Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:07:06 (2557076): wrapper (7.7.26015): starting
22:07:06 (2557076): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 22:07:06] Arguments: --nthreads 8
[2025-12-16 22:07:06] Threads: 8
[2025-12-16 22:07:06] Checking for CVMFS
[2025-12-16 22:07:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 22:07:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 22:07:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 22:07:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 22:07:08] 2.13.3.0 11830 59594 367840 154096 2 120 31123350 32935936 24744 16776704 0 320717881 99.498 405853606 32464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 22:07:08] CVMFS is ok
[2025-12-16 22:07:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 22:07:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 22:07:08] Further information can be found at the LHC@home message board.
[2025-12-16 22:07:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 22:07:08] Checking for apptainer binary...
[2025-12-16 22:07:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 22:07:08] Running /usr/bin/apptainer --version
[2025-12-16 22:07:08] apptainer version 1.4.5-2.el9
[2025-12-16 22:07:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 22:07:09] c6-8-25-1.aglt2.org
[2025-12-16 22:07:09] apptainer works
[2025-12-16 22:07:09] Set ATHENA_PROC_NUMBER=8
[2025-12-16 22:07:09] Set ATHENA_CORE_NUMBER=8
[2025-12-16 22:07:09] Starting ATLAS job with PandaID=6931484498
[2025-12-16 22:07:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:23:06]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:23:06] 2025-12-17 11:22:26,272 | INFO     | time since job start (29661s) is within the limit (174528.0s)
[2025-12-17 06:23:06] 2025-12-17 11:22:26,412 | INFO     | monitor loop #1645: job 0:6931484498 is in state 'finished'
[2025-12-17 06:23:06] 2025-12-17 11:22:26,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:23:06] 2025-12-17 11:22:28,280 | INFO     | time since job start (29663s) is within the limit (174528.0s)
[2025-12-17 06:23:06] 2025-12-17 11:22:28,919 | INFO     | monitor loop #1646: job 0:6931484498 is in state 'finished'
[2025-12-17 06:23:06] 2025-12-17 11:22:28,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,114 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 06:23:06] 2025-12-17 11:22:30,124 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2555.803989583334
[2025-12-17 06:23:06] 2025-12-17 11:22:30,287 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6931484498/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,292 | INFO     | extracted standard info from prmon json
[2025-12-17 06:23:06] 2025-12-17 11:22:30,292 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:23:06] 2025-12-17 11:22:30,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:23:06] 2025-12-17 11:22:30,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:23:06] 2025-12-17 11:22:30,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:23:06] 2025-12-17 11:22:30,313 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:23:06] 2025-12-17 11:22:30,314 | INFO     | sum of square deviations: 35156646491.85744
[2025-12-17 06:23:06] 2025-12-17 11:22:30,324 | INFO     | sum of deviations: 157054324313.2563
[2025-12-17 06:23:06] 2025-12-17 11:22:30,330 | INFO     | mean x: 1765955745.9194214
[2025-12-17 06:23:06] 2025-12-17 11:22:30,330 | INFO     | mean y: 2490086.0578512396
[2025-12-17 06:23:06] 2025-12-17 11:22:30,330 | INFO     | intersect: -7886515667.284521
[2025-12-17 06:23:06] 2025-12-17 11:22:30,331 | INFO     | chi2: 2.983198179826551
[2025-12-17 06:23:06] 2025-12-17 11:22:30,332 | INFO     | sum of square deviations: 34078344000.968826
[2025-12-17 06:23:06] 2025-12-17 11:22:30,329 | INFO     | time since job start (29665s) is within the limit (174528.0s)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,346 | INFO     | sum of deviations: 185554555233.7829
[2025-12-17 06:23:06] 2025-12-17 11:22:30,346 | INFO     | mean x: 1765955593.4237995
[2025-12-17 06:23:06] 2025-12-17 11:22:30,346 | INFO     | mean y: 2494080.4050104385
[2025-12-17 06:23:06] 2025-12-17 11:22:30,346 | INFO     | intersect: -9613029041.58262
[2025-12-17 06:23:06] 2025-12-17 11:22:30,347 | INFO     | chi2: 2.294253879403645
[2025-12-17 06:23:06] 2025-12-17 11:22:30,347 | INFO     | current chi2=2.294253879403645 (change=23.094151273012738 %)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,347 | INFO     | right removable region: 478
[2025-12-17 06:23:06] 2025-12-17 11:22:30,348 | INFO     | sum of square deviations: 34078220170.968826
[2025-12-17 06:23:06] 2025-12-17 11:22:30,365 | INFO     | sum of deviations: 50873452945.88727
[2025-12-17 06:23:06] 2025-12-17 11:22:30,365 | INFO     | mean x: 1765955898.4237995
[2025-12-17 06:23:06] 2025-12-17 11:22:30,365 | INFO     | mean y: 2505057.325678497
[2025-12-17 06:23:06] 2025-12-17 11:22:30,366 | INFO     | intersect: -2633790906.848824
[2025-12-17 06:23:06] 2025-12-17 11:22:30,366 | INFO     | chi2: 0.8764015088059457
[2025-12-17 06:23:06] 2025-12-17 11:22:30,367 | INFO     | current chi2=0.8764015088059457 (change=70.6220822092047 %)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,367 | INFO     | sum of square deviations: 33022102312.415752
