Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:33 (2940093): wrapper (7.7.26015): starting
00:01:33 (2940093): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:01:33] Arguments: --nthreads 12
[2025-12-17 00:01:33] Threads: 12
[2025-12-17 00:01:33] Checking for CVMFS
[2025-12-17 00:01:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:01:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:01:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:01:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:01:35] 2.13.3.0 11830 59709 414536 154099 4 935 17258570 32935936 29089 16776704 0 321178786 99.498 406684508 32453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:01:35] CVMFS is ok
[2025-12-17 00:01:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:01:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:01:35] Further information can be found at the LHC@home message board.
[2025-12-17 00:01:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:01:35] Checking for apptainer binary...
[2025-12-17 00:01:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:01:35] Running /usr/bin/apptainer --version
[2025-12-17 00:01:35] apptainer version 1.4.5-2.el9
[2025-12-17 00:01:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:01:35] c6-8-25-1.aglt2.org
[2025-12-17 00:01:35] apptainer works
[2025-12-17 00:01:36] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:01:36] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:01:36] Starting ATLAS job with PandaID=6931484913
[2025-12-17 00:01:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:55:51]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:55:51] 2025-12-17 10:54:39,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 05:55:51] 2025-12-17 10:54:39,497 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2583.320197916668
[2025-12-17 05:55:51] 2025-12-17 10:54:39,536 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6931484913/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,537 | INFO     | extracted standard info from prmon json
[2025-12-17 05:55:51] 2025-12-17 10:54:39,537 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:55:51] 2025-12-17 10:54:39,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:55:51] 2025-12-17 10:54:39,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:55:51] 2025-12-17 10:54:39,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:55:51] 2025-12-17 10:54:39,590 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:55:51] 2025-12-17 10:54:39,591 | INFO     | sum of square deviations: 12513037418.722956
[2025-12-17 05:55:51] 2025-12-17 10:54:39,620 | INFO     | sum of deviations: 326940840656.48413
[2025-12-17 05:55:51] 2025-12-17 10:54:39,620 | INFO     | mean x: 1765958382.6793003
[2025-12-17 05:55:51] 2025-12-17 10:54:39,620 | INFO     | mean y: 2586263.3498542276
[2025-12-17 05:55:51] 2025-12-17 10:54:39,621 | INFO     | intersect: -46138402441.25034
[2025-12-17 05:55:51] 2025-12-17 10:54:39,621 | INFO     | chi2: 7.418820082625958
[2025-12-17 05:55:51] 2025-12-17 10:54:39,622 | INFO     | sum of square deviations: 11973771093.991154
[2025-12-17 05:55:51] 2025-12-17 10:54:39,629 | INFO     | sum of deviations: 346582788587.5123
[2025-12-17 05:55:51] 2025-12-17 10:54:39,629 | INFO     | mean x: 1765958230.1804733
[2025-12-17 05:55:51] 2025-12-17 10:54:39,629 | INFO     | mean y: 2591734.926035503
[2025-12-17 05:55:51] 2025-12-17 10:54:39,630 | INFO     | intersect: -51113361889.0884
[2025-12-17 05:55:51] 2025-12-17 10:54:39,630 | INFO     | chi2: 6.625191550155023
[2025-12-17 05:55:51] 2025-12-17 10:54:39,630 | INFO     | current chi2=6.625191550155023 (change=10.697503425504598 %)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,630 | INFO     | right removable region: 337
[2025-12-17 05:55:51] 2025-12-17 10:54:39,631 | INFO     | sum of square deviations: 11973691123.88169
[2025-12-17 05:55:51] 2025-12-17 10:54:39,638 | INFO     | sum of deviations: 210812492393.70392
[2025-12-17 05:55:51] 2025-12-17 10:54:39,638 | INFO     | mean x: 1765958535.1893492
[2025-12-17 05:55:51] 2025-12-17 10:54:39,638 | INFO     | mean y: 2619074.973372781
[2025-12-17 05:55:51] 2025-12-17 10:54:39,639 | INFO     | intersect: -31089390599.860435
[2025-12-17 05:55:51] 2025-12-17 10:54:39,639 | INFO     | chi2: 3.5125049576367617
[2025-12-17 05:55:51] 2025-12-17 10:54:39,643 | INFO     | current chi2=3.5125049576367617 (change=52.65412938288323 %)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,644 | INFO     | sum of square deviations: 11450086428.366423
[2025-12-17 05:55:51] 2025-12-17 10:54:39,647 | INFO     | sum of deviations: 138388629889.30627
[2025-12-17 05:55:51] 2025-12-17 10:54:39,651 | INFO     | mean x: 1765958687.6966968
[2025-12-17 05:55:51] 2025-12-17 10:54:39,652 | INFO     | mean y: 2640129.3693693695
[2025-12-17 05:55:51] 2025-12-17 10:54:39,652 | INFO     | intersect: -21341181575.418407
[2025-12-17 05:55:51] 2025-12-17 10:54:39,652 | INFO     | chi2: 2.0690767948542317
[2025-12-17 05:55:51] 2025-12-17 10:54:39,653 | INFO     | current chi2=2.0690767948542317 (change=41.09398222041739 %)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,653 | INFO     | sum of square deviations: 10941970395.313997
