Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:04:36 (555951): wrapper (7.7.26015): starting
04:04:36 (555951): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 04:04:36] Arguments: --nthreads 12
[2025-12-17 04:04:36] Threads: 12
[2025-12-17 04:04:36] Checking for CVMFS
[2025-12-17 04:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 04:04:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 04:04:36] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 04:04:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 04:04:37] 2.11.0.0 1971323 2872 100980 154097 0 188 3468291 6144001 12683 130560 0 36055318 99.999 107882 183 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-12-17 04:04:37] CVMFS is ok
[2025-12-17 04:04:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 04:04:37] Checking for apptainer binary...
[2025-12-17 04:04:37] apptainer is not installed, using version from CVMFS
[2025-12-17 04:04:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 04:04:37] radiat0r
[2025-12-17 04:04:37] apptainer works
[2025-12-17 04:04:37] Set ATHENA_PROC_NUMBER=12
[2025-12-17 04:04:37] Set ATHENA_CORE_NUMBER=12
[2025-12-17 04:04:37] Starting ATLAS job with PandaID=6930761562
[2025-12-17 04:04:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 04:56:03]  *** The last 200 lines of the pilot log: ***
[2025-12-17 04:56:03]  status=None
[2025-12-17 04:56:03]  status_code=0
[2025-12-17 04:56:03]  storage_token=
[2025-12-17 04:56:03]  surl=/var/lib/boinc/slots/14/PanDA_Pilot-6930761562/log.47886831._012569.job.log.tgz.1
[2025-12-17 04:56:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/cd/log.47886831._012569.job.log.tgz.1
[2025-12-17 04:56:03]  workdir=None
[2025-12-17 04:56:03] ]
[2025-12-17 04:56:03] 2025-12-17 04:54:45,062 | INFO     | time since job start (2993s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:45,093 | INFO     | transferring file log.47886831._012569.job.log.tgz.1 from /var/lib/boinc/slots/14/PanDA_Pilot-6930761562/log.47886831._012569.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 04:56:03] 2025-12-17 04:54:45,093 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/14/PanDA_Pilot-6930761562/log.47886831._012569.job.log.tgz.1 /var/lib/boinc/slots/14/log.47886831._012569.j
[2025-12-17 04:56:03] 2025-12-17 04:54:45,123 | INFO     | adding to output.list: log.47886831._012569.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/cd/log.47886831._012569.job.log.tg
[2025-12-17 04:56:03] 2025-12-17 04:54:45,124 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 04:56:03] 2025-12-17 04:54:45,124 | INFO     | summary of transferred files:
[2025-12-17 04:56:03] 2025-12-17 04:54:45,124 | INFO     |  -- lfn=log.47886831._012569.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 04:56:03] 2025-12-17 04:54:45,125 | INFO     | stage-out finished correctly
[2025-12-17 04:56:03] 2025-12-17 04:54:47,084 | INFO     | time since job start (2995s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:48,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 04:56:03] 2025-12-17 04:54:49,090 | INFO     | time since job start (2997s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:50,853 | INFO     | job 6930761562 has state=finished
[2025-12-17 04:56:03] 2025-12-17 04:54:50,854 | INFO     | preparing for final server update for job 6930761562 in state='finished'
[2025-12-17 04:56:03] 2025-12-17 04:54:50,855 | INFO     | this job has now completed (state=finished)
[2025-12-17 04:56:03] 2025-12-17 04:54:50,856 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 04:56:03] 2025-12-17 04:54:50,856 | INFO     | log transfer has been attempted: DONE
[2025-12-17 04:56:03] 2025-12-17 04:54:50,856 | INFO     | job 6930761562 has finished - writing final server update
[2025-12-17 04:56:03] 2025-12-17 04:54:50,857 | INFO     | total number of processed events: 400 (read)
