Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:05:18 (824654): wrapper (7.7.26015): starting
12:05:18 (824654): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 12:05:18] Arguments: --nthreads 3
[2025-12-17 12:05:18] Threads: 3
[2025-12-17 12:05:18] Checking for CVMFS
[2025-12-17 12:05:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 12:05:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 12:05:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 12:05:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 12:05:18] 2.9.2.0 3564296 5770 88696 154109 1 57 31158692 36864000 0 130560 0 3846289 99.989 214701 7307 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 12:05:18] CVMFS is ok
[2025-12-17 12:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 12:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 12:05:18] Further information can be found at the LHC@home message board.
[2025-12-17 12:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 12:05:18] Checking for apptainer binary...
[2025-12-17 12:05:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 12:05:18] Running /usr/bin/apptainer --version
[2025-12-17 12:05:18] apptainer version 1.4.1-1.1
[2025-12-17 12:05:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 12:05:18] thA371b
[2025-12-17 12:05:18] apptainer works
[2025-12-17 12:05:18] Set ATHENA_PROC_NUMBER=3
[2025-12-17 12:05:18] Set ATHENA_CORE_NUMBER=3
[2025-12-17 12:05:18] Starting ATLAS job with PandaID=6931597369
[2025-12-17 12:05:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:33:36]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:33:36] VERSION_ID="7"
[2025-12-17 13:33:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 13:33:36] ANSI_COLOR="0;31"
[2025-12-17 13:33:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 13:33:36] HOME_URL="https://www.centos.org/"
[2025-12-17 13:33:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 13:33:36] 
[2025-12-17 13:33:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 13:33:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 13:33:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 13:33:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 13:33:36] 
[2025-12-17 13:33:36] 2025-12-17 12:32:31,232 | INFO     | ***************************************
[2025-12-17 13:33:36] 2025-12-17 12:32:31,735 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | INFO     | sufficient remaining disk space (228756291584 B)
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | INFO     | update_server=False
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | INFO     | aborting loop
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:33:36] 2025-12-17 12:32:31,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:33:36] 2025-12-17 12:32:32,352 | INFO     | all payload control threads have been joined
[2025-12-17 13:33:36] 2025-12-17 12:32:32,516 | INFO     | all data control threads have been joined
[2025-12-17 13:33:36] 2025-12-17 12:32:32,753 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:32,753 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:32,753 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:32,798 | INFO     | all job control threads have been joined
[2025-12-17 13:33:36] 2025-12-17 12:32:32,964 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,358 | INFO     | [payload] control thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,390 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,494 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,522 | INFO     | [data] control thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,602 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,754 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,803 | INFO     | [job] control thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,895 | INFO     | [job] validate thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:33,988 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:34,024 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:35,754 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:32:42,377 | INFO     | job.realtimelogging is not enabled
[2025-12-17 13:33:36] 2025-12-17 12:32:43,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:33:36] 2025-12-17 12:33:02,740 | INFO     | PID=828377 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 13:33:36] 2025-12-17 12:33:02,740 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:33:36] 2025-12-17 12:33:02,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:33:36] 2025-12-17 12:33:02,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:33:36] 2025-12-17 12:33:29,945 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:33:36] 2025-12-17 12:33:31,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165346572096)>', '<ExcThread(monitor, started 140164546410240)>']
[2025-12-17 13:33:36] 2025-12-17 12:33:31,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:33:36] 2025-12-17 12:33:31,887 | INFO     | [monitor] control thread has ended
[2025-12-17 13:33:36] 2025-12-17 12:33:36,039 | INFO     | all workflow threads have been joined
[2025-12-17 13:33:36] 2025-12-17 12:33:36,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:33:36] 2025-12-17 12:33:36,039 | INFO     | traces error code: 0