[2025-12-17 05:55:51] 2025-12-17 10:54:39,660 | INFO     | sum of deviations: 93322536739.65857
[2025-12-17 05:55:51] 2025-12-17 10:54:39,660 | INFO     | mean x: 1765958840.2042682
[2025-12-17 05:55:51] 2025-12-17 10:54:39,661 | INFO     | mean y: 2653649.2439024393
[2025-12-17 05:55:51] 2025-12-17 10:54:39,661 | INFO     | intersect: -15058962567.179644
[2025-12-17 05:55:51] 2025-12-17 10:54:39,661 | INFO     | chi2: 1.5717281782042138
[2025-12-17 05:55:51] 2025-12-17 10:54:39,661 | INFO     | current chi2=1.5717281782042138 (change=24.037223649065016 %)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,661 | INFO     | left removable region: 30
[2025-12-17 05:55:51] 2025-12-17 10:54:39,662 | INFO     | sum of square deviations: 8971954700.34534
[2025-12-17 05:55:51] 2025-12-17 10:54:39,668 | INFO     | sum of deviations: 30520970064.078186
[2025-12-17 05:55:51] 2025-12-17 10:54:39,669 | INFO     | mean x: 1765959114.7166123
[2025-12-17 05:55:51] 2025-12-17 10:54:39,669 | INFO     | mean y: 2688212.6905537457
[2025-12-17 05:55:51] 2025-12-17 10:54:39,669 | INFO     | intersect: -6004785863.452197
[2025-12-17 05:55:51] 2025-12-17 10:54:39,670 | INFO     | chi2: 0.11905203292404339
[2025-12-17 05:55:51] 2025-12-17 10:54:39,670 | INFO     | current memory leak: 3.40 B/s (using 307 data points, chi2=0.12)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,671 | INFO     | could have reported an average CPU frequency of 2537 MHz (15 samples)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,671 | INFO     | ..............................
[2025-12-17 05:55:51] 2025-12-17 10:54:39,671 | INFO     | . Timing measurements:
[2025-12-17 05:55:51] 2025-12-17 10:54:39,671 | INFO     | . get job = 0 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,675 | INFO     | . initial setup = 7 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,675 | INFO     | . payload setup = 49 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,676 | INFO     | . stage-in = 0 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,676 | INFO     | . payload execution = 20924 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,676 | INFO     | . stage-out = 5 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,676 | INFO     | . log creation = 0 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,676 | INFO     | ..............................
[2025-12-17 05:55:51] 2025-12-17 10:54:39,840 | INFO     | 
[2025-12-17 05:55:51] 2025-12-17 10:54:39,840 | INFO     | job summary report
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | --------------------------------------------------
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | PanDA job id: 6931484913
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | task id: 47905857
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | errors: (none)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | pilot state: finished 
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | transexitcode: 0
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | exeerrorcode: 0
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | exeerrordiag: 
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | exitcode: 0
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | exitmsg: OK
[2025-12-17 05:55:51] 2025-12-17 10:54:39,841 | INFO     | cpuconsumptiontime: 68223 s
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | nevents: 400
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | neventsw: 0
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | pid: 2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | pgrp: 2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | corecount: 12
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | event service: False
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | sizes: {0: 2283082, 1: 2283767, 2: 2283795, 3: 2283966, 14: 2283994, 25: 2284022, 36: 2284234, 37: 2284468, 47: 2284496, 20978: 2317870, 20985: 2327204, 21010: 232
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | --------------------------------------------------
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | 
[2025-12-17 05:55:51] 2025-12-17 10:54:39,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:55:51] 2025-12-17 10:54:39,975 | INFO     | job 6931484913 has completed (purged errors)
[2025-12-17 05:55:51] 2025-12-17 10:54:39,975 | INFO     | overall cleanup function is called
[2025-12-17 05:55:51] 2025-12-17 10:54:40,988 | INFO     | --- collectZombieJob: --- 10, [2977718]
[2025-12-17 05:55:51] 2025-12-17 10:54:40,989 | INFO     | zombie collector waiting for pid 2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:40,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:55:51] 2025-12-17 10:54:40,989 | INFO     | collected zombie processes
[2025-12-17 05:55:51] 2025-12-17 10:54:40,989 | INFO     | will attempt to kill all subprocesses of pid=2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:42,325 | INFO     | process IDs to be killed: [2977718] (in reverse order)