[2025-12-17 04:56:03] 2025-12-17 04:54:50,860 | INFO     | executing command: lscpu
[2025-12-17 04:56:03] 2025-12-17 04:54:51,054 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 04:56:03] 2025-12-17 04:54:51,103 | INFO     | time since job start (2999s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:51,533 | WARNING  | process 568826 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 04:56:03] 2025-12-17 04:54:51,533 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6930761562/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 04:56:03] 2025-12-17 04:54:52,105 | INFO     | number of running child processes to parent process 568826: 1
[2025-12-17 04:56:03] 2025-12-17 04:54:52,105 | INFO     | maximum number of monitored processes: 6
[2025-12-17 04:56:03] 2025-12-17 04:54:53,110 | INFO     | time since job start (3001s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:54,608 | INFO     | monitor loop #211: job 0:6930761562 is in state 'finished'
[2025-12-17 04:56:03] 2025-12-17 04:54:54,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 04:56:03] 2025-12-17 04:54:55,002 | INFO     | PID=560673 has CPU usage=21.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 04:56:03] 2025-12-17 04:54:55,003 | INFO     | .. there are 14 such processes running
[2025-12-17 04:56:03] 2025-12-17 04:54:56,003 | INFO     | time since job start (3004s) is within the limit (174528.0s)
[2025-12-17 04:56:03] 2025-12-17 04:54:56,897 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 04:56:03] 2025-12-17 04:54:56,946 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2416.7604882812493
[2025-12-17 04:56:03] 2025-12-17 04:54:57,052 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6930761562/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,054 | INFO     | extracted standard info from prmon json
[2025-12-17 04:56:03] 2025-12-17 04:54:57,054 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 04:56:03] 2025-12-17 04:54:57,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 04:56:03] 2025-12-17 04:54:57,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 04:56:03] 2025-12-17 04:54:57,055 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 04:56:03] 2025-12-17 04:54:57,057 | INFO     | fitting pss+swap vs Time
[2025-12-17 04:56:03] 2025-12-17 04:54:57,057 | INFO     | sum of square deviations: 22960430.5
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | sum of deviations: 292102953.0
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | mean x: 1765945880.5
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | mean y: 2642457.8095238097
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | intersect: -22463748428.556267
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | chi2: 0.000259675707051748
[2025-12-17 04:56:03] 2025-12-17 04:54:57,058 | INFO     | current memory leak: 12.72 B/s (using 42 data points, chi2=0.00)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | could have reported an average CPU frequency of 2396 MHz (5 samples)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | ..............................
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | . Timing measurements:
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | . get job = 0 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | . initial setup = 1 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,059 | INFO     | . payload setup = 7 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,060 | INFO     | . stage-in = 0 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,060 | INFO     | . payload execution = 2962 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,060 | INFO     | . stage-out = 0 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,060 | INFO     | . log creation = 0 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,060 | INFO     | ..............................
