | [payload] control thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,507 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:56:52] 2025-12-17 11:56:15,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:56:52] 2025-12-17 11:56:15,875 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:15,972 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,006 | INFO     | [job] control thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,141 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,154 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,430 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,480 | INFO     | [job] validate thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:16,690 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:17,753 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:17,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:56:52] 2025-12-17 11:56:21,880 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:56:52] 2025-12-17 11:56:45,820 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:56:52] 2025-12-17 11:56:46,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719949096768)>', '<ExcThread(monitor, started 140719587038976)>']
[2025-12-17 06:56:52] 2025-12-17 11:56:49,415 | INFO     | PID=1630558 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:56:52] 2025-12-17 11:56:49,415 | INFO     | .. there are 17 such processes running
[2025-12-17 06:56:52] 2025-12-17 11:56:49,416 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:56:52] 2025-12-17 11:56:49,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:56:52] 2025-12-17 11:56:49,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:56:52] 2025-12-17 11:56:49,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:56:52] 2025-12-17 11:56:49,453 | INFO     | [monitor] control thread has ended
[2025-12-17 06:56:52] 2025-12-17 11:56:51,306 | INFO     | all workflow threads have been joined
[2025-12-17 06:56:52] 2025-12-17 11:56:51,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:56:52] 2025-12-17 11:56:51,307 | INFO     | traces error code: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:51,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:56:52] 2025-12-17 11:56:51,593 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:56:52] 2025-12-17 11:56:51,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:56:52] 2025-12-17 11:56:51,603 [wrapper] pilotpid: 1630558
[2025-12-17 06:56:52] 2025-12-17 11:56:51,606 [wrapper] Pilot exit status: 0
[2025-12-17 06:56:52] 2025-12-17 11:56:51,658 [wrapper] pandaids: 6931484952
[2025-12-17 06:56:52] 2025-12-17 11:56:51,974 [wrapper] cleanup supervisor_pilot 2659509 1630559
[2025-12-17 06:56:52] 2025-12-17 11:56:51,978 [wrapper] Test setup, not cleaning
[2025-12-17 06:56:52] 2025-12-17 11:56:51,981 [wrapper] apfmon messages muted
[2025-12-17 06:56:52] 2025-12-17 11:56:51,983 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:56:52] 2025-12-17 11:56:51,987 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:56:52]  *** Error codes and diagnostics ***
[2025-12-17 06:56:52]     "exeErrorCode": 0,
[2025-12-17 06:56:52]     "exeErrorDiag": "",
[2025-12-17 06:56:52]     "pilotErrorCode": 0,
[2025-12-17 06:56:52]     "pilotErrorDiag": "",
[2025-12-17 06:56:52]  *** Listing of results directory ***
[2025-12-17 06:56:52] total 404016
[2025-12-17 06:56:52] -rwx------. 1 boincer umatlas     36322 Dec 16 12:39 runpilot2-wrapper.sh
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:41 pilot3.tar.gz
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:41 queuedata.json
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:56:52] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:03 run_atlas
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:03 job.xml
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas 198501344 Dec 17 00:03 EVNT.47905855._000018.pool.root.1
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:03 start_atlas.sh
[2025-12-17 06:56:52] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:03 shared
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas    592376 Dec 17 00:03 input.tar.gz
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:03 boinc_lockfile
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas      2477 Dec 17 00:03 pandaJob.out
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas        57 Dec 17 00:03 setup.sh.local
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas    987409 Dec 17 00:03 agis_schedconf.cvmfs.json
[2025-12-17 06:56:52] drwx------. 5 boincer umatlas      4096 Dec 17 00:04 pilot3
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas 203975011 Dec 17 06:52 HITS.47905857._000446.pool.root.1
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas       531 Dec 17 06:53 boinc_task_state.xml
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas      1041 Dec 17 06:55 memory_monitor_summary.json
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas   1516240 Dec 17 06:55 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas    653549 Dec 17 06:55 log.47905857._000446.job.log.tgz.1
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas      7820 Dec 17 06:56 heartbeat.json
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas        95 Dec 17 06:56 pilot_heartbeat.json
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas      6843 Dec 17 06:56 init_data.xml
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas        28 Dec 17 06:56 wrapper_checkpoint.txt
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas      4824 Dec 17 06:56 pilotlog.txt
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas   3004715 Dec 17 06:56 log.47905857._000446.job.log.1
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas       357 Dec 17 06:56 output.list
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas       620 Dec 17 06:56 runtime_log
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas   3676160 Dec 17 06:56 result.tar.gz
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas       658 Dec 17 06:56 RyMODm5Bop8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgYaKDmVHiKkn.diag
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas      9350 Dec 17 06:56 runtime_log.err
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 06:56 boinc_mmap_file
[2025-12-17 06:56:52] -rw-r--r--. 1 boincer umatlas     21345 Dec 17 06:56 stderr.txt
[2025-12-17 06:56:52] HITS file was successfully produced:
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas 203975011 Dec 17 06:52 shared/HITS.pool.root.1
[2025-12-17 06:56:52]  *** Contents of shared directory: ***
[2025-12-17 06:56:52] total 397244
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas 198501344 Dec 17 00:03 ATLAS.root_0
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:03 start_atlas.sh
[2025-12-17 06:56:52] -rw-r--r--. 2 boincer umatlas    592376 Dec 17 00:03 input.tar.gz
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas 203975011 Dec 17 06:52 HITS.pool.root.1
[2025-12-17 06:56:52] -rw-------. 1 boincer umatlas   3676160 Dec 17 06:56 result.tar.gz
06:57:14 (1623326): run_atlas exited; CPU time 60883.328760
06:57:14 (1623326): called boinc_finish(0)

</stderr_txt>
]]>

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