Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:00 (849593): wrapper (7.7.26015): starting
13:34:00 (849593): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 13:34:00] Arguments: --nthreads 3
[2025-12-17 13:34:00] Threads: 3
[2025-12-17 13:34:00] Checking for CVMFS
[2025-12-17 13:34:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:34:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:34:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:34:00] 2.9.2.0 3564296 5858 87940 154111 1 57 31196938 36864000 0 130560 0 3912250 99.989 217466 7275 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 13:34:00] CVMFS is ok
[2025-12-17 13:34:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:34:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:34:00] Further information can be found at the LHC@home message board.
[2025-12-17 13:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:34:00] Checking for apptainer binary...
[2025-12-17 13:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:34:00] Running /usr/bin/apptainer --version
[2025-12-17 13:34:00] apptainer version 1.4.1-1.1
[2025-12-17 13:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:34:00] thA371b
[2025-12-17 13:34:00] apptainer works
[2025-12-17 13:34:00] Set ATHENA_PROC_NUMBER=3
[2025-12-17 13:34:00] Set ATHENA_CORE_NUMBER=3
[2025-12-17 13:34:00] Starting ATLAS job with PandaID=6931731544
[2025-12-17 13:34:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:03:19]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:03:19] 2025-12-17 14:02:36,299 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 15:03:19] 2025-12-17 14:02:36,420 | INFO     | [payload] failed_post thread has finished
[2025-12-17 15:03:19] 2025-12-17 14:02:36,569 | INFO     | [job] control thread has finished
[2025-12-17 15:03:19] 2025-12-17 14:02:38,429 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:03:19] 2025-12-17 14:02:45,001 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:03:19] 2025-12-17 14:02:46,007 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:03:19] 2025-12-17 14:03:02,830 | INFO     | 5307s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 15:03:19] 2025-12-17 14:03:03,889 | INFO     | PID=853313 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 15:03:19] 2025-12-17 14:03:03,889 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:03:19] 2025-12-17 14:03:03,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:03:19] 2025-12-17 14:03:03,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:03:19] 2025-12-17 14:03:11,905 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:03:19] 2025-12-17 14:03:14,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183052388160)>', '<ExcThread(monitor, started 140182405760768)>']
[2025-12-17 15:03:19] 2025-12-17 14:03:14,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:03:19] 2025-12-17 14:03:14,948 | INFO     | [monitor] control thread has ended
[2025-12-17 15:03:19] 2025-12-17 14:03:19,035 | INFO     | all workflow threads have been joined
[2025-12-17 15:03:19] 2025-12-17 14:03:19,035 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:03:19] 2025-12-17 14:03:19,035 | INFO     | traces error code: 0
[2025-12-17 15:03:19] 2025-12-17 14:03:19,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:03:19] 2025-12-17 14:03:19,086 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:03:19] 2025-12-17 14:03:19,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:03:19] 2025-12-17 14:03:19,091 [wrapper] pilotpid: 853313
[2025-12-17 15:03:19] 2025-12-17 14:03:19,093 [wrapper] Pilot exit status: 0
[2025-12-17 15:03:19] 2025-12-17 14:03:19,100 [wrapper] pandaids: 6931731544
[2025-12-17 15:03:19] 2025-12-17 14:03:19,116 [wrapper] cleanup supervisor_pilot  871487 853314
[2025-12-17 15:03:19] 2025-12-17 14:03:19,118 [wrapper] Test setup, not cleaning
[2025-12-17 15:03:19] 2025-12-17 14:03:19,120 [wrapper] apfmon messages muted
[2025-12-17 15:03:19] 2025-12-17 14:03:19,122 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:03:19] 2025-12-17 14:03:19,125 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:03:19]  *** Error codes and diagnostics ***
[2025-12-17 15:03:19]     "exeErrorCode": 0,
[2025-12-17 15:03:19]     "exeErrorDiag": "",
[2025-12-17 15:03:19]     "pilotErrorCode": 0,
[2025-12-17 15:03:19]     "pilotErrorDiag": "",
[2025-12-17 15:03:19]  *** Listing of results directory ***
[2025-12-17 15:03:19] total 339592
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc    579449 Dec 16 23:36 pilot3.tar.gz
[2025-12-17 15:03:19] -rwx------ 1 boinc boinc     36322 Dec 16 23:39 runpilot2-wrapper.sh
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      5112 Dec 16 23:42 queuedata.json
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:03:19] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:34 run_atlas
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:34 job.xml
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc 190956261 Dec 17 13:34 EVNT.47886829._000307.pool.root.1
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc    592425 Dec 17 13:34 input.tar.gz
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:34 start_atlas.sh
[2025-12-17 15:03:19] drwxrwx--x 2 boinc boinc      4096 Dec 17 13:34 shared
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:34 boinc_setup_complete
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      6440 Dec 17 13:34 init_data.xml
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:34 boinc_lockfile
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      2538 Dec 17 13:34 pandaJob.out
[2025-12-17 15:03:19] -rw------- 1 boinc boinc    987423 Dec 17 13:34 agis_schedconf.cvmfs.json
[2025-12-17 15:03:19] -rw------- 1 boinc boinc   1516240 Dec 17 13:34 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:03:19] drwx------ 5 boinc boinc      4096 Dec 17 13:34 pilot3
[2025-12-17 15:03:19] -rw------- 1 boinc boinc 150813261 Dec 17 15:02 HITS.47886831._015324.pool.root.1
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc       529 Dec 17 15:02 boinc_task_state.xml
[2025-12-17 15:03:19] -rw------- 1 boinc boinc      1015 Dec 17 15:02 memory_monitor_summary.json
[2025-12-17 15:03:19] -rw------- 1 boinc boinc    259565 Dec 17 15:02 log.47886831._015324.job.log.tgz.1
[2025-12-17 15:03:19] -rw------- 1 boinc boinc        95 Dec 17 15:02 pilot_heartbeat.json
[2025-12-17 15:03:19] -rw------- 1 boinc boinc      7747 Dec 17 15:02 heartbeat.json
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc        27 Dec 17 15:02 wrapper_checkpoint.txt
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      8192 Dec 17 15:02 boinc_mmap_file
[2025-12-17 15:03:19] -rw------- 1 boinc boinc      4938 Dec 17 15:03 pilotlog.txt
[2025-12-17 15:03:19] -rw------- 1 boinc boinc    774855 Dec 17 15:03 log.47886831._015324.job.log.1
[2025-12-17 15:03:19] -rw------- 1 boinc boinc       357 Dec 17 15:03 output.list
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc       620 Dec 17 15:03 runtime_log
[2025-12-17 15:03:19] -rw------- 1 boinc boinc   1054720 Dec 17 15:03 result.tar.gz
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      8902 Dec 17 15:03 runtime_log.err
[2025-12-17 15:03:19] -rw------- 1 boinc boinc       659 Dec 17 15:03 G0bNDmtssp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRPWKDmoyR2Vm.diag
[2025-12-17 15:03:19] -rw-r--r-- 1 boinc boinc      5441 Dec 17 15:03 stderr.txt
[2025-12-17 15:03:19] HITS file was successfully produced:
[2025-12-17 15:03:19] -rw------- 1 boinc boinc 150813261 Dec 17 15:02 shared/HITS.pool.root.1
[2025-12-17 15:03:19]  *** Contents of shared directory: ***
[2025-12-17 15:03:19] total 335400
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc 190956261 Dec 17 13:34 ATLAS.root_0
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc    592425 Dec 17 13:34 input.tar.gz
[2025-12-17 15:03:19] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:34 start_atlas.sh
[2025-12-17 15:03:19] -rw------- 1 boinc boinc 150813261 Dec 17 15:02 HITS.pool.root.1
[2025-12-17 15:03:19] -rw------- 1 boinc boinc   1054720 Dec 17 15:03 result.tar.gz
15:03:20 (849593): run_atlas exited; CPU time 15132.936063
15:03:20 (849593): called boinc_finish(0)

</stderr_txt>
]]>

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