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | 
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | job summary report
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | --------------------------------------------------
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | PanDA job id: 6930761562
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | task id: 47886831
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | errors: (none)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 04:56:03] 2025-12-17 04:54:57,590 | INFO     | pilot state: finished 
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | transexitcode: 0
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | exeerrorcode: 0
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | exeerrordiag: 
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | exitcode: 0
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | exitmsg: OK
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | cpuconsumptiontime: 32227 s
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | nevents: 400
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | neventsw: 0
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | pid: 568826
[2025-12-17 04:56:03] 2025-12-17 04:54:57,591 | INFO     | pgrp: 568826
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | corecount: 12
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | event service: False
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | sizes: {0: 2283992, 7: 2284254, 11: 2284282, 2974: 2309835, 2975: 2318835, 2978: 2318891, 2987: 2319245}
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | --------------------------------------------------
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | 
[2025-12-17 04:56:03] 2025-12-17 04:54:57,592 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-12-17 04:56:03] 2025-12-17 04:54:57,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,624 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,625 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 04:56:03] 2025-12-17 04:54:57,626 | INFO     | job 6930761562 has completed (purged errors)
[2025-12-17 04:56:03] 2025-12-17 04:54:57,626 | INFO     | overall cleanup function is called
[2025-12-17 04:56:03] 2025-12-17 04:54:58,636 | INFO     | --- collectZombieJob: --- 10, [568826]
[2025-12-17 04:56:03] 2025-12-17 04:54:58,636 | INFO     | zombie collector waiting for pid 568826
[2025-12-17 04:56:03] 2025-12-17 04:54:58,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 04:56:03] 2025-12-17 04:54:58,636 | INFO     | collected zombie processes
[2025-12-17 04:56:03] 2025-12-17 04:54:58,636 | INFO     | will attempt to kill all subprocesses of pid=568826
[2025-12-17 04:56:03] 2025-12-17 04:54:59,246 | INFO     | process IDs to be killed: [568826] (in reverse order)
[2025-12-17 04:56:03] 2025-12-17 04:54:59,489 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 04:56:03] 2025-12-17 04:54:59,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 04:56:03] 2025-12-17 04:54:59,515 | INFO     | did not find any defunct processes belonging to 568826
[2025-12-17 04:56:03] 2025-12-17 04:54:59,540 | INFO     | did not find any defunct processes belonging to 568826
[2025-12-17 04:56:03] 2025-12-17 04:54:59,541 | INFO     | ready for new job
[2025-12-17 04:56:03] 2025-12-17 04:54:59,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 04:56:03] 2025-12-17 04:54:59,543 | INFO     | ***************************************
[2025-12-17 04:56:03] 2025-12-17 04:54:59,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 04:56:03] 2025-12-17 04:54:59,543 | INFO     | ***************************************
[2025-12-17 04:56:03] 2025-12-17 04:54:59,543 | INFO     | 
[2025-12-17 04:56:03] 2025-12-17 04:54:59,580 | INFO     | architecture information:
[2025-12-17 04:56:03] 2025-12-17 04:54:59,581 | INFO     | executing command: cat /etc/os-release
[2025-12-17 04:56:03] 2025-12-17 04:54:59,601 | INFO     | cat /etc/os-release:
[2025-12-17 04:56:03] NAME="CentOS Linux"
[2025-12-17 04:56:03] VERSION="7 (Core)"
[2025-12-17 04:56:03] ID="centos"
[2025-12-17 04:56:03] ID_LIKE="rhel fedora"
[2025-12-17 04:56:03] VERSION_ID="7"
[2025-12-17 04:56:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 04:56:03] ANSI_COLOR="0;31"
[2025-12-17 04:56:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 04:56:03] HOME_URL="https://www.centos.org/"
[2025-12-17 04:56:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 04:56:03] 