[2025-12-17 05:55:51] 2025-12-17 10:54:42,493 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:55:51] 2025-12-17 10:54:42,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:55:51] 2025-12-17 10:54:42,513 | INFO     | did not find any defunct processes belonging to 2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:42,532 | INFO     | did not find any defunct processes belonging to 2977718
[2025-12-17 05:55:51] 2025-12-17 10:54:42,532 | INFO     | ready for new job
[2025-12-17 05:55:51] 2025-12-17 10:54:42,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:55:51] 2025-12-17 10:54:42,537 | INFO     | ***************************************
[2025-12-17 05:55:51] 2025-12-17 10:54:42,537 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:55:51] 2025-12-17 10:54:42,537 | INFO     | ***************************************
[2025-12-17 05:55:51] 2025-12-17 10:54:42,537 | INFO     | 
[2025-12-17 05:55:51] 2025-12-17 10:54:42,587 | INFO     | architecture information:
[2025-12-17 05:55:51] 2025-12-17 10:54:42,594 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:55:51] 2025-12-17 10:54:42,710 | INFO     | cat /etc/os-release:
[2025-12-17 05:55:51] NAME="CentOS Linux"
[2025-12-17 05:55:51] VERSION="7 (Core)"
[2025-12-17 05:55:51] ID="centos"
[2025-12-17 05:55:51] ID_LIKE="rhel fedora"
[2025-12-17 05:55:51] VERSION_ID="7"
[2025-12-17 05:55:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:55:51] ANSI_COLOR="0;31"
[2025-12-17 05:55:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:55:51] HOME_URL="https://www.centos.org/"
[2025-12-17 05:55:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:55:51] 
[2025-12-17 05:55:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:55:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:55:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:55:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:55:51] 
[2025-12-17 05:55:51] 2025-12-17 10:54:42,710 | INFO     | ***************************************
[2025-12-17 05:55:51] 2025-12-17 10:54:43,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-17 05:55:51] 2025-12-17 10:54:43,330 | INFO     | sufficient remaining disk space (74390175744 B)
[2025-12-17 05:55:51] 2025-12-17 10:54:43,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:55:51] 2025-12-17 10:54:43,330 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:55:51] 2025-12-17 10:54:43,330 | INFO     | update_server=False
[2025-12-17 05:55:51] 2025-12-17 10:54:43,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:55:51] 2025-12-17 10:54:43,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:55:51] 2025-12-17 10:54:43,661 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 05:55:51] 2025-12-17 10:54:43,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 05:55:51] 2025-12-17 10:54:43,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:55:51] 2025-12-17 10:54:43,662 | INFO     | will abort loop
[2025-12-17 05:55:51] 2025-12-17 10:54:43,671 | INFO     | all data control threads have been joined
[2025-12-17 05:55:51] 2025-12-17 10:54:43,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:55:51] 2025-12-17 10:54:43,935 | INFO     | all payload control threads have been joined
[2025-12-17 05:55:51] 2025-12-17 10:54:44,336 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,502 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,527 | INFO     | [job] validate thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,659 | INFO     | all job control threads have been joined
[2025-12-17 05:55:51] 2025-12-17 10:54:44,668 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,678 | INFO     | [data] control thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,729 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:55:51] 2025-12-17 10:54:44,913 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,914 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:44,941 | INFO     | [payload] control thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,336 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,665 | INFO     | [job] control thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,684 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,755 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:45,873 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:54:47,834 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:55:51] 2025-12-17 10:55:13,876 | INFO     | PID=2951623 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:55:51] 2025-12-17 10:55:13,876 | INFO     | .. there are 24 such processes running
[2025-12-17 05:55:51] 2025-12-17 10:55:13,898 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:55:51] 2025-12-17 10:55:13,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:55:51] 2025-12-17 10:55:13,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:55:51] 2025-12-17 10:55:43,076 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:55:51] 2025-12-17 10:55:45,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395472975680)>', '<ExcThread(monitor, started 140394729813760)>']
[2025-12-17 05:55:51] 2025-12-17 10:55:46,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:55:51] 2025-12-17 10:55:46,167 | INFO     | [monitor] control thread has ended
[2025-12-17 05:55:51] 2025-12-17 10:55:50,226 | INFO     | all workflow threads have been joined
[2025-12-17 05:55:51] 2025-12-17 10:55:50,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:55:51] 2025-12-17 10:55:50,231 | INFO     | traces error code: 0
