Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:31:07 (568058): wrapper (7.7.26015): starting
04:31:07 (568058): wrapper: running run_atlas (--nthreads 4)
[2025-12-17 04:31:07] Arguments: --nthreads 4
[2025-12-17 04:31:07] Threads: 4
[2025-12-17 04:31:07] Checking for CVMFS
[2025-12-17 04:31:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 04:31:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 04:31:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 04:31:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 04:31:07] 2.13.2.0 15124 8362 64508 154106 1 188 2487031 4096000 3664 130560 21 20943718 99.995 374747 17 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-17 04:31:07] CVMFS is ok
[2025-12-17 04:31:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 04:31:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-17 04:31:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-17 04:31:07] Further information can be found at the LHC@home message board.
[2025-12-17 04:31:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 04:31:07] Checking for apptainer binary...
[2025-12-17 04:31:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 04:31:07] Running /usr/bin/apptainer --version
[2025-12-17 04:31:07] apptainer version 1.4.3
[2025-12-17 04:31:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 04:31:07] Taichi-Ubuntu
[2025-12-17 04:31:07] apptainer works
[2025-12-17 04:31:07] Set ATHENA_PROC_NUMBER=4
[2025-12-17 04:31:07] Set ATHENA_CORE_NUMBER=4
[2025-12-17 04:31:07] Starting ATLAS job with PandaID=6931012931
[2025-12-17 04:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 07:19:52]  *** The last 200 lines of the pilot log: ***
[2025-12-17 07:19:52] 2025-12-17 12:19:18,727 | INFO     | intersect: -16644799375.898489
[2025-12-17 07:19:52] 2025-12-17 12:19:18,728 | INFO     | chi2: 1.3517430920693996
[2025-12-17 07:19:52] 2025-12-17 12:19:18,728 | INFO     | current chi2=1.3517430920693996 (change=-0.08633691927384873 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,728 | INFO     | right removable region: 159
[2025-12-17 07:19:52] 2025-12-17 12:19:18,728 | INFO     | sum of square deviations: 1270051720.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,729 | INFO     | sum of deviations: -5633421370.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,729 | INFO     | mean x: 1765969065.5
[2025-12-17 07:19:52] 2025-12-17 12:19:18,729 | INFO     | mean y: 2332359.6875
[2025-12-17 07:19:52] 2025-12-17 12:19:18,729 | INFO     | intersect: 7835436882.664431
[2025-12-17 07:19:52] 2025-12-17 12:19:18,730 | INFO     | chi2: 0.04581771149959882
[2025-12-17 07:19:52] 2025-12-17 12:19:18,730 | INFO     | current chi2=0.04581771149959882 (change=96.60754551887624 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,730 | INFO     | sum of square deviations: 1154663510.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,732 | INFO     | sum of deviations: -1965511866.0000012
[2025-12-17 07:19:52] 2025-12-17 12:19:18,732 | INFO     | mean x: 1765969218.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,732 | INFO     | mean y: 2327505.6516129035
[2025-12-17 07:19:52] 2025-12-17 12:19:18,732 | INFO     | intersect: 3008427051.4575963
[2025-12-17 07:19:52] 2025-12-17 12:19:18,733 | INFO     | chi2: 0.028853493471091916
[2025-12-17 07:19:52] 2025-12-17 12:19:18,733 | INFO     | current chi2=0.028853493471091916 (change=37.0254590927254 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,733 | INFO     | sum of square deviations: 1046484737.5
[2025-12-17 07:19:52] 2025-12-17 12:19:18,734 | INFO     | sum of deviations: 1647686951.5
[2025-12-17 07:19:52] 2025-12-17 12:19:18,735 | INFO     | mean x: 1765969370.5
[2025-12-17 07:19:52] 2025-12-17 12:19:18,735 | INFO     | mean y: 2322424.993333333
[2025-12-17 07:19:52] 2025-12-17 12:19:18,735 | INFO     | intersect: -2778190834.543353
[2025-12-17 07:19:52] 2025-12-17 12:19:18,735 | INFO     | chi2: 0.006303964347807713
[2025-12-17 07:19:52] 2025-12-17 12:19:18,736 | INFO     | current chi2=0.006303964347807713 (change=78.15181598677607 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,736 | INFO     | sum of square deviations: 945282840.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,737 | INFO     | sum of deviations: 2386889068.999999
[2025-12-17 07:19:52] 2025-12-17 12:19:18,737 | INFO     | mean x: 1765969523.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,737 | INFO     | mean y: 2321349.475862069
[2025-12-17 07:19:52] 2025-12-17 12:19:18,738 | INFO     | intersect: -4456844915.126849
[2025-12-17 07:19:52] 2025-12-17 12:19:18,738 | INFO     | chi2: 0.0001410857153739626
[2025-12-17 07:19:52] 2025-12-17 12:19:18,738 | INFO     | current chi2=0.0001410857153739626 (change=97.76195251765618 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,739 | INFO     | sum of square deviations: 850825255.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | sum of deviations: 2039906490.0000005
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | mean x: 1765969675.5
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | mean y: 2321906.342857143
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | intersect: -4231700275.092795
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | chi2: 8.972231698839685e-05