[2025-12-17 04:56:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 04:56:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 04:56:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 04:56:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 04:56:03] 
[2025-12-17 04:56:03] 2025-12-17 04:54:59,601 | INFO     | ***************************************
[2025-12-17 04:56:03] 2025-12-17 04:55:00,104 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-12-17 04:56:03] 2025-12-17 04:55:00,129 | INFO     | sufficient remaining disk space (1704060780544 B)
[2025-12-17 04:56:03] 2025-12-17 04:55:00,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 04:56:03] 2025-12-17 04:55:00,130 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 04:56:03] 2025-12-17 04:55:00,130 | INFO     | update_server=False
[2025-12-17 04:56:03] 2025-12-17 04:55:00,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 04:56:03] 2025-12-17 04:55:00,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 04:56:03] 2025-12-17 04:55:00,330 | INFO     | all data control threads have been joined
[2025-12-17 04:56:03] 2025-12-17 04:55:00,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:56:03] 2025-12-17 04:55:00,625 | INFO     | aborting loop
[2025-12-17 04:56:03] 2025-12-17 04:55:00,632 | INFO     | all payload control threads have been joined
[2025-12-17 04:56:03] 2025-12-17 04:55:00,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 04:56:03] 2025-12-17 04:55:01,135 | INFO     | [job] retrieve thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,335 | INFO     | [payload] validate_post thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,336 | INFO     | [data] control thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,342 | INFO     | [data] copytool_in thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,543 | INFO     | all job control threads have been joined
[2025-12-17 04:56:03] 2025-12-17 04:55:01,630 | INFO     | [job] job monitor thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,637 | INFO     | [payload] control thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,677 | INFO     | [payload] failed_post thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,708 | INFO     | [job] validate thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,760 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:01,924 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:02,004 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:02,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 04:56:03] 2025-12-17 04:55:02,549 | INFO     | [job] control thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:02,745 | INFO     | [data] copytool_out thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:03,194 | INFO     | [job] queue monitor thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:04,137 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 04:56:03] 2025-12-17 04:55:29,871 | INFO     | PID=560673 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 04:56:03] 2025-12-17 04:55:29,872 | INFO     | .. there are 14 such processes running
[2025-12-17 04:56:03] 2025-12-17 04:55:29,872 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 04:56:03] 2025-12-17 04:55:29,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 04:56:03] 2025-12-17 04:55:29,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 04:56:03] 2025-12-17 04:55:56,545 | INFO     | [monitor] cgroup control has ended
[2025-12-17 04:56:03] 2025-12-17 04:55:57,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594565470016)>', '<ExcThread(monitor, started 140593984423680)>']
[2025-12-17 04:56:03] 2025-12-17 04:55:58,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 04:56:03] 2025-12-17 04:55:58,008 | INFO     | [monitor] control thread has ended
[2025-12-17 04:56:03] 2025-12-17 04:56:02,724 | INFO     | all workflow threads have been joined
[2025-12-17 04:56:03] 2025-12-17 04:56:02,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 04:56:03] 2025-12-17 04:56:02,725 | INFO     | traces error code: 0
[2025-12-17 04:56:03] 2025-12-17 04:56:02,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 04:56:03] 2025-12-17 04:56:02,894 [wrapper] ==== pilot stdout END ====
[2025-12-17 04:56:03] 2025-12-17 04:56:02,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 04:56:03] 2025-12-17 04:56:02,899 [wrapper] pilotpid: 560673
[2025-12-17 04:56:03] 2025-12-17 04:56:02,902 [wrapper] Pilot exit status: 0
[2025-12-17 04:56:03] 2025-12-17 04:56:02,913 [wrapper] pandaids: 6930761562
[2025-12-17 04:56:03] 2025-12-17 04:56:03,087 [wrapper] cleanup supervisor_pilot  882403 560674
[2025-12-17 04:56:03] 2025-12-17 04:56:03,092 [wrapper] Test setup, not cleaning