[2025-12-17 13:33:36] 2025-12-17 12:33:36,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:33:36] 2025-12-17 12:33:36,087 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:33:36] 2025-12-17 12:33:36,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:33:36] 2025-12-17 12:33:36,092 [wrapper] pilotpid: 828377
[2025-12-17 13:33:36] 2025-12-17 12:33:36,094 [wrapper] Pilot exit status: 0
[2025-12-17 13:33:36] 2025-12-17 12:33:36,101 [wrapper] pandaids: 6931597369
[2025-12-17 13:33:36] 2025-12-17 12:33:36,118 [wrapper] cleanup supervisor_pilot  846865 828378
[2025-12-17 13:33:36] 2025-12-17 12:33:36,120 [wrapper] Test setup, not cleaning
[2025-12-17 13:33:36] 2025-12-17 12:33:36,122 [wrapper] apfmon messages muted
[2025-12-17 13:33:36] 2025-12-17 12:33:36,125 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:33:36] 2025-12-17 12:33:36,127 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:33:36]  *** Error codes and diagnostics ***
[2025-12-17 13:33:36]     "exeErrorCode": 0,
[2025-12-17 13:33:36]     "exeErrorDiag": "",
[2025-12-17 13:33:36]     "pilotErrorCode": 0,
[2025-12-17 13:33:36]     "pilotErrorDiag": "",
[2025-12-17 13:33:36]  *** Listing of results directory ***
[2025-12-17 13:33:36] total 342740
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      5112 Dec 16 18:35 queuedata.json
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc    579449 Dec 16 18:35 pilot3.tar.gz
[2025-12-17 13:33:36] -rwx------ 1 boinc boinc     36322 Dec 16 18:35 runpilot2-wrapper.sh
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc       100 Dec 17 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:33:36] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 12:05 run_atlas
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc       105 Dec 17 12:05 job.xml
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc 193348479 Dec 17 12:05 EVNT.47886829._000501.pool.root.1
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc    592416 Dec 17 12:05 input.tar.gz
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc     15847 Dec 17 12:05 start_atlas.sh
[2025-12-17 13:33:36] drwxrwx--x 2 boinc boinc      4096 Dec 17 12:05 shared
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc         0 Dec 17 12:05 boinc_setup_complete
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      6440 Dec 17 12:05 init_data.xml
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc         0 Dec 17 12:05 boinc_lockfile
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      2539 Dec 17 12:05 pandaJob.out
[2025-12-17 13:33:36] -rw------- 1 boinc boinc    987423 Dec 17 12:05 agis_schedconf.cvmfs.json
[2025-12-17 13:33:36] -rw------- 1 boinc boinc   1516240 Dec 17 12:05 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:33:36] drwx------ 5 boinc boinc      4096 Dec 17 12:05 pilot3
[2025-12-17 13:33:36] -rw------- 1 boinc boinc 151641789 Dec 17 13:32 HITS.47886831._014188.pool.root.1
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc       529 Dec 17 13:32 boinc_task_state.xml
[2025-12-17 13:33:36] -rw------- 1 boinc boinc      1014 Dec 17 13:32 memory_monitor_summary.json
[2025-12-17 13:33:36] -rw------- 1 boinc boinc    272201 Dec 17 13:32 log.47886831._014188.job.log.tgz.1
[2025-12-17 13:33:36] -rw------- 1 boinc boinc      7753 Dec 17 13:32 heartbeat.json
[2025-12-17 13:33:36] -rw------- 1 boinc boinc        95 Dec 17 13:33 pilot_heartbeat.json
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      8192 Dec 17 13:33 boinc_mmap_file
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc        27 Dec 17 13:33 wrapper_checkpoint.txt
[2025-12-17 13:33:36] -rw------- 1 boinc boinc      4823 Dec 17 13:33 pilotlog.txt
[2025-12-17 13:33:36] -rw------- 1 boinc boinc    763731 Dec 17 13:33 log.47886831._014188.job.log.1
[2025-12-17 13:33:36] -rw------- 1 boinc boinc       357 Dec 17 13:33 output.list
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc       620 Dec 17 13:33 runtime_log
[2025-12-17 13:33:36] -rw------- 1 boinc boinc   1054720 Dec 17 13:33 result.tar.gz
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      8902 Dec 17 13:33 runtime_log.err
[2025-12-17 13:33:36] -rw------- 1 boinc boinc       659 Dec 17 13:33 GjcKDms8np8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCsVKDmlZkRPo.diag
[2025-12-17 13:33:36] -rw-r--r-- 1 boinc boinc      8637 Dec 17 13:33 stderr.txt
[2025-12-17 13:33:36] HITS file was successfully produced:
[2025-12-17 13:33:36] -rw------- 1 boinc boinc 151641789 Dec 17 13:32 shared/HITS.pool.root.1
[2025-12-17 13:33:36]  *** Contents of shared directory: ***
[2025-12-17 13:33:36] total 338544
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc 193348479 Dec 17 12:05 ATLAS.root_0
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc    592416 Dec 17 12:05 input.tar.gz
[2025-12-17 13:33:36] -rw-r--r-- 2 boinc boinc     15847 Dec 17 12:05 start_atlas.sh
[2025-12-17 13:33:36] -rw------- 1 boinc boinc 151641789 Dec 17 13:32 HITS.pool.root.1
[2025-12-17 13:33:36] -rw------- 1 boinc boinc   1054720 Dec 17 13:33 result.tar.gz
13:33:37 (824654): run_atlas exited; CPU time 15031.171457
13:33:37 (824654): called boinc_finish(0)

</stderr_txt>
]]>

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