[2025-12-17 07:19:52] 2025-12-17 12:19:18,740 | INFO     | current chi2=8.972231698839685e-05 (change=36.40581064455861 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,741 | INFO     | sum of square deviations: 762879420.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,741 | INFO     | sum of deviations: 1858515608.9999998
[2025-12-17 07:19:52] 2025-12-17 12:19:18,741 | INFO     | mean x: 1765969828.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | mean y: 2322220.6592592592
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | intersect: -4299907469.009189
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | chi2: 8.755599362657244e-05
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | current chi2=8.755599362657244e-05 (change=2.414475500119514 %)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | left removable region: 60
[2025-12-17 07:19:52] 2025-12-17 12:19:18,742 | INFO     | sum of square deviations: 300842850.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,743 | INFO     | sum of deviations: 838229913.9999998
[2025-12-17 07:19:52] 2025-12-17 12:19:18,743 | INFO     | mean x: 1765970560.0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,743 | INFO     | mean y: 2323940.222222222
[2025-12-17 07:19:52] 2025-12-17 12:19:18,743 | INFO     | intersect: -4918149824.187772
[2025-12-17 07:19:52] 2025-12-17 12:19:18,743 | INFO     | chi2: 5.3874929539402386e-05
[2025-12-17 07:19:52] 2025-12-17 12:19:18,744 | INFO     | current memory leak: 2.79 B/s (using 99 data points, chi2=0.00)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,744 | INFO     | could have reported an average CPU frequency of 3198 MHz (9 samples)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,744 | INFO     | ..............................
[2025-12-17 07:19:52] 2025-12-17 12:19:18,744 | INFO     | . Timing measurements:
[2025-12-17 07:19:52] 2025-12-17 12:19:18,744 | INFO     | . get job = 0 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . initial setup = 4 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . payload setup = 7 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . stage-in = 0 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . payload execution = 10039 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . stage-out = 0 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | . log creation = 0 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,745 | INFO     | ..............................
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | 
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | job summary report
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | --------------------------------------------------
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | PanDA job id: 6931012931
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | task id: 47898763
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | errors: (none)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 07:19:52] 2025-12-17 12:19:18,820 | INFO     | pilot state: finished 
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | transexitcode: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | exeerrorcode: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | exeerrordiag: 
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | exitcode: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | exitmsg: OK
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | cpuconsumptiontime: 39308 s
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | nevents: 400
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | neventsw: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | pid: 578740
[2025-12-17 07:19:52] 2025-12-17 12:19:18,821 | INFO     | pgrp: 578740
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | corecount: 4
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | event service: False
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | sizes: {0: 2283972, 1: 2283972, 5: 2284262, 11: 2284318, 10051: 2312964, 10052: 2321990, 10055: 2322174, 10061: 2322432}
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | --------------------------------------------------
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | 
[2025-12-17 07:19:52] 2025-12-17 12:19:18,822 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/7
[2025-12-17 07:19:52] 2025-12-17 12:19:18,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 07:19:52] 2025-12-17 12:19:18,856 | INFO     | job 6931012931 has completed (purged errors)
[2025-12-17 07:19:52] 2025-12-17 12:19:18,856 | INFO     | overall cleanup function is called
[2025-12-17 07:19:52] 2025-12-17 12:19:19,864 | INFO     | --- collectZombieJob: --- 10, [578740]
[2025-12-17 07:19:52] 2025-12-17 12:19:19,865 | INFO     | zombie collector waiting for pid 578740
[2025-12-17 07:19:52] 2025-12-17 12:19:19,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 07:19:52] 2025-12-17 12:19:19,865 | INFO     | collected zombie processes
[2025-12-17 07:19:52] 2025-12-17 12:19:19,865 | INFO     | will attempt to kill all subprocesses of pid=578740
[2025-12-17 07:19:52] 2025-12-17 12:19:20,121 | INFO     | process IDs to be killed: [578740] (in reverse order)
[2025-12-17 07:19:52] 2025-12-17 12:19:20,218 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 07:19:52] 2025-12-17 12:19:20,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 07:19:52] 2025-12-17 12:19:20,227 | INFO     | did not find any defunct processes belonging to 578740
