Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:59 (347999): wrapper (7.7.26015): starting
18:42:59 (347999): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 18:42:59] Arguments: --nthreads 12
[2025-12-16 18:42:59] Threads: 12
[2025-12-16 18:42:59] Checking for CVMFS
[2025-12-16 18:42:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 18:42:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 18:42:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 18:42:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 18:42:59] 2.11.5.0 606937 22861 369076 154095 3 517 25955987 45568000 13870 130560 0 159979723 99.751 121688172 21063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 18:42:59] CVMFS is ok
[2025-12-16 18:42:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 18:42:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 18:42:59] Further information can be found at the LHC@home message board.
[2025-12-16 18:42:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 18:42:59] Checking for apptainer binary...
[2025-12-16 18:42:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 18:42:59] Running /usr/bin/apptainer --version
[2025-12-16 18:42:59] apptainer version 1.4.1-1.el9
[2025-12-16 18:42:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 18:43:10] wns0067.triumf.lcg
[2025-12-16 18:43:10] apptainer works
[2025-12-16 18:43:10] Set ATHENA_PROC_NUMBER=12
[2025-12-16 18:43:10] Set ATHENA_CORE_NUMBER=12
[2025-12-16 18:43:10] Starting ATLAS job with PandaID=6931441423
[2025-12-16 18:43:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 18:47:37]  *** The last 200 lines of the pilot log: ***
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | wrong length of table data, x=[1765939458.0], y=[850.0] (must be same and length>=4)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . Timing measurements:
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . get job = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . initial setup = 4 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload setup = 9 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-in = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload execution = 31 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-out = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . log creation = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931441423/pilotlog.txt
[2025-12-16 18:47:37] 2025-12-17 02:46:46,908 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 18:47:37] - Log from pilotlog.txt -
[2025-12-16 18:47:37] 2025-12-17 02:46:46,893 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931441423/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | INFO     | extracted standard info from prmon json
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | wrong length of table data, x=[1765939458.0], y=[850.0] (must be same and length>=4)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . Timing measurements:
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . get job = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . initial setup = 4 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload setup = 9 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-in = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload execution = 31 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-out = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . log creation = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931441423/pilotlog.txt
[2025-12-16 18:47:37] 2025-12-17 02:46:46,908 | WARNING  | 
[2025-12-16 18:47:37] [begin log extracts]
[2025-12-16 18:47:37] - Log from pilotlog.txt -
[2025-12-16 18:47:37] 2025-12-17 02:46:46,893 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931441423/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | INFO     | extracted standard info from prmon json
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 18:47:37] 2025-12-17 02:46:46,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | WARNING  | wrong length of table data, x=[1765939458.0], y=[850.0] (must be same and length>=4)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,895 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . Timing measurements:
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . get job = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . initial setup = 4 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload setup = 9 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-in = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . payload execution = 31 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . stage-out = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | . log creation = 0 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | ..............................
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 18:47:37] 2025-12-17 02:46:46,896 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931441423/pilotlog.txt
[2025-12-16 18:47:37] [end log extracts]
[2025-12-16 18:47:37] 2025-12-17 02:46:46,908 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,909 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 18:47:37] 2025-12-17 02:46:46,967 | INFO     | 
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | job summary report
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | --------------------------------------------------
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | PanDA job id: 6931441423
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | task id: 47905873
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 18:44:32,903 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | pilot state: failed 
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | transexitcode: 65
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | exeerrorcode: 65
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | exitcode: 65
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | cpuconsumptiontime: 16 s
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | nevents: 0
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | neventsw: 0