[2025-12-17 06:23:06] 2025-12-17 11:22:30,381 | INFO     | sum of deviations: 31880143481.426155
[2025-12-17 06:23:06] 2025-12-17 11:22:30,382 | INFO     | mean x: 1765956050.9261603
[2025-12-17 06:23:06] 2025-12-17 11:22:30,382 | INFO     | mean y: 2507801.4978902955
[2025-12-17 06:23:06] 2025-12-17 11:22:30,382 | INFO     | intersect: -1702378572.8699603
[2025-12-17 06:23:06] 2025-12-17 11:22:30,383 | INFO     | chi2: 0.8218093234202131
[2025-12-17 06:23:06] 2025-12-17 11:22:30,383 | INFO     | current chi2=0.8218093234202131 (change=6.2291295527448165 %)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,383 | INFO     | left removable region: 20
[2025-12-17 06:23:06] 2025-12-17 11:22:30,384 | INFO     | sum of square deviations: 29789647893.163925
[2025-12-17 06:23:06] 2025-12-17 11:22:30,397 | INFO     | sum of deviations: 26159364698.480354
[2025-12-17 06:23:06] 2025-12-17 11:22:30,398 | INFO     | mean x: 1765956172.9366813
[2025-12-17 06:23:06] 2025-12-17 11:22:30,398 | INFO     | mean y: 2517334.9475982534
[2025-12-17 06:23:06] 2025-12-17 11:22:30,398 | INFO     | intersect: -1548232500.534154
[2025-12-17 06:23:06] 2025-12-17 11:22:30,399 | INFO     | chi2: 0.04028630052277048
[2025-12-17 06:23:06] 2025-12-17 11:22:30,399 | INFO     | current memory leak: 0.88 B/s (using 458 data points, chi2=0.04)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,400 | INFO     | could have reported an average CPU frequency of 2545 MHz (20 samples)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,400 | INFO     | ..............................
[2025-12-17 06:23:06] 2025-12-17 11:22:30,400 | INFO     | . Timing measurements:
[2025-12-17 06:23:06] 2025-12-17 11:22:30,400 | INFO     | . get job = 0 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,404 | INFO     | . initial setup = 4 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | . payload setup = 40 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | . stage-in = 0 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | . payload execution = 29518 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | . stage-out = 6 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | . log creation = 0 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,405 | INFO     | ..............................
[2025-12-17 06:23:06] 2025-12-17 11:22:30,760 | INFO     | 
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | job summary report
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | --------------------------------------------------
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | PanDA job id: 6931484498
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | task id: 47905857
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | errors: (none)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | pilot state: finished 
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | transexitcode: 0
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | exeerrorcode: 0
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | exeerrordiag: 
[2025-12-17 06:23:06] 2025-12-17 11:22:30,761 | INFO     | exitcode: 0
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | exitmsg: OK
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | cpuconsumptiontime: 68911 s
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | nevents: 400
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | neventsw: 0
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | pid: 2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | pgrp: 2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | corecount: 8
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | event service: False
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | sizes: {0: 2283680, 1: 2283764, 2: 2283963, 13: 2283963, 24: 2284019, 31: 2284309, 35: 2284465, 29563: 2321549, 29564: 2321548, 29571: 2330630, 29572: 2330686, 296
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | --------------------------------------------------
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | 
[2025-12-17 06:23:06] 2025-12-17 11:22:30,762 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:23:06] 2025-12-17 11:22:30,823 | INFO     | job 6931484498 has completed (purged errors)
[2025-12-17 06:23:06] 2025-12-17 11:22:30,823 | INFO     | overall cleanup function is called
[2025-12-17 06:23:06] 2025-12-17 11:22:31,836 | INFO     | --- collectZombieJob: --- 10, [2580818]
[2025-12-17 06:23:06] 2025-12-17 11:22:31,837 | INFO     | zombie collector waiting for pid 2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:31,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:23:06] 2025-12-17 11:22:31,837 | INFO     | collected zombie processes
[2025-12-17 06:23:06] 2025-12-17 11:22:31,837 | INFO     | will attempt to kill all subprocesses of pid=2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:34,136 | INFO     | process IDs to be killed: [2580818] (in reverse order)
