Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:58:30 (1542524): wrapper (7.7.26015): starting
11:58:30 (1542524): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 11:58:30] Arguments: --nthreads 3
[2025-12-17 11:58:30] Threads: 3
[2025-12-17 11:58:30] Checking for CVMFS
[2025-12-17 11:58:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 11:58:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 11:58:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 11:58:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 11:58:31] 2.9.2.0 19183 6110 69960 154109 3 57 32124533 36864000 0 130560 0 4018030 99.989 228385 7405 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 11:58:31] CVMFS is ok
[2025-12-17 11:58:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 11:58:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 11:58:31] Further information can be found at the LHC@home message board.
[2025-12-17 11:58:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 11:58:31] Checking for apptainer binary...
[2025-12-17 11:58:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 11:58:31] Running /usr/bin/apptainer --version
[2025-12-17 11:58:31] apptainer version 1.4.1-1.1
[2025-12-17 11:58:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 11:58:31] magicA244b
[2025-12-17 11:58:31] apptainer works
[2025-12-17 11:58:31] Set ATHENA_PROC_NUMBER=3
[2025-12-17 11:58:31] Set ATHENA_CORE_NUMBER=3
[2025-12-17 11:58:31] Starting ATLAS job with PandaID=6930761646
[2025-12-17 11:58:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 13:34:07]  *** The last 200 lines of the pilot log: ***
[2025-12-17 13:34:07] 2025-12-17 12:33:37,550 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 13:34:07] 2025-12-17 12:33:37,550 | INFO     | update_server=False
[2025-12-17 13:34:07] 2025-12-17 12:33:37,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 13:34:07] 2025-12-17 12:33:37,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 13:34:07] 2025-12-17 12:33:37,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:34:07] 2025-12-17 12:33:37,758 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 13:34:07] 2025-12-17 12:33:37,759 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 13:34:07] 2025-12-17 12:33:37,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 13:34:07] 2025-12-17 12:33:37,759 | INFO     | will abort loop
[2025-12-17 13:34:07] 2025-12-17 12:33:37,777 | INFO     | all data control threads have been joined
[2025-12-17 13:34:07] 2025-12-17 12:33:38,556 | INFO     | [job] retrieve thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,557 | INFO     | [job] queue monitor thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,595 | INFO     | [payload] validate_post thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,610 | INFO     | [data] copytool_in thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,672 | INFO     | [payload] failed_post thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,763 | INFO     | [job] job monitor thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,783 | INFO     | [data] control thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:38,884 | INFO     | all job control threads have been joined
[2025-12-17 13:34:07] 2025-12-17 12:33:39,023 | INFO     | all payload control threads have been joined
[2025-12-17 13:34:07] 2025-12-17 12:33:39,367 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:39,462 | INFO     | [job] validate thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:39,516 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:39,530 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:39,557 | INFO     | [data] copytool_out thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:39,890 | INFO     | [job] control thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:40,029 | INFO     | [payload] control thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:40,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 13:34:07] 2025-12-17 12:33:44,255 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:48,368 | INFO     | job.realtimelogging is not enabled
[2025-12-17 13:34:07] 2025-12-17 12:33:49,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 13:34:07] 2025-12-17 12:33:49,633 | INFO     | [monitor] cgroup control has ended
[2025-12-17 13:34:07] 2025-12-17 12:33:51,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262318057280)>', '<ExcThread(monitor, started 140261686507264)>']
[2025-12-17 13:34:07] 2025-12-17 12:33:56,156 | INFO     | all workflow threads have been joined
[2025-12-17 13:34:07] 2025-12-17 12:33:56,156 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 13:34:07] 2025-12-17 12:33:56,157 | INFO     | traces error code: 0
[2025-12-17 13:34:07] 2025-12-17 12:33:56,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | INFO     | PID=1546258 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 13:34:07] 2025-12-17 12:34:07,631 | INFO     | [monitor] control thread has ended
[2025-12-17 13:34:07] 2025-12-17 12:34:07,674 [wrapper] ==== pilot stdout END ====