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | pid: 358331
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | pgrp: 358331
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | corecount: 12
[2025-12-16 18:47:37] 2025-12-17 02:46:46,968 | INFO     | event service: False
[2025-12-16 18:47:37] 2025-12-17 02:46:46,969 | INFO     | sizes: {0: 2283022, 1: 2283875, 2: 2283875, 8: 2284165, 13: 2284193, 45: 2307509, 47: 2311857, 171: 2312055}
[2025-12-16 18:47:37] 2025-12-17 02:46:46,969 | INFO     | --------------------------------------------------
[2025-12-16 18:47:37] 2025-12-17 02:46:46,969 | INFO     | 
[2025-12-16 18:47:37] 2025-12-17 02:46:46,969 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 18:47:37] 2025-12-17 02:46:47,028 | INFO     | time since job start (195s) is within the limit (174528.0s)
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | job 6931441423 has completed (purged errors)
[2025-12-16 18:47:37] 2025-12-17 02:46:47,127 | INFO     | overall cleanup function is called
[2025-12-16 18:47:37] 2025-12-17 02:46:48,133 | INFO     | --- collectZombieJob: --- 10, [358331]
[2025-12-16 18:47:37] 2025-12-17 02:46:48,134 | INFO     | zombie collector waiting for pid 358331
[2025-12-16 18:47:37] 2025-12-17 02:46:48,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 18:47:37] 2025-12-17 02:46:48,134 | INFO     | collected zombie processes
[2025-12-16 18:47:37] 2025-12-17 02:46:48,134 | INFO     | will attempt to kill all subprocesses of pid=358331
[2025-12-16 18:47:37] 2025-12-17 02:46:48,539 | INFO     | process IDs to be killed: [358331] (in reverse order)
[2025-12-16 18:47:37] 2025-12-17 02:46:48,606 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 18:47:37] 2025-12-17 02:46:48,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 18:47:37] 2025-12-17 02:46:48,614 | INFO     | did not find any defunct processes belonging to 358331
[2025-12-16 18:47:37] 2025-12-17 02:46:48,621 | INFO     | did not find any defunct processes belonging to 358331
[2025-12-16 18:47:37] 2025-12-17 02:46:48,621 | INFO     | ready for new job
[2025-12-16 18:47:37] 2025-12-17 02:46:48,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 18:47:37] 2025-12-17 02:46:48,623 | INFO     | ***************************************
[2025-12-16 18:47:37] 2025-12-17 02:46:48,623 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 18:47:37] 2025-12-17 02:46:48,623 | INFO     | ***************************************
[2025-12-16 18:47:37] 2025-12-17 02:46:48,623 | INFO     | 
[2025-12-16 18:47:37] 2025-12-17 02:46:48,625 | INFO     | architecture information:
[2025-12-16 18:47:37] 2025-12-17 02:46:48,625 | INFO     | executing command: cat /etc/os-release
[2025-12-16 18:47:37] 2025-12-17 02:46:48,643 | INFO     | cat /etc/os-release:
[2025-12-16 18:47:37] NAME="CentOS Linux"
[2025-12-16 18:47:37] VERSION="7 (Core)"
[2025-12-16 18:47:37] ID="centos"
[2025-12-16 18:47:37] ID_LIKE="rhel fedora"
[2025-12-16 18:47:37] VERSION_ID="7"
[2025-12-16 18:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 18:47:37] ANSI_COLOR="0;31"
[2025-12-16 18:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 18:47:37] HOME_URL="https://www.centos.org/"
[2025-12-16 18:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 18:47:37] 
[2025-12-16 18:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 18:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 18:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 18:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 18:47:37] 
[2025-12-16 18:47:37] 2025-12-17 02:46:48,643 | INFO     | ***************************************
[2025-12-16 18:47:37] 2025-12-17 02:46:49,148 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 18:47:37] 2025-12-17 02:46:49,196 | INFO     | sufficient remaining disk space (2035553402880 B)
[2025-12-16 18:47:37] 2025-12-17 02:46:49,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 18:47:37] 2025-12-17 02:46:49,197 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 18:47:37] 2025-12-17 02:46:49,197 | INFO     | update_server=False
[2025-12-16 18:47:37] 2025-12-17 02:46:49,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 18:47:37] 2025-12-17 02:46:49,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 18:47:37] 2025-12-17 02:46:49,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:47:37] 2025-12-17 02:46:49,202 | INFO     | aborting loop
[2025-12-16 18:47:37] 2025-12-17 02:46:49,582 | INFO     | all job control threads have been joined
[2025-12-16 18:47:37] 2025-12-17 02:46:50,126 | INFO     | all data control threads have been joined
[2025-12-16 18:47:37] 2025-12-17 02:46:50,203 | INFO     | [job] retrieve thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,207 | INFO     | [job] job monitor thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,336 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,453 | INFO     | [data] copytool_in thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,586 | INFO     | all payload control threads have been joined
[2025-12-16 18:47:37] 2025-12-17 02:46:50,588 | INFO     | [job] control thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 18:47:37] 2025-12-17 02:46:50,779 | INFO     | [payload] failed_post thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:50,888 | INFO     | [payload] validate_post thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,132 | INFO     | [data] control thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,207 | INFO     | [data] copytool_out thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,471 | INFO     | [job] validate thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,561 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,591 | INFO     | [payload] control thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,613 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:51,980 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 18:47:37] 2025-12-17 02:46:52,986 | INFO     | [job] queue monitor thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:46:54,603 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 18:47:37] 2025-12-17 02:47:20,735 | INFO     | PID=351739 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 18:47:37] 2025-12-17 02:47:20,736 | INFO     | .. there are 28 such processes running
