Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:32 (31155): wrapper (7.7.26015): starting
10:07:32 (31155): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 10:07:32] Arguments: --nthreads 8
[2025-12-17 10:07:32] Threads: 8
[2025-12-17 10:07:32] Checking for CVMFS
[2025-12-17 10:07:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 10:07:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 10:07:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 10:07:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 10:07:34] 2.11.2.0 6904 2095 58800 154105 1 208 13560612 25165824 4712 130560 0 1823786 99.989 405090 2043 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 10:07:34] CVMFS is ok
[2025-12-17 10:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 10:07:34] Checking for apptainer binary...
[2025-12-17 10:07:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 10:07:34] Running /usr/bin/apptainer --version
[2025-12-17 10:07:35] apptainer version 1.3.2-1.el7
[2025-12-17 10:07:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 10:07:53] cg-vwn474.simple-grid.lan
[2025-12-17 10:07:53] apptainer works
[2025-12-17 10:07:53] Set ATHENA_PROC_NUMBER=8
[2025-12-17 10:07:53] Set ATHENA_CORE_NUMBER=8
[2025-12-17 10:07:53] Starting ATLAS job with PandaID=6931596491
[2025-12-17 10:07:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 14:15:24]  *** The last 200 lines of the pilot log: ***
[2025-12-17 14:15:24] 2025-12-17 13:14:35,260 | INFO     | time since job start (14565s) is within the limit (174528.0s)
[2025-12-17 14:15:24] 2025-12-17 13:14:35,640 | INFO     | monitor loop #1057: job 0:6931596491 is in state 'finished'
[2025-12-17 14:15:24] 2025-12-17 13:14:35,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 14:15:24] 2025-12-17 13:14:36,443 | INFO     | PID=2535 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-17 14:15:24] 2025-12-17 13:14:36,443 | INFO     | .. there are 9 such processes running
[2025-12-17 14:15:24] 2025-12-17 13:14:37,406 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 14:15:24] 2025-12-17 13:14:37,407 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-17 14:15:24] 2025-12-17 13:14:37,408 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6931596491/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,409 | INFO     | extracted standard info from prmon json
[2025-12-17 14:15:24] 2025-12-17 13:14:37,409 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 14:15:24] 2025-12-17 13:14:37,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 14:15:24] 2025-12-17 13:14:37,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 14:15:24] 2025-12-17 13:14:37,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 14:15:24] 2025-12-17 13:14:37,414 | INFO     | fitting pss+swap vs Time
[2025-12-17 14:15:24] 2025-12-17 13:14:37,415 | INFO     | sum of square deviations: 3772712597.5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,416 | INFO     | sum of deviations: 29984061054.500004
[2025-12-17 14:15:24] 2025-12-17 13:14:37,417 | INFO     | mean x: 1765970148.5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,417 | INFO     | mean y: 2442717.065217391
[2025-12-17 14:15:24] 2025-12-17 13:14:37,417 | INFO     | intersect: -14032805233.742527
[2025-12-17 14:15:24] 2025-12-17 13:14:37,417 | INFO     | chi2: 4.685490037083816
[2025-12-17 14:15:24] 2025-12-17 13:14:37,418 | INFO     | sum of square deviations: 3531973200.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,419 | INFO     | sum of deviations: 45036015862.00002
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | mean x: 1765969996.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | mean y: 2452075.76
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | intersect: -22515344138.45593
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | chi2: 3.8731388243015163
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | current chi2=3.8731388243015163 (change=17.3375934289233 %)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,420 | INFO     | right removable region: 224
[2025-12-17 14:15:24] 2025-12-17 13:14:37,421 | INFO     | sum of square deviations: 3531973200.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,422 | INFO     | sum of deviations: -38241058478.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,422 | INFO     | mean x: 1765970301.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,423 | INFO     | mean y: 2485817.151111111
[2025-12-17 14:15:24] 2025-12-17 13:14:37,423 | INFO     | intersect: 19122838585.103107
[2025-12-17 14:15:24] 2025-12-17 13:14:37,423 | INFO     | chi2: 1.1234942997532826
[2025-12-17 14:15:24] 2025-12-17 13:14:37,423 | INFO     | current chi2=1.1234942997532826 (change=76.02183995993448 %)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,424 | INFO     | sum of square deviations: 3301699115.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,425 | INFO     | sum of deviations: -45108756379.5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,425 | INFO     | mean x: 1765970453.5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,425 | INFO     | mean y: 2490322.3772727274
[2025-12-17 14:15:24] 2025-12-17 13:14:37,426 | INFO     | intersect: 24129683075.471806
[2025-12-17 14:15:24] 2025-12-17 13:14:37,426 | INFO     | chi2: 1.0457373554379923
[2025-12-17 14:15:24] 2025-12-17 13:14:37,426 | INFO     | current chi2=1.0457373554379923 (change=6.9209914400425205 %)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,426 | INFO     | left removable region: 20
[2025-12-17 14:15:24] 2025-12-17 13:14:37,427 | INFO     | sum of square deviations: 2632440055.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,428 | INFO     | sum of deviations: -16844966329.0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,428 | INFO     | mean x: 1765970575.5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,428 | INFO     | mean y: 2492131.068627451
[2025-12-17 14:15:24] 2025-12-17 13:14:37,429 | INFO     | intersect: 11302926048.186733
[2025-12-17 14:15:24] 2025-12-17 13:14:37,429 | INFO     | chi2: 0.13368120247266135
[2025-12-17 14:15:24] 2025-12-17 13:14:37,429 | INFO     | current memory leak: -6.40 B/s (using 204 data points, chi2=0.13)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | ..............................