[2025-12-17 13:34:07] 2025-12-17 12:34:07,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 13:34:07] 2025-12-17 12:34:07,680 [wrapper] pilotpid: 1546258
[2025-12-17 13:34:07] 2025-12-17 12:34:07,683 [wrapper] Pilot exit status: 0
[2025-12-17 13:34:07] 2025-12-17 12:34:07,690 [wrapper] pandaids: 6930761646
[2025-12-17 13:34:07] 2025-12-17 12:34:07,706 [wrapper] cleanup supervisor_pilot 1564923 1546259
[2025-12-17 13:34:07] 2025-12-17 12:34:07,709 [wrapper] Test setup, not cleaning
[2025-12-17 13:34:07] 2025-12-17 12:34:07,712 [wrapper] apfmon messages muted
[2025-12-17 13:34:07] 2025-12-17 12:34:07,715 [wrapper] ==== wrapper stdout END ====
[2025-12-17 13:34:07] 2025-12-17 12:34:07,718 [wrapper] ==== wrapper stderr END ====
[2025-12-17 13:34:07]  *** Error codes and diagnostics ***
[2025-12-17 13:34:07]     "exeErrorCode": 0,
[2025-12-17 13:34:07]     "exeErrorDiag": "",
[2025-12-17 13:34:07]     "pilotErrorCode": 0,
[2025-12-17 13:34:07]     "pilotErrorDiag": "",
[2025-12-17 13:34:07]  *** Listing of results directory ***
[2025-12-17 13:34:07] total 335404
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-17 13:34:07] -rwx------ 1 boinc boinc     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      5112 Dec 16 07:11 queuedata.json
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc       100 Dec 17 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 13:34:07] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 11:58 run_atlas
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc       105 Dec 17 11:58 job.xml
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc 192922892 Dec 17 11:58 EVNT.47886829._000520.pool.root.1
[2025-12-17 13:34:07] drwxrwx--x 2 boinc boinc      4096 Dec 17 11:58 shared
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc    592417 Dec 17 11:58 input.tar.gz
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc     15847 Dec 17 11:58 start_atlas.sh
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc         0 Dec 17 11:58 boinc_setup_complete
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      6199 Dec 17 11:58 init_data.xml
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc         0 Dec 17 11:58 boinc_lockfile
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      2539 Dec 17 11:58 pandaJob.out
[2025-12-17 13:34:07] -rw------- 1 boinc boinc    987423 Dec 17 11:58 agis_schedconf.cvmfs.json
[2025-12-17 13:34:07] -rw------- 1 boinc boinc   1516240 Dec 17 11:58 agis_ddmendpoints.agis.ALL.json
[2025-12-17 13:34:07] drwx------ 5 boinc boinc      4096 Dec 17 11:58 pilot3
[2025-12-17 13:34:07] -rw------- 1 boinc boinc 144443478 Dec 17 13:33 HITS.47886831._012653.pool.root.1
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc       529 Dec 17 13:33 boinc_task_state.xml
[2025-12-17 13:34:07] -rw------- 1 boinc boinc      1027 Dec 17 13:33 memory_monitor_summary.json
[2025-12-17 13:34:07] -rw------- 1 boinc boinc    262528 Dec 17 13:33 log.47886831._012653.job.log.tgz.1
[2025-12-17 13:34:07] -rw------- 1 boinc boinc      7758 Dec 17 13:33 heartbeat.json
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc        27 Dec 17 13:33 wrapper_checkpoint.txt
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      8192 Dec 17 13:33 boinc_mmap_file
[2025-12-17 13:34:07] -rw------- 1 boinc boinc       747 Dec 17 13:34 pilotlog.txt
[2025-12-17 13:34:07] -rw------- 1 boinc boinc        95 Dec 17 13:34 pilot_heartbeat.json
[2025-12-17 13:34:07] -rw------- 1 boinc boinc    830455 Dec 17 13:34 log.47886831._012653.job.log.1
[2025-12-17 13:34:07] -rw------- 1 boinc boinc       357 Dec 17 13:34 output.list
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc       620 Dec 17 13:34 runtime_log
[2025-12-17 13:34:07] -rw------- 1 boinc boinc   1116160 Dec 17 13:34 result.tar.gz
[2025-12-17 13:34:07] -rw------- 1 boinc boinc       662 Dec 17 13:34 fWYNDmaPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6gZKDmQGig8m.diag
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      8917 Dec 17 13:34 runtime_log.err
[2025-12-17 13:34:07] -rw-r--r-- 1 boinc boinc      7844 Dec 17 13:34 stderr.txt
[2025-12-17 13:34:07] HITS file was successfully produced:
[2025-12-17 13:34:07] -rw------- 1 boinc boinc 144443478 Dec 17 13:33 shared/HITS.pool.root.1
[2025-12-17 13:34:07]  *** Contents of shared directory: ***
[2025-12-17 13:34:07] total 331160
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc 192922892 Dec 17 11:58 ATLAS.root_0
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc    592417 Dec 17 11:58 input.tar.gz
[2025-12-17 13:34:07] -rw-r--r-- 2 boinc boinc     15847 Dec 17 11:58 start_atlas.sh
[2025-12-17 13:34:07] -rw------- 1 boinc boinc 144443478 Dec 17 13:33 HITS.pool.root.1
[2025-12-17 13:34:07] -rw------- 1 boinc boinc   1116160 Dec 17 13:34 result.tar.gz
13:34:09 (1542524): run_atlas exited; CPU time 16412.274929
13:34:09 (1542524): called boinc_finish(0)

</stderr_txt>
]]>

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