[2025-12-16 18:47:37] 2025-12-17 02:47:20,736 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 18:47:37] 2025-12-17 02:47:20,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 18:47:37] 2025-12-17 02:47:20,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 18:47:37] 2025-12-17 02:47:32,219 | INFO     | [monitor] cgroup control has ended
[2025-12-16 18:47:37] 2025-12-17 02:47:32,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689022371648)>', '<ExcThread(monitor, started 140688473704192)>']
[2025-12-16 18:47:37] 2025-12-17 02:47:32,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 18:47:37] 2025-12-17 02:47:32,809 | INFO     | [monitor] control thread has ended
[2025-12-16 18:47:37] 2025-12-17 02:47:37,447 | INFO     | all workflow threads have been joined
[2025-12-16 18:47:37] 2025-12-17 02:47:37,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 18:47:37] 2025-12-17 02:47:37,448 | INFO     | traces error code: 0
[2025-12-16 18:47:37] 2025-12-17 02:47:37,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 18:47:37] 2025-12-17 02:47:37,746 [wrapper] ==== pilot stdout END ====
[2025-12-16 18:47:37] 2025-12-17 02:47:37,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 18:47:37] 2025-12-17 02:47:37,749 [wrapper] pilotpid: 351739
[2025-12-16 18:47:37] 2025-12-17 02:47:37,751 [wrapper] Pilot exit status: 0
[2025-12-16 18:47:37] 2025-12-17 02:47:37,759 [wrapper] pandaids: 6931441423
[2025-12-16 18:47:37] 2025-12-17 02:47:37,801 [wrapper] cleanup supervisor_pilot  351745 351740
[2025-12-16 18:47:37] 2025-12-17 02:47:37,803 [wrapper] Test setup, not cleaning
[2025-12-16 18:47:37] 2025-12-17 02:47:37,805 [wrapper] apfmon messages muted
[2025-12-16 18:47:37] 2025-12-17 02:47:37,806 [wrapper] ==== wrapper stdout END ====
[2025-12-16 18:47:37] 2025-12-17 02:47:37,808 [wrapper] ==== wrapper stderr END ====
[2025-12-16 18:47:37]  *** Error codes and diagnostics ***
[2025-12-16 18:47:37]     "exeErrorCode": 65,
[2025-12-16 18:47:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 18:47:37]     "pilotErrorCode": 1305,
[2025-12-16 18:47:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 18:47:37]  *** Listing of results directory ***
[2025-12-16 18:47:37] total 203824
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc    579449 Dec 16 07:02 pilot3.tar.gz
[2025-12-16 18:47:37] -rwx------. 1 boinc boinc     36322 Dec 16 07:03 runpilot2-wrapper.sh
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc      5112 Dec 16 07:04 queuedata.json
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc       100 Dec 16 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 18:47:37] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 18:42 run_atlas
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc       105 Dec 16 18:42 job.xml
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc 204589896 Dec 16 18:42 EVNT.47905871._000027.pool.root.1
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc      6596 Dec 16 18:42 init_data.xml
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc     15847 Dec 16 18:42 start_atlas.sh
[2025-12-16 18:47:37] drwxrwx--x. 2 boinc boinc      4096 Dec 16 18:42 shared
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc    592376 Dec 16 18:42 input.tar.gz
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc         0 Dec 16 18:42 boinc_lockfile
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc      2467 Dec 16 18:43 pandaJob.out
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc    987409 Dec 16 18:43 agis_schedconf.cvmfs.json
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc   1516240 Dec 16 18:43 agis_ddmendpoints.agis.ALL.json
[2025-12-16 18:47:37] drwx------. 5 boinc boinc      4096 Dec 16 18:43 pilot3
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc       522 Dec 16 18:44 boinc_task_state.xml
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc       948 Dec 16 18:44 memory_monitor_summary.json
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc     20993 Dec 16 18:44 log.47905873._000654.job.log.tgz.1
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc        95 Dec 16 18:46 pilot_heartbeat.json
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc      8379 Dec 16 18:46 heartbeat.json
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc      8192 Dec 16 18:47 boinc_mmap_file
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc      4822 Dec 16 18:47 pilotlog.txt
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc        22 Dec 16 18:47 wrapper_checkpoint.txt
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc     86325 Dec 16 18:47 log.47905873._000654.job.log.1
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc       188 Dec 16 18:47 output.list
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc       620 Dec 16 18:47 runtime_log
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc    122880 Dec 16 18:47 result.tar.gz
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc       644 Dec 16 18:47 WHeKDm5klp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQnVKDmPERPzn.diag
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc      8636 Dec 16 18:47 runtime_log.err
[2025-12-16 18:47:37] -rw-r--r--. 1 boinc boinc     21793 Dec 16 18:47 stderr.txt
[2025-12-16 18:47:37] No HITS result produced
[2025-12-16 18:47:37]  *** Contents of shared directory: ***
[2025-12-16 18:47:37] total 200516
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc 204589896 Dec 16 18:42 ATLAS.root_0
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc     15847 Dec 16 18:42 start_atlas.sh
[2025-12-16 18:47:37] -rw-r--r--. 2 boinc boinc    592376 Dec 16 18:42 input.tar.gz
[2025-12-16 18:47:37] -rw-------. 1 boinc boinc    122880 Dec 16 18:47 result.tar.gz
18:47:39 (347999): run_atlas exited; CPU time 23.874518
18:47:39 (347999): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN