Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:53 (15965): wrapper (7.7.26015): starting
23:12:53 (15965): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 23:12:53] Arguments: --nthreads 12
[2025-12-16 23:12:53] Threads: 12
[2025-12-16 23:12:53] Checking for CVMFS
[2025-12-16 23:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 23:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 23:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 23:12:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 23:12:54] 2.11.2.0 2998 133139 99460 154097 3 59 13634989 20275201 1 130560 0 57241898 99.957 5868692 35542 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 23:12:54] CVMFS is ok
[2025-12-16 23:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 23:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 23:12:54] Further information can be found at the LHC@home message board.
[2025-12-16 23:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 23:12:54] Checking for apptainer binary...
[2025-12-16 23:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 23:12:54] Running /usr/bin/apptainer --version
[2025-12-16 23:12:54] apptainer version 1.3.2-1.el7
[2025-12-16 23:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 23:12:55] c-205-12.aglt2.org
[2025-12-16 23:12:55] apptainer works
[2025-12-16 23:12:55] Set ATHENA_PROC_NUMBER=12
[2025-12-16 23:12:55] Set ATHENA_CORE_NUMBER=12
[2025-12-16 23:12:55] Starting ATLAS job with PandaID=6931732129
[2025-12-16 23:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 00:29:23]  *** The last 200 lines of the pilot log: ***
[2025-12-17 00:29:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 00:29:23]  replicas=None
[2025-12-17 00:29:23]  scope=mc23_13p6TeV
[2025-12-17 00:29:23]  status=None
[2025-12-17 00:29:23]  status_code=0
[2025-12-17 00:29:23]  storage_token=
[2025-12-17 00:29:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6931732129/log.47886831._015797.job.log.tgz.1
[2025-12-17 00:29:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/1d/log.47886831._015797.job.log.tgz.1
[2025-12-17 00:29:23]  workdir=None
[2025-12-17 00:29:23] ]
[2025-12-17 00:29:23] 2025-12-17 05:28:34,474 | INFO     | transferring file log.47886831._015797.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931732129/log.47886831._015797.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-17 00:29:23] 2025-12-17 05:28:34,474 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931732129/log.47886831._015797.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._015797.job
[2025-12-17 00:29:23] 2025-12-17 05:28:34,497 | INFO     | adding to output.list: log.47886831._015797.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/1d/log.47886831._015797.job.log.tg
[2025-12-17 00:29:23] 2025-12-17 05:28:34,498 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 00:29:23] 2025-12-17 05:28:34,498 | INFO     | summary of transferred files:
[2025-12-17 00:29:23] 2025-12-17 05:28:34,498 | INFO     |  -- lfn=log.47886831._015797.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 00:29:23] 2025-12-17 05:28:34,498 | INFO     | stage-out finished correctly
[2025-12-17 00:29:23] 2025-12-17 05:28:35,873 | INFO     | monitor loop #337: job 0:6931732129 is in state 'finished'
[2025-12-17 00:29:23] 2025-12-17 05:28:35,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 00:29:23] 2025-12-17 05:28:36,054 | INFO     | time since job start (4526s) is within the limit (174528.0s)
[2025-12-17 00:29:23] 2025-12-17 05:28:36,162 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 00:29:23] 2025-12-17 05:28:37,175 | INFO     | PID=19695 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 00:29:23] 2025-12-17 05:28:37,239 | INFO     | job 6931732129 has state=finished
[2025-12-17 00:29:23] 2025-12-17 05:28:37,240 | INFO     | preparing for final server update for job 6931732129 in state='finished'
[2025-12-17 00:29:23] 2025-12-17 05:28:37,240 | INFO     | this job has now completed (state=finished)
[2025-12-17 00:29:23] 2025-12-17 05:28:37,240 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 00:29:23] 2025-12-17 05:28:37,241 | INFO     | log transfer has been attempted: DONE
[2025-12-17 00:29:23] 2025-12-17 05:28:37,241 | INFO     | job 6931732129 has finished - writing final server update
[2025-12-17 00:29:23] 2025-12-17 05:28:37,241 | INFO     | total number of processed events: 400 (read)
[2025-12-17 00:29:23] 2025-12-17 05:28:37,242 | INFO     | executing command: lscpu
[2025-12-17 00:29:23] 2025-12-17 05:28:37,269 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 00:29:23] 2025-12-17 05:28:38,175 | INFO     | time since job start (4528s) is within the limit (174528.0s)
[2025-12-17 00:29:23] 2025-12-17 05:28:38,377 | INFO     | monitor loop #338: job 0:6931732129 is in state 'finished'
[2025-12-17 00:29:23] 2025-12-17 05:28:38,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 00:29:23] 2025-12-17 05:28:40,181 | INFO     | time since job start (4530s) is within the limit (174528.0s)
[2025-12-17 00:29:23] 2025-12-17 05:28:40,880 | INFO     | monitor loop #339: job 0:6931732129 is in state 'finished'
[2025-12-17 00:29:23] 2025-12-17 05:28:40,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,106 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-17 00:29:23] 2025-12-17 05:28:42,110 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-17 00:29:23] 2025-12-17 05:28:42,112 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931732129/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,113 | INFO     | extracted standard info from prmon json
[2025-12-17 00:29:23] 2025-12-17 05:28:42,113 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 00:29:23] 2025-12-17 05:28:42,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 00:29:23] 2025-12-17 05:28:42,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 00:29:23] 2025-12-17 05:28:42,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 00:29:23] 2025-12-17 05:28:42,116 | INFO     | fitting pss+swap vs Time
[2025-12-17 00:29:23] 2025-12-17 05:28:42,116 | INFO     | sum of square deviations: 93240818.0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,117 | INFO     | sum of deviations: 553966620.0000002
[2025-12-17 00:29:23] 2025-12-17 05:28:42,117 | INFO     | mean x: 1765947137.0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,117 | INFO     | mean y: 2719887.656716418
[2025-12-17 00:29:23] 2025-12-17 05:28:42,117 | INFO     | intersect: -10489206154.675594
[2025-12-17 00:29:23] 2025-12-17 05:28:42,117 | INFO     | chi2: 0.044222884391312466
[2025-12-17 00:29:23] 2025-12-17 05:28:42,118 | INFO     | current memory leak: 5.94 B/s (using 67 data points, chi2=0.04)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,118 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,118 | INFO     | ..............................
[2025-12-17 00:29:23] 2025-12-17 05:28:42,118 | INFO     | . Timing measurements:
[2025-12-17 00:29:23] 2025-12-17 05:28:42,118 | INFO     | . get job = 0 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . initial setup = 2 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . payload setup = 7 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . stage-in = 0 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . payload execution = 4496 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . stage-out = 0 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | . log creation = 0 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,119 | INFO     | ..............................
[2025-12-17 00:29:23] 2025-12-17 05:28:42,193 | INFO     | time since job start (4532s) is within the limit (174528.0s)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,202 | INFO     | 
[2025-12-17 00:29:23] 2025-12-17 05:28:42,202 | INFO     | job summary report
[2025-12-17 00:29:23] 2025-12-17 05:28:42,202 | INFO     | --------------------------------------------------
[2025-12-17 00:29:23] 2025-12-17 05:28:42,202 | INFO     | PanDA job id: 6931732129
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | task id: 47886831
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | errors: (none)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | pilot state: finished 
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | transexitcode: 0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | exeerrorcode: 0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,203 | INFO     | exeerrordiag: 
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | exitcode: 0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | exitmsg: OK
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | cpuconsumptiontime: 48462 s
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | nevents: 400
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | neventsw: 0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,204 | INFO     | pid: 26081
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | pgrp: 26081
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | corecount: 12
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | event service: False
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | sizes: {0: 2283994, 5: 2284256, 11: 2284312, 4506: 2310410, 4507: 2310409, 4508: 2319463, 4509: 2319647, 4515: 2319841}
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | --------------------------------------------------
[2025-12-17 00:29:23] 2025-12-17 05:28:42,205 | INFO     | 
[2025-12-17 00:29:23] 2025-12-17 05:28:42,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 00:29:23] 2025-12-17 05:28:42,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | job 6931732129 has completed (purged errors)
[2025-12-17 00:29:23] 2025-12-17 05:28:42,233 | INFO     | overall cleanup function is called
[2025-12-17 00:29:23] 2025-12-17 05:28:43,241 | INFO     | --- collectZombieJob: --- 10, [26081]
[2025-12-17 00:29:23] 2025-12-17 05:28:43,242 | INFO     | zombie collector waiting for pid 26081
[2025-12-17 00:29:23] 2025-12-17 05:28:43,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 00:29:23] 2025-12-17 05:28:43,242 | INFO     | collected zombie processes
[2025-12-17 00:29:23] 2025-12-17 05:28:43,242 | INFO     | will attempt to kill all subprocesses of pid=26081
[2025-12-17 00:29:23] 2025-12-17 05:28:43,336 | INFO     | process IDs to be killed: [26081] (in reverse order)
[2025-12-17 00:29:23] 2025-12-17 05:28:43,405 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 00:29:23] 2025-12-17 05:28:43,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 00:29:23] 2025-12-17 05:28:43,408 | INFO     | did not find any defunct processes belonging to 26081
[2025-12-17 00:29:23] 2025-12-17 05:28:43,412 | INFO     | did not find any defunct processes belonging to 26081