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . Timing measurements:
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . get job = 0 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . initial setup = 9 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . payload setup = 132 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . stage-in = 0 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . payload execution = 14165 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . stage-out = 4 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,430 | INFO     | . log creation = 1 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,431 | INFO     | ..............................
[2025-12-17 14:15:24] 2025-12-17 13:14:37,462 | INFO     | time since job start (14567s) is within the limit (174528.0s)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | 
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | job summary report
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | --------------------------------------------------
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | PanDA job id: 6931596491
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | task id: 47886831
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | errors: (none)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | pilot state: finished 
[2025-12-17 14:15:24] 2025-12-17 13:14:37,562 | INFO     | transexitcode: 0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | exeerrorcode: 0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | exeerrordiag: 
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | exitcode: 0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | exitmsg: OK
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | cpuconsumptiontime: 53560 s
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | nevents: 400
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | neventsw: 0
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | pid: 9178
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | pgrp: 9178
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | corecount: 8
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | event service: False
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | sizes: {0: 2283823, 1: 2284022, 12: 2284022, 22: 2284050, 33: 2284078, 44: 2284134, 54: 2284290, 65: 2284318, 76: 2284346, 83: 2284664, 87: 2284720, 14302: 2315011
[2025-12-17 14:15:24] 2025-12-17 13:14:37,563 | INFO     | --------------------------------------------------
[2025-12-17 14:15:24] 2025-12-17 13:14:37,564 | INFO     | 
[2025-12-17 14:15:24] 2025-12-17 13:14:37,564 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-17 14:15:24] 2025-12-17 13:14:37,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 14:15:24] 2025-12-17 13:14:37,677 | INFO     | job 6931596491 has completed (purged errors)
[2025-12-17 14:15:24] 2025-12-17 13:14:37,677 | INFO     | overall cleanup function is called
[2025-12-17 14:15:24] 2025-12-17 13:14:38,688 | INFO     | --- collectZombieJob: --- 10, [9178]
[2025-12-17 14:15:24] 2025-12-17 13:14:38,688 | INFO     | zombie collector waiting for pid 9178
[2025-12-17 14:15:24] 2025-12-17 13:14:38,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 14:15:24] 2025-12-17 13:14:38,689 | INFO     | collected zombie processes
[2025-12-17 14:15:24] 2025-12-17 13:14:38,689 | INFO     | will attempt to kill all subprocesses of pid=9178
[2025-12-17 14:15:24] 2025-12-17 13:14:38,811 | INFO     | process IDs to be killed: [9178] (in reverse order)
[2025-12-17 14:15:24] 2025-12-17 13:14:39,435 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 14:15:24] 2025-12-17 13:14:39,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 14:15:24] 2025-12-17 13:14:39,438 | INFO     | did not find any defunct processes belonging to 9178
[2025-12-17 14:15:24] 2025-12-17 13:14:39,441 | INFO     | did not find any defunct processes belonging to 9178
[2025-12-17 14:15:24] 2025-12-17 13:14:39,441 | INFO     | ready for new job
[2025-12-17 14:15:24] 2025-12-17 13:14:39,441 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 14:15:24] 2025-12-17 13:14:39,443 | INFO     | ***************************************
[2025-12-17 14:15:24] 2025-12-17 13:14:39,443 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 14:15:24] 2025-12-17 13:14:39,443 | INFO     | ***************************************
[2025-12-17 14:15:24] 2025-12-17 13:14:39,443 | INFO     | 
[2025-12-17 14:15:24] 2025-12-17 13:14:39,444 | INFO     | pilot is running in a VM
[2025-12-17 14:15:24] 2025-12-17 13:14:39,444 | INFO     | architecture information:
[2025-12-17 14:15:24] 2025-12-17 13:14:39,453 | INFO     | executing command: cat /etc/os-release
[2025-12-17 14:15:24] 2025-12-17 13:14:39,642 | INFO     | cat /etc/os-release:
[2025-12-17 14:15:24] NAME="CentOS Linux"
[2025-12-17 14:15:24] VERSION="7 (Core)"