[2025-12-17 04:56:03] 2025-12-17 04:56:03,095 [wrapper] apfmon messages muted
[2025-12-17 04:56:03] 2025-12-17 04:56:03,098 [wrapper] ==== wrapper stdout END ====
[2025-12-17 04:56:03] 2025-12-17 04:56:03,101 [wrapper] ==== wrapper stderr END ====
[2025-12-17 04:56:03]  *** Error codes and diagnostics ***
[2025-12-17 04:56:03]     "exeErrorCode": 0,
[2025-12-17 04:56:03]     "exeErrorDiag": "",
[2025-12-17 04:56:03]     "pilotErrorCode": 0,
[2025-12-17 04:56:03]     "pilotErrorDiag": "",
[2025-12-17 04:56:03]  *** Listing of results directory ***
[2025-12-17 04:56:03] total 342780
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc    579449 Dec 16 06:04 pilot3.tar.gz
[2025-12-17 04:56:03] -rwx------ 1 boinc boinc     36322 Dec 16 06:08 runpilot2-wrapper.sh
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc      5112 Dec 16 06:11 queuedata.json
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc       100 Dec 17 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 04:56:03] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 04:04 run_atlas
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc       105 Dec 17 04:04 job.xml
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc     15847 Dec 17 04:04 start_atlas.sh
[2025-12-17 04:56:03] drwxrwx--x 2 boinc boinc      4096 Dec 17 04:04 shared
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc    592414 Dec 17 04:04 input.tar.gz
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc      9417 Dec 17 04:04 init_data.xml
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc 192288300 Dec 17 04:04 EVNT.47886829._000517.pool.root.1
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc         0 Dec 17 04:04 boinc_setup_complete
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc         0 Dec 17 04:04 boinc_lockfile
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc      2538 Dec 17 04:04 pandaJob.out
[2025-12-17 04:56:03] -rw------- 1 boinc boinc    987409 Dec 17 04:04 agis_schedconf.cvmfs.json
[2025-12-17 04:56:03] -rw------- 1 boinc boinc   1516240 Dec 17 04:04 agis_ddmendpoints.agis.ALL.json
[2025-12-17 04:56:03] drwx------ 5 boinc boinc      4096 Dec 17 04:04 pilot3
[2025-12-17 04:56:03] -rw------- 1 boinc boinc 153200258 Dec 17 04:54 HITS.47886831._012569.pool.root.1
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc       529 Dec 17 04:54 boinc_task_state.xml
[2025-12-17 04:56:03] -rw------- 1 boinc boinc      1028 Dec 17 04:54 memory_monitor_summary.json
[2025-12-17 04:56:03] -rw------- 1 boinc boinc        95 Dec 17 04:54 pilot_heartbeat.json
[2025-12-17 04:56:03] -rw------- 1 boinc boinc    348398 Dec 17 04:54 log.47886831._012569.job.log.tgz.1
[2025-12-17 04:56:03] -rw------- 1 boinc boinc      7742 Dec 17 04:54 heartbeat.json
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc      8192 Dec 17 04:56 boinc_mmap_file
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc        27 Dec 17 04:56 wrapper_checkpoint.txt
[2025-12-17 04:56:03] -rw------- 1 boinc boinc      4826 Dec 17 04:56 pilotlog.txt
[2025-12-17 04:56:03] -rw------- 1 boinc boinc    449913 Dec 17 04:56 log.47886831._012569.job.log.1
[2025-12-17 04:56:03] -rw------- 1 boinc boinc       357 Dec 17 04:56 output.list
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc       620 Dec 17 04:56 runtime_log
[2025-12-17 04:56:03] -rw------- 1 boinc boinc    819200 Dec 17 04:56 result.tar.gz
[2025-12-17 04:56:03] -rw------- 1 boinc boinc       643 Dec 17 04:56 Z7UKDmTPdp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtGVKDmGqZEHn.diag
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc      8788 Dec 17 04:56 runtime_log.err
[2025-12-17 04:56:03] -rw-r--r-- 1 boinc boinc     21855 Dec 17 04:56 stderr.txt
[2025-12-17 04:56:03] HITS file was successfully produced:
[2025-12-17 04:56:03] -rw------- 1 boinc boinc 153200258 Dec 17 04:54 shared/HITS.pool.root.1
[2025-12-17 04:56:03]  *** Contents of shared directory: ***
[2025-12-17 04:56:03] total 338800
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc     15847 Dec 17 04:04 start_atlas.sh
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc    592414 Dec 17 04:04 input.tar.gz
[2025-12-17 04:56:03] -rw-r--r-- 2 boinc boinc 192288300 Dec 17 04:04 ATLAS.root_0
[2025-12-17 04:56:03] -rw------- 1 boinc boinc 153200258 Dec 17 04:54 HITS.pool.root.1
[2025-12-17 04:56:03] -rw------- 1 boinc boinc    819200 Dec 17 04:56 result.tar.gz
04:56:04 (555951): run_atlas exited; CPU time 32402.042427
04:56:04 (555951): called boinc_finish(0)

</stderr_txt>
]]>

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