[2025-12-17 06:23:06] 2025-12-17 11:22:34,661 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:23:06] 2025-12-17 11:22:34,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:23:06] 2025-12-17 11:22:34,702 | INFO     | did not find any defunct processes belonging to 2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:34,741 | INFO     | did not find any defunct processes belonging to 2580818
[2025-12-17 06:23:06] 2025-12-17 11:22:34,742 | INFO     | ready for new job
[2025-12-17 06:23:06] 2025-12-17 11:22:34,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:23:06] 2025-12-17 11:22:34,749 | INFO     | ***************************************
[2025-12-17 06:23:06] 2025-12-17 11:22:34,749 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:23:06] 2025-12-17 11:22:34,750 | INFO     | ***************************************
[2025-12-17 06:23:06] 2025-12-17 11:22:34,750 | INFO     | 
[2025-12-17 06:23:06] 2025-12-17 11:22:34,760 | INFO     | architecture information:
[2025-12-17 06:23:06] 2025-12-17 11:22:34,764 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:23:06] 2025-12-17 11:22:34,810 | INFO     | cat /etc/os-release:
[2025-12-17 06:23:06] NAME="CentOS Linux"
[2025-12-17 06:23:06] VERSION="7 (Core)"
[2025-12-17 06:23:06] ID="centos"
[2025-12-17 06:23:06] ID_LIKE="rhel fedora"
[2025-12-17 06:23:06] VERSION_ID="7"
[2025-12-17 06:23:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:23:06] ANSI_COLOR="0;31"
[2025-12-17 06:23:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:23:06] HOME_URL="https://www.centos.org/"
[2025-12-17 06:23:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:23:06] 
[2025-12-17 06:23:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:23:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:23:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:23:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:23:06] 
[2025-12-17 06:23:06] 2025-12-17 11:22:34,810 | INFO     | ***************************************
[2025-12-17 06:23:06] 2025-12-17 11:22:35,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-17 06:23:06] 2025-12-17 11:22:35,376 | INFO     | sufficient remaining disk space (74362912768 B)
[2025-12-17 06:23:06] 2025-12-17 11:22:35,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:23:06] 2025-12-17 11:22:35,377 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:23:06] 2025-12-17 11:22:35,377 | INFO     | update_server=False
[2025-12-17 06:23:06] 2025-12-17 11:22:35,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:23:06] 2025-12-17 11:22:35,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:23:06] 2025-12-17 11:22:35,377 | INFO     | aborting loop
[2025-12-17 06:23:06] 2025-12-17 11:22:35,566 | INFO     | all job control threads have been joined
[2025-12-17 06:23:06] 2025-12-17 11:22:35,606 | INFO     | all payload control threads have been joined
[2025-12-17 06:23:06] 2025-12-17 11:22:35,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:23:06] 2025-12-17 11:22:35,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:23:06] 2025-12-17 11:22:36,161 | INFO     | all data control threads have been joined
[2025-12-17 06:23:06] 2025-12-17 11:22:36,384 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,384 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,576 | INFO     | [job] control thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,612 | INFO     | [payload] control thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,670 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:36,928 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,167 | INFO     | [data] control thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,314 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,485 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,486 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,493 | INFO     | [job] validate thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,516 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,759 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:37,971 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:38,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:23:06] 2025-12-17 11:22:42,165 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:23:06] 2025-12-17 11:22:58,638 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:23:06] 2025-12-17 11:22:59,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791970854720)>', '<ExcThread(monitor, started 139791102367488)>']
[2025-12-17 06:23:06] 2025-12-17 11:23:02,650 [wrapper] supervise_pilot (15 min periods counter: 34)
[2025-12-17 06:23:06] 2025-12-17 11:23:04,762 | INFO     | all workflow threads have been joined
[2025-12-17 06:23:06] 2025-12-17 11:23:04,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:23:06] 2025-12-17 11:23:04,763 | INFO     | traces error code: 0
[2025-12-17 06:23:06] 2025-12-17 11:23:04,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:23:06] 2025-12-17 11:23:04,820 | INFO     | PID=2564789 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 06:23:06] 2025-12-17 11:23:04,820 | INFO     | .. there are 24 such processes running
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | CRITICAL | thread 'MainThread' is not alive
[2025-12-17 06:23:06] 2025-12-17 11:23:04,821 | INFO     | [monitor] control thread has ended