[2025-12-17 14:15:24] ID="centos"
[2025-12-17 14:15:24] ID_LIKE="rhel fedora"
[2025-12-17 14:15:24] VERSION_ID="7"
[2025-12-17 14:15:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 14:15:24] ANSI_COLOR="0;31"
[2025-12-17 14:15:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 14:15:24] HOME_URL="https://www.centos.org/"
[2025-12-17 14:15:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 14:15:24] 
[2025-12-17 14:15:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 14:15:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 14:15:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 14:15:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 14:15:24] 
[2025-12-17 14:15:24] 2025-12-17 13:14:39,642 | INFO     | ***************************************
[2025-12-17 14:15:24] 2025-12-17 13:14:40,145 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-17 14:15:24] 2025-12-17 13:14:40,411 | INFO     | sufficient remaining disk space (495994273792 B)
[2025-12-17 14:15:24] 2025-12-17 13:14:40,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 14:15:24] 2025-12-17 13:14:40,412 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 14:15:24] 2025-12-17 13:14:40,412 | INFO     | update_server=False
[2025-12-17 14:15:24] 2025-12-17 13:14:40,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 14:15:24] 2025-12-17 13:14:40,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 14:15:24] 2025-12-17 13:14:40,591 | INFO     | all job control threads have been joined
[2025-12-17 14:15:24] 2025-12-17 13:14:40,642 | INFO     | all data control threads have been joined
[2025-12-17 14:15:24] 2025-12-17 13:14:40,657 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 14:15:24] 2025-12-17 13:14:40,657 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 14:15:24] 2025-12-17 13:14:40,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:15:24] 2025-12-17 13:14:40,658 | INFO     | will abort loop
[2025-12-17 14:15:24] 2025-12-17 13:14:40,761 | INFO     | all payload control threads have been joined
[2025-12-17 14:15:24] 2025-12-17 13:14:41,418 | INFO     | [job] retrieve thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,468 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,597 | INFO     | [job] control thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,648 | INFO     | [data] control thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,663 | INFO     | [job] job monitor thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,699 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,767 | INFO     | [payload] control thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:41,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,410 | INFO     | [job] validate thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,419 | INFO     | [data] copytool_out thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 14:15:24] 2025-12-17 13:14:42,495 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 14:15:24] 2025-12-17 13:14:42,639 | INFO     | [payload] validate_post thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,675 | INFO     | [data] copytool_in thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:42,889 | INFO     | [payload] failed_post thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:43,584 | INFO     | [job] queue monitor thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:14:46,492 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 14:15:24] 2025-12-17 13:15:10,668 | INFO     | PID=2535 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-17 14:15:24] 2025-12-17 13:15:10,669 | INFO     | .. there are 9 such processes running
[2025-12-17 14:15:24] 2025-12-17 13:15:10,669 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 14:15:24] 2025-12-17 13:15:10,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 14:15:24] 2025-12-17 13:15:10,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 14:15:24] 2025-12-17 13:15:14,393 | INFO     | [monitor] cgroup control has ended
[2025-12-17 14:15:24] 2025-12-17 13:15:15,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524047820608)>', '<ExcThread(monitor, started 140523469793024)>']
[2025-12-17 14:15:24] 2025-12-17 13:15:15,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 14:15:24] 2025-12-17 13:15:15,698 | INFO     | [monitor] control thread has ended
[2025-12-17 14:15:24] 2025-12-17 13:15:20,471 | INFO     | all workflow threads have been joined
[2025-12-17 14:15:24] 2025-12-17 13:15:20,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 14:15:24] 2025-12-17 13:15:20,472 | INFO     | traces error code: 0
[2025-12-17 14:15:24] 2025-12-17 13:15:20,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 14:15:24] 2025-12-17 13:15:20,959 [wrapper] ==== pilot stdout END ====
[2025-12-17 14:15:24] 2025-12-17 13:15:21,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 14:15:24] 2025-12-17 13:15:21,118 [wrapper] pilotpid: 2535