[2025-12-17 05:55:51] 2025-12-17 10:55:50,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:55:51] 2025-12-17 10:55:50,615 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:55:51] 2025-12-17 10:55:50,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:55:51] 2025-12-17 10:55:50,646 [wrapper] pilotpid: 2951623
[2025-12-17 05:55:51] 2025-12-17 10:55:50,662 [wrapper] Pilot exit status: 0
[2025-12-17 05:55:51] 2025-12-17 10:55:50,767 [wrapper] pandaids: 6931484913
[2025-12-17 05:55:51] 2025-12-17 10:55:50,877 [wrapper] cleanup supervisor_pilot 3986383 2951624
[2025-12-17 05:55:51] 2025-12-17 10:55:50,893 [wrapper] Test setup, not cleaning
[2025-12-17 05:55:51] 2025-12-17 10:55:50,916 [wrapper] apfmon messages muted
[2025-12-17 05:55:51] 2025-12-17 10:55:50,936 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:55:51] 2025-12-17 10:55:50,974 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:55:51]  *** Error codes and diagnostics ***
[2025-12-17 05:55:51]     "exeErrorCode": 0,
[2025-12-17 05:55:51]     "exeErrorDiag": "",
[2025-12-17 05:55:51]     "pilotErrorCode": 0,
[2025-12-17 05:55:51]     "pilotErrorDiag": "",
[2025-12-17 05:55:51]  *** Listing of results directory ***
[2025-12-17 05:55:51] total 404460
[2025-12-17 05:55:51] -rwx------. 1 boincer umatlas     36322 Dec 16 12:39 runpilot2-wrapper.sh
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:41 pilot3.tar.gz
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:41 queuedata.json
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:55:51] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:01 run_atlas
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:01 job.xml
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas 199265422 Dec 17 00:01 EVNT.47905855._000017.pool.root.1
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:01 start_atlas.sh
[2025-12-17 05:55:51] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:01 shared
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas    592374 Dec 17 00:01 input.tar.gz
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:01 boinc_lockfile
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas      2477 Dec 17 00:01 pandaJob.out
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas        57 Dec 17 00:01 setup.sh.local
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas    987409 Dec 17 00:03 agis_schedconf.cvmfs.json
[2025-12-17 05:55:51] drwx------. 5 boincer umatlas      4096 Dec 17 00:03 pilot3
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas      6877 Dec 17 05:46 init_data.xml
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas 204656214 Dec 17 05:53 HITS.47905857._000407.pool.root.1
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas       531 Dec 17 05:53 boinc_task_state.xml
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas      1057 Dec 17 05:54 memory_monitor_summary.json
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas   1516240 Dec 17 05:54 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas    590089 Dec 17 05:54 log.47905857._000407.job.log.tgz.1
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas      7822 Dec 17 05:54 heartbeat.json
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas        95 Dec 17 05:55 pilot_heartbeat.json
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas      5010 Dec 17 05:55 pilotlog.txt
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas        28 Dec 17 05:55 wrapper_checkpoint.txt
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 05:55 boinc_mmap_file
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas   2572021 Dec 17 05:55 log.47905857._000407.job.log.1
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas       357 Dec 17 05:55 output.list
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas       620 Dec 17 05:55 runtime_log
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas   3184640 Dec 17 05:55 result.tar.gz
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas      9350 Dec 17 05:55 runtime_log.err
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas       657 Dec 17 05:55 gz3NDm5Bop8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUYaKDm3j5JHm.diag
[2025-12-17 05:55:51] -rw-r--r--. 1 boincer umatlas     21228 Dec 17 05:55 stderr.txt
[2025-12-17 05:55:51] HITS file was successfully produced:
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas 204656214 Dec 17 05:53 shared/HITS.pool.root.1
[2025-12-17 05:55:51]  *** Contents of shared directory: ***
[2025-12-17 05:55:51] total 398172
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas 199265422 Dec 17 00:01 ATLAS.root_0
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:01 start_atlas.sh
[2025-12-17 05:55:51] -rw-r--r--. 2 boincer umatlas    592374 Dec 17 00:01 input.tar.gz
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas 204656214 Dec 17 05:53 HITS.pool.root.1
[2025-12-17 05:55:51] -rw-------. 1 boincer umatlas   3184640 Dec 17 05:55 result.tar.gz
05:55:52 (2940093): run_atlas exited; CPU time 69207.647505
05:55:52 (2940093): called boinc_finish(0)

</stderr_txt>
]]>

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