[2025-12-17 06:23:06] 2025-12-17 11:23:05,088 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:23:06] 2025-12-17 11:23:05,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:23:06] 2025-12-17 11:23:05,151 [wrapper] pilotpid: 2564789
[2025-12-17 06:23:06] 2025-12-17 11:23:05,156 [wrapper] Pilot exit status: 0
[2025-12-17 06:23:06] 2025-12-17 11:23:05,242 [wrapper] pandaids: 6931484498
[2025-12-17 06:23:06] 2025-12-17 11:23:05,456 [wrapper] cleanup supervisor_pilot 4118775 2564790
[2025-12-17 06:23:06] 2025-12-17 11:23:05,467 [wrapper] Test setup, not cleaning
[2025-12-17 06:23:06] 2025-12-17 11:23:05,480 [wrapper] apfmon messages muted
[2025-12-17 06:23:06] 2025-12-17 11:23:05,491 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:23:06] 2025-12-17 11:23:05,501 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:23:06]  *** Error codes and diagnostics ***
[2025-12-17 06:23:06]     "exeErrorCode": 0,
[2025-12-17 06:23:06]     "exeErrorDiag": "",
[2025-12-17 06:23:06]     "pilotErrorCode": 0,
[2025-12-17 06:23:06]     "pilotErrorDiag": "",
[2025-12-17 06:23:06]  *** Listing of results directory ***
[2025-12-17 06:23:06] total 406788
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 10:02 pilot3.tar.gz
[2025-12-17 06:23:06] -rwx------. 1 boincer umatlas     36322 Dec 16 10:05 runpilot2-wrapper.sh
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 10:07 queuedata.json
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas       100 Dec 16 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:23:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 22:07 run_atlas
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas       105 Dec 16 22:07 job.xml
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas 203403107 Dec 16 22:07 EVNT.47905855._000006.pool.root.1
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 22:07 start_atlas.sh
[2025-12-17 06:23:06] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 22:07 shared
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas    592372 Dec 16 22:07 input.tar.gz
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas         0 Dec 16 22:07 boinc_lockfile
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas      2475 Dec 16 22:07 pandaJob.out
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas        57 Dec 16 22:07 setup.sh.local
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas    987409 Dec 16 22:08 agis_schedconf.cvmfs.json
[2025-12-17 06:23:06] drwx------. 5 boincer umatlas      4096 Dec 16 22:08 pilot3
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas      6878 Dec 17 06:19 init_data.xml
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas 200933080 Dec 17 06:20 HITS.47905857._000138.pool.root.1
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas       531 Dec 17 06:20 boinc_task_state.xml
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas      1045 Dec 17 06:21 memory_monitor_summary.json
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas   1516240 Dec 17 06:21 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas    639411 Dec 17 06:21 log.47905857._000138.job.log.tgz.1
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas        95 Dec 17 06:22 pilot_heartbeat.json
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas      7820 Dec 17 06:22 heartbeat.json
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas        28 Dec 17 06:22 wrapper_checkpoint.txt
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas       893 Dec 17 06:23 pilotlog.txt
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas   3513267 Dec 17 06:23 log.47905857._000138.job.log.1
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas       357 Dec 17 06:23 output.list
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas       620 Dec 17 06:23 runtime_log
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas   4167680 Dec 17 06:23 result.tar.gz
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 06:23 boinc_mmap_file
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas       659 Dec 17 06:23 YJjLDmfnlp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZqVKDm1y2Wlm.diag
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 06:23 runtime_log.err
[2025-12-17 06:23:06] -rw-r--r--. 1 boincer umatlas     21397 Dec 17 06:23 stderr.txt
[2025-12-17 06:23:06] HITS file was successfully produced:
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas 200933080 Dec 17 06:20 shared/HITS.pool.root.1
[2025-12-17 06:23:06]  *** Contents of shared directory: ***
[2025-12-17 06:23:06] total 399536
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas 203403107 Dec 16 22:07 ATLAS.root_0
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 22:07 start_atlas.sh
[2025-12-17 06:23:06] -rw-r--r--. 2 boincer umatlas    592372 Dec 16 22:07 input.tar.gz
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas 200933080 Dec 17 06:20 HITS.pool.root.1
[2025-12-17 06:23:06] -rw-------. 1 boincer umatlas   4167680 Dec 17 06:23 result.tar.gz
06:23:28 (2557076): run_atlas exited; CPU time 70433.046160
06:23:28 (2557076): called boinc_finish(0)

</stderr_txt>
]]>

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