[2025-12-17 14:15:24] 2025-12-17 13:15:21,218 [wrapper] Pilot exit status: 0
[2025-12-17 14:15:24] 2025-12-17 13:15:21,688 [wrapper] pandaids: 6931596491
[2025-12-17 14:15:24] 2025-12-17 13:15:21,968 [wrapper] cleanup supervisor_pilot 19467 2536
[2025-12-17 14:15:24] 2025-12-17 13:15:22,010 [wrapper] Test setup, not cleaning
[2025-12-17 14:15:24] 2025-12-17 13:15:22,057 [wrapper] apfmon messages muted
[2025-12-17 14:15:24] 2025-12-17 13:15:22,069 [wrapper] ==== wrapper stdout END ====
[2025-12-17 14:15:24] 2025-12-17 13:15:22,119 [wrapper] ==== wrapper stderr END ====
[2025-12-17 14:15:24]  *** Error codes and diagnostics ***
[2025-12-17 14:15:24]     "exeErrorCode": 0,
[2025-12-17 14:15:24]     "exeErrorDiag": "",
[2025-12-17 14:15:24]     "pilotErrorCode": 0,
[2025-12-17 14:15:24]     "pilotErrorDiag": "",
[2025-12-17 14:15:24]  *** Listing of results directory ***
[2025-12-17 14:15:24] total 336332
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc      5112 Dec 16 18:35 queuedata.json
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc    579449 Dec 16 18:35 pilot3.tar.gz
[2025-12-17 14:15:24] -rwx------. 1 boinc boinc     36322 Dec 16 18:35 runpilot2-wrapper.sh
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc       100 Dec 17 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 14:15:24] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 10:07 run_atlas
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc       105 Dec 17 10:07 job.xml
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc      6392 Dec 17 10:07 init_data.xml
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc 192200255 Dec 17 10:07 EVNT.47886829._000497.pool.root.1
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 10:07 start_atlas.sh
[2025-12-17 14:15:24] drwxrwx--x. 2 boinc boinc        68 Dec 17 10:07 shared
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc    592411 Dec 17 10:07 input.tar.gz
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc         0 Dec 17 10:07 boinc_lockfile
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc      2540 Dec 17 10:07 pandaJob.out
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc    987417 Dec 17 10:11 agis_schedconf.cvmfs.json
[2025-12-17 14:15:24] drwx------. 5 boinc boinc      4096 Dec 17 10:11 pilot3
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc 143509200 Dec 17 14:11 HITS.47886831._014076.pool.root.1
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc       531 Dec 17 14:12 boinc_task_state.xml
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc      1017 Dec 17 14:12 memory_monitor_summary.json
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc   1516240 Dec 17 14:13 agis_ddmendpoints.agis.ALL.json
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc    456311 Dec 17 14:13 log.47886831._014076.job.log.tgz.1
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc        95 Dec 17 14:14 pilot_heartbeat.json
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc      7776 Dec 17 14:14 heartbeat.json
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc      8192 Dec 17 14:14 boinc_mmap_file
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc        28 Dec 17 14:15 wrapper_checkpoint.txt
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc      5069 Dec 17 14:15 pilotlog.txt
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc   1944184 Dec 17 14:15 log.47886831._014076.job.log.1
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc       357 Dec 17 14:15 output.list
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc       620 Dec 17 14:15 runtime_log
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc   2416640 Dec 17 14:15 result.tar.gz
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc      8817 Dec 17 14:15 runtime_log.err
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc       657 Dec 17 14:15 LMLNDmk8np8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHMaKDmmGcDpm.diag
[2025-12-17 14:15:24] -rw-r--r--. 1 boinc boinc     21026 Dec 17 14:15 stderr.txt
[2025-12-17 14:15:24] HITS file was successfully produced:
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc 143509200 Dec 17 14:11 shared/HITS.pool.root.1
[2025-12-17 14:15:24]  *** Contents of shared directory: ***
[2025-12-17 14:15:24] total 330800
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc 192200255 Dec 17 10:07 ATLAS.root_0
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 10:07 start_atlas.sh
[2025-12-17 14:15:24] -rw-r--r--. 2 boinc boinc    592411 Dec 17 10:07 input.tar.gz
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc 143509200 Dec 17 14:11 HITS.pool.root.1
[2025-12-17 14:15:24] -rw-------. 1 boinc boinc   2416640 Dec 17 14:15 result.tar.gz
14:15:26 (31155): run_atlas exited; CPU time 53754.678873
14:15:26 (31155): called boinc_finish(0)

</stderr_txt>
]]>

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