[2025-12-17 00:29:23] 2025-12-17 05:28:43,412 | INFO     | ready for new job
[2025-12-17 00:29:23] 2025-12-17 05:28:43,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 00:29:23] 2025-12-17 05:28:43,413 | INFO     | ***************************************
[2025-12-17 00:29:23] 2025-12-17 05:28:43,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 00:29:23] 2025-12-17 05:28:43,413 | INFO     | ***************************************
[2025-12-17 00:29:23] 2025-12-17 05:28:43,413 | INFO     | 
[2025-12-17 00:29:23] 2025-12-17 05:28:43,414 | INFO     | architecture information:
[2025-12-17 00:29:23] 2025-12-17 05:28:43,415 | INFO     | executing command: cat /etc/os-release
[2025-12-17 00:29:23] 2025-12-17 05:28:43,430 | INFO     | cat /etc/os-release:
[2025-12-17 00:29:23] NAME="CentOS Linux"
[2025-12-17 00:29:23] VERSION="7 (Core)"
[2025-12-17 00:29:23] ID="centos"
[2025-12-17 00:29:23] ID_LIKE="rhel fedora"
[2025-12-17 00:29:23] VERSION_ID="7"
[2025-12-17 00:29:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 00:29:23] ANSI_COLOR="0;31"
[2025-12-17 00:29:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 00:29:23] HOME_URL="https://www.centos.org/"
[2025-12-17 00:29:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 00:29:23] 
[2025-12-17 00:29:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 00:29:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 00:29:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 00:29:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 00:29:23] 
[2025-12-17 00:29:23] 2025-12-17 05:28:43,430 | INFO     | ***************************************
[2025-12-17 00:29:23] 2025-12-17 05:28:43,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 00:29:23] 2025-12-17 05:28:43,949 | INFO     | sufficient remaining disk space (29458694144 B)
[2025-12-17 00:29:23] 2025-12-17 05:28:43,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 00:29:23] 2025-12-17 05:28:43,950 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 00:29:23] 2025-12-17 05:28:43,950 | INFO     | update_server=False
[2025-12-17 00:29:23] 2025-12-17 05:28:43,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 00:29:23] 2025-12-17 05:28:43,950 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 00:29:23] 2025-12-17 05:28:43,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:29:23] 2025-12-17 05:28:43,951 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 00:29:23] 2025-12-17 05:28:43,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 00:29:23] 2025-12-17 05:28:43,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 00:29:23] 2025-12-17 05:28:44,218 | INFO     | all data control threads have been joined
[2025-12-17 00:29:23] 2025-12-17 05:28:44,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:29:23] 2025-12-17 05:28:44,388 | INFO     | aborting loop
[2025-12-17 00:29:23] 2025-12-17 05:28:44,573 | INFO     | all payload control threads have been joined
[2025-12-17 00:29:23] 2025-12-17 05:28:44,953 | INFO     | [job] retrieve thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:44,956 | INFO     | [job] queue monitor thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,064 | INFO     | all job control threads have been joined
[2025-12-17 00:29:23] 2025-12-17 05:28:45,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 00:29:23] 2025-12-17 05:28:45,224 | INFO     | [data] control thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,326 | INFO     | [job] validate thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,330 | INFO     | [payload] failed_post thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,394 | INFO     | [job] job monitor thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,408 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,578 | INFO     | [payload] control thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,900 | INFO     | [payload] validate_post thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,928 | INFO     | [data] copytool_in thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:45,929 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:46,069 | INFO     | [job] control thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:46,071 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:46,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 00:29:23] 2025-12-17 05:28:47,097 | INFO     | [data] copytool_out thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:50,754 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:28:54,352 | INFO     | job.realtimelogging is not enabled
[2025-12-17 00:29:23] 2025-12-17 05:28:55,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 00:29:23] 2025-12-17 05:29:17,128 | INFO     | [monitor] cgroup control has ended
[2025-12-17 00:29:23] 2025-12-17 05:29:18,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613919647552)>', '<ExcThread(monitor, started 140613244667648)>']
[2025-12-17 00:29:23] 2025-12-17 05:29:19,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 00:29:23] 2025-12-17 05:29:19,127 | INFO     | [monitor] control thread has ended
[2025-12-17 00:29:23] 2025-12-17 05:29:23,464 | INFO     | all workflow threads have been joined
[2025-12-17 00:29:23] 2025-12-17 05:29:23,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 00:29:23] 2025-12-17 05:29:23,464 | INFO     | traces error code: 0