[2025-12-17 07:19:52] 2025-12-17 12:19:20,236 | INFO     | did not find any defunct processes belonging to 578740
[2025-12-17 07:19:52] 2025-12-17 12:19:20,237 | INFO     | ready for new job
[2025-12-17 07:19:52] 2025-12-17 12:19:20,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 07:19:52] 2025-12-17 12:19:20,239 | INFO     | ***************************************
[2025-12-17 07:19:52] 2025-12-17 12:19:20,239 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 07:19:52] 2025-12-17 12:19:20,240 | INFO     | ***************************************
[2025-12-17 07:19:52] 2025-12-17 12:19:20,240 | INFO     | 
[2025-12-17 07:19:52] 2025-12-17 12:19:20,243 | INFO     | architecture information:
[2025-12-17 07:19:52] 2025-12-17 12:19:20,243 | INFO     | executing command: cat /etc/os-release
[2025-12-17 07:19:52] 2025-12-17 12:19:20,266 | INFO     | cat /etc/os-release:
[2025-12-17 07:19:52] NAME="CentOS Linux"
[2025-12-17 07:19:52] VERSION="7 (Core)"
[2025-12-17 07:19:52] ID="centos"
[2025-12-17 07:19:52] ID_LIKE="rhel fedora"
[2025-12-17 07:19:52] VERSION_ID="7"
[2025-12-17 07:19:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 07:19:52] ANSI_COLOR="0;31"
[2025-12-17 07:19:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 07:19:52] HOME_URL="https://www.centos.org/"
[2025-12-17 07:19:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 07:19:52] 
[2025-12-17 07:19:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 07:19:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 07:19:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 07:19:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 07:19:52] 
[2025-12-17 07:19:52] 2025-12-17 12:19:20,267 | INFO     | ***************************************
[2025-12-17 07:19:52] 2025-12-17 12:19:20,770 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/7
[2025-12-17 07:19:52] 2025-12-17 12:19:20,793 | INFO     | sufficient remaining disk space (376260526080 B)
[2025-12-17 07:19:52] 2025-12-17 12:19:20,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 07:19:52] 2025-12-17 12:19:20,793 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 07:19:52] 2025-12-17 12:19:20,794 | INFO     | update_server=False
[2025-12-17 07:19:52] 2025-12-17 12:19:20,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 07:19:52] 2025-12-17 12:19:20,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:19:52] 2025-12-17 12:19:20,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 07:19:52] 2025-12-17 12:19:21,710 | INFO     | all data control threads have been joined
[2025-12-17 07:19:52] 2025-12-17 12:19:21,746 | INFO     | all job control threads have been joined
[2025-12-17 07:19:52] 2025-12-17 12:19:21,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:19:52] 2025-12-17 12:19:21,758 | INFO     | aborting loop
[2025-12-17 07:19:52] 2025-12-17 12:19:21,799 | INFO     | [job] retrieve thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:21,800 | INFO     | [job] queue monitor thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:21,834 | INFO     | [job] validate thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:21,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,143 | INFO     | all payload control threads have been joined
[2025-12-17 07:19:52] 2025-12-17 12:19:22,197 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,339 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,499 | INFO     | [payload] validate_post thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,632 | INFO     | [payload] failed_post thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,716 | INFO     | [data] control thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,751 | INFO     | [job] control thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,763 | INFO     | [job] job monitor thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,783 | INFO     | [data] copytool_in thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:22,800 | INFO     | [data] copytool_out thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:23,046 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:23,148 | INFO     | [payload] control thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:23,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 07:19:52] 2025-12-17 12:19:27,340 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 07:19:52] 2025-12-17 12:19:35,586 | INFO     | [monitor] cgroup control has ended
[2025-12-17 07:19:52] 2025-12-17 12:19:37,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124424812418880)>', '<ExcThread(monitor, started 124423591950080)>']
[2025-12-17 07:19:52] 2025-12-17 12:19:42,285 | INFO     | all workflow threads have been joined
[2025-12-17 07:19:52] 2025-12-17 12:19:42,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 07:19:52] 2025-12-17 12:19:42,286 | INFO     | traces error code: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:42,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 07:19:52] 2025-12-17 12:19:52,067 | INFO     | PID=571971 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 07:19:52] 2025-12-17 12:19:52,067 | INFO     | .. there are 5 such processes running
[2025-12-17 07:19:52] 2025-12-17 12:19:52,067 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 07:19:52] 2025-12-17 12:19:52,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 07:19:52] 2025-12-17 12:19:52,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 07:19:52] 2025-12-17 12:19:52,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 07:19:52] 2025-12-17 12:19:52,068 | INFO     | [monitor] control thread has ended
[2025-12-17 07:19:52] 2025-12-17 12:19:52,225 [wrapper] ==== pilot stdout END ====
[2025-12-17 07:19:52] 2025-12-17 12:19:52,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 07:19:52] 2025-12-17 12:19:52,231 [wrapper] pilotpid: 571971
[2025-12-17 07:19:52] 2025-12-17 12:19:52,236 [wrapper] Pilot exit status: 0
[2025-12-17 07:19:52] 2025-12-17 12:19:52,249 [wrapper] pandaids: 6931012931
[2025-12-17 07:19:52] 2025-12-17 12:19:52,300 [wrapper] cleanup supervisor_pilot  751183 571972
[2025-12-17 07:19:52] 2025-12-17 12:19:52,304 [wrapper] Test setup, not cleaning
[2025-12-17 07:19:52] 2025-12-17 12:19:52,307 [wrapper] apfmon messages muted
[2025-12-17 07:19:52] 2025-12-17 12:19:52,310 [wrapper] ==== wrapper stdout END ====
[2025-12-17 07:19:52] 2025-12-17 12:19:52,314 [wrapper] ==== wrapper stderr END ====
[2025-12-17 07:19:52]  *** Error codes and diagnostics ***
[2025-12-17 07:19:52]     "exeErrorCode": 0,
[2025-12-17 07:19:52]     "exeErrorDiag": "",
[2025-12-17 07:19:52]     "pilotErrorCode": 0,
[2025-12-17 07:19:52]     "pilotErrorDiag": "",
[2025-12-17 07:19:52]  *** Listing of results directory ***
[2025-12-17 07:19:52] total 446248
[2025-12-17 07:19:52] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec 16 04:01 pilot3.tar.gz
[2025-12-17 07:19:52] -rwx------ 1 whitlerd whitlerd     36322 Dec 16 04:01 runpilot2-wrapper.sh
[2025-12-17 07:19:52] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec 16 04:02 queuedata.json
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 17 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 07:19:52] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 17 04:31 run_atlas
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 17 04:31 job.xml
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd 224545892 Dec 17 04:31 EVNT.47898761._000755.pool.root.1
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 17 04:31 start_atlas.sh
[2025-12-17 07:19:52] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 17 04:31 shared
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd    592400 Dec 17 04:31 input.tar.gz
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd      9347 Dec 17 04:31 init_data.xml
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 17 04:31 boinc_setup_complete
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 17 04:31 boinc_lockfile
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd      2508 Dec 17 04:31 pandaJob.out
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd    987431 Dec 17 04:31 agis_schedconf.cvmfs.json
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd   1516240 Dec 17 04:31 agis_ddmendpoints.agis.ALL.json
[2025-12-17 07:19:52] drwx------ 5 whitlerd whitlerd      4096 Dec 17 04:31 pilot3
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd 224893014 Dec 17 07:18 HITS.47898763._019433.pool.root.1
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd       531 Dec 17 07:18 boinc_task_state.xml
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd      1037 Dec 17 07:19 memory_monitor_summary.json
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd    356287 Dec 17 07:19 log.47898763._019433.job.log.tgz.1
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd        95 Dec 17 07:19 pilot_heartbeat.json
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd      7782 Dec 17 07:19 heartbeat.json
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 17 07:19 boinc_mmap_file
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd        28 Dec 17 07:19 wrapper_checkpoint.txt
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd       821 Dec 17 07:19 pilotlog.txt
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd   1446835 Dec 17 07:19 log.47898763._019433.job.log.1
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd       357 Dec 17 07:19 output.list
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 17 07:19 runtime_log
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd   1822720 Dec 17 07:19 result.tar.gz
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd      9026 Dec 17 07:19 runtime_log.err
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd       652 Dec 17 07:19 MpBNDmI7fp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6NVKDmmTNqFo.diag
[2025-12-17 07:19:52] -rw-rw-r-- 1 whitlerd whitlerd     21040 Dec 17 07:19 stderr.txt
[2025-12-17 07:19:52] HITS file was successfully produced:
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd 224893014 Dec 17 07:18 shared/HITS.pool.root.1
[2025-12-17 07:19:52]  *** Contents of shared directory: ***
[2025-12-17 07:19:52] total 441292
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd 224545892 Dec 17 04:31 ATLAS.root_0
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 17 04:31 start_atlas.sh
[2025-12-17 07:19:52] -rw-r--r-- 2 whitlerd whitlerd    592400 Dec 17 04:31 input.tar.gz
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd 224893014 Dec 17 07:18 HITS.pool.root.1
[2025-12-17 07:19:52] -rw------- 1 whitlerd whitlerd   1822720 Dec 17 07:19 result.tar.gz
07:19:54 (568058): run_atlas exited; CPU time 39506.128832
07:19:54 (568058): called boinc_finish(0)

</stderr_txt>
]]>

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