[2025-12-17 00:29:23] 2025-12-17 05:29:23,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 00:29:23] 2025-12-17 05:29:23,552 [wrapper] ==== pilot stdout END ====
[2025-12-17 00:29:23] 2025-12-17 05:29:23,556 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 00:29:23] 2025-12-17 05:29:23,559 [wrapper] pilotpid: 19695
[2025-12-17 00:29:23] 2025-12-17 05:29:23,563 [wrapper] Pilot exit status: 0
[2025-12-17 00:29:23] 2025-12-17 05:29:23,580 [wrapper] pandaids: 6931732129
[2025-12-17 00:29:23] 2025-12-17 05:29:23,622 [wrapper] cleanup supervisor_pilot 22279 19696
[2025-12-17 00:29:23] 2025-12-17 05:29:23,626 [wrapper] Test setup, not cleaning
[2025-12-17 00:29:23] 2025-12-17 05:29:23,630 [wrapper] apfmon messages muted
[2025-12-17 00:29:23] 2025-12-17 05:29:23,634 [wrapper] ==== wrapper stdout END ====
[2025-12-17 00:29:23] 2025-12-17 05:29:23,638 [wrapper] ==== wrapper stderr END ====
[2025-12-17 00:29:23]  *** Error codes and diagnostics ***
[2025-12-17 00:29:23]     "exeErrorCode": 0,
[2025-12-17 00:29:23]     "exeErrorDiag": "",
[2025-12-17 00:29:23]     "pilotErrorCode": 0,
[2025-12-17 00:29:23]     "pilotErrorDiag": "",
[2025-12-17 00:29:23]  *** Listing of results directory ***
[2025-12-17 00:29:23] total 335564
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 17:36 pilot3.tar.gz
[2025-12-17 00:29:23] -rwx------ 1 boincer umatlas     36322 Dec 16 17:39 runpilot2-wrapper.sh
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 17:42 queuedata.json
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas       100 Dec 16 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 00:29:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 23:12 run_atlas
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas       105 Dec 16 23:12 job.xml
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas 191100204 Dec 16 23:12 EVNT.47886829._000610.pool.root.1
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 23:12 start_atlas.sh
[2025-12-17 00:29:23] drwxrwx--x 2 boincer umatlas      4096 Dec 16 23:12 shared
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas    592419 Dec 16 23:12 input.tar.gz
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas         0 Dec 16 23:12 boinc_lockfile
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas      2540 Dec 16 23:12 pandaJob.out
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas        57 Dec 16 23:12 setup.sh.local
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas    987409 Dec 16 23:13 agis_schedconf.cvmfs.json
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas   1516240 Dec 16 23:13 agis_ddmendpoints.agis.ALL.json
[2025-12-17 00:29:23] drwx------ 5 boincer umatlas      4096 Dec 16 23:13 pilot3
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas      5953 Dec 17 00:18 init_data.xml
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas 146490174 Dec 17 00:28 HITS.47886831._015797.pool.root.1
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas        95 Dec 17 00:28 pilot_heartbeat.json
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas       529 Dec 17 00:28 boinc_task_state.xml
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas      1044 Dec 17 00:28 memory_monitor_summary.json
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas    395846 Dec 17 00:28 log.47886831._015797.job.log.tgz.1
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas      7846 Dec 17 00:28 heartbeat.json
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas      8192 Dec 17 00:29 boinc_mmap_file
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas      4624 Dec 17 00:29 pilotlog.txt
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas        27 Dec 17 00:29 wrapper_checkpoint.txt
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas    657593 Dec 17 00:29 log.47886831._015797.job.log.1
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas       357 Dec 17 00:29 output.list
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas       620 Dec 17 00:29 runtime_log
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas   1075200 Dec 17 00:29 result.tar.gz
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas       659 Dec 17 00:29 zLnMDm3ssp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGRWKDm1SOclm.diag
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas      9344 Dec 17 00:29 runtime_log.err
[2025-12-17 00:29:23] -rw-r--r-- 1 boincer umatlas     21934 Dec 17 00:29 stderr.txt
[2025-12-17 00:29:23] HITS file was successfully produced:
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas 146490174 Dec 17 00:28 shared/HITS.pool.root.1
[2025-12-17 00:29:23]  *** Contents of shared directory: ***
[2025-12-17 00:29:23] total 331336
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas 191100204 Dec 16 23:12 ATLAS.root_0
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 23:12 start_atlas.sh
[2025-12-17 00:29:23] -rw-r--r-- 2 boincer umatlas    592419 Dec 16 23:12 input.tar.gz
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas 146490174 Dec 17 00:28 HITS.pool.root.1
[2025-12-17 00:29:23] -rw------- 1 boincer umatlas   1075200 Dec 17 00:29 result.tar.gz
00:29:25 (15965): run_atlas exited; CPU time 48446.147199
00:29:25 (15965): called boinc_finish(0)

</stderr_txt>
]]>

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