Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:38 (1621911): wrapper (7.7.26015): starting
00:02:38 (1621911): wrapper: running run_atlas (--nthreads 12)
[2025-12-17 00:02:38] Arguments: --nthreads 12
[2025-12-17 00:02:38] Threads: 12
[2025-12-17 00:02:38] Checking for CVMFS
[2025-12-17 00:02:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 00:02:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 00:02:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 00:02:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 00:02:40] 2.13.3.0 5308 38230 368320 154099 3 978 17182870 32935936 17502 16776704 0 106105836 99.339 208305099 40605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-17 00:02:40] CVMFS is ok
[2025-12-17 00:02:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 00:02:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 00:02:40] Further information can be found at the LHC@home message board.
[2025-12-17 00:02:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 00:02:40] Checking for apptainer binary...
[2025-12-17 00:02:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 00:02:40] Running /usr/bin/apptainer --version
[2025-12-17 00:02:41] apptainer version 1.4.5-2.el9
[2025-12-17 00:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 00:02:42] c6-1-24-1.aglt2.org
[2025-12-17 00:02:42] apptainer works
[2025-12-17 00:02:42] Set ATHENA_PROC_NUMBER=12
[2025-12-17 00:02:42] Set ATHENA_CORE_NUMBER=12
[2025-12-17 00:02:42] Starting ATLAS job with PandaID=6933463611
[2025-12-17 00:02:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 05:58:39]  *** The last 200 lines of the pilot log: ***
[2025-12-17 05:58:39] 2025-12-17 10:58:04,570 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 05:58:39] 2025-12-17 10:58:04,574 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2808.3547857142853
[2025-12-17 05:58:39] 2025-12-17 10:58:04,668 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6933463611/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,681 | INFO     | extracted standard info from prmon json
[2025-12-17 05:58:39] 2025-12-17 10:58:04,681 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 05:58:39] 2025-12-17 10:58:04,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 05:58:39] 2025-12-17 10:58:04,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 05:58:39] 2025-12-17 10:58:04,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 05:58:39] 2025-12-17 10:58:04,699 | INFO     | fitting pss+swap vs Time
[2025-12-17 05:58:39] 2025-12-17 10:58:04,700 | INFO     | sum of square deviations: 12843127189.028906
[2025-12-17 05:58:39] 2025-12-17 10:58:04,716 | INFO     | sum of deviations: 192234437622.17322
[2025-12-17 05:58:39] 2025-12-17 10:58:04,716 | INFO     | mean x: 1765958500.682081
[2025-12-17 05:58:39] 2025-12-17 10:58:04,716 | INFO     | mean y: 2609663.592485549
[2025-12-17 05:58:39] 2025-12-17 10:58:04,716 | INFO     | intersect: -26430052276.617157
[2025-12-17 05:58:39] 2025-12-17 10:58:04,725 | INFO     | chi2: 7.17676954058617
[2025-12-17 05:58:39] 2025-12-17 10:58:04,726 | INFO     | sum of square deviations: 12294432334.43984
[2025-12-17 05:58:39] 2025-12-17 10:58:04,728 | INFO     | sum of deviations: 261391079512.34586
[2025-12-17 05:58:39] 2025-12-17 10:58:04,728 | INFO     | mean x: 1765958348.1994135
[2025-12-17 05:58:39] 2025-12-17 10:58:04,728 | INFO     | mean y: 2628767.7302052784
[2025-12-17 05:58:39] 2025-12-17 10:58:04,728 | INFO     | intersect: -37543290104.55546
[2025-12-17 05:58:39] 2025-12-17 10:58:04,741 | INFO     | chi2: 4.953792031785908
[2025-12-17 05:58:39] 2025-12-17 10:58:04,741 | INFO     | current chi2=4.953792031785908 (change=30.9746257871156 %)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,742 | INFO     | sum of square deviations: 11761577320.571468
[2025-12-17 05:58:39] 2025-12-17 10:58:04,744 | INFO     | sum of deviations: 257398843336.57144
[2025-12-17 05:58:39] 2025-12-17 10:58:04,745 | INFO     | mean x: 1765958195.7142856
[2025-12-17 05:58:39] 2025-12-17 10:58:04,757 | INFO     | mean y: 2627625.214285714
[2025-12-17 05:58:39] 2025-12-17 10:58:04,757 | INFO     | intersect: -38644875559.801544
[2025-12-17 05:58:39] 2025-12-17 10:58:04,758 | INFO     | chi2: 4.950764170179441
[2025-12-17 05:58:39] 2025-12-17 10:58:04,758 | INFO     | current chi2=4.950764170179441 (change=0.06112209771906416 %)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,758 | INFO     | right removable region: 335
[2025-12-17 05:58:39] 2025-12-17 10:58:04,758 | INFO     | sum of square deviations: 12294182844.439835
[2025-12-17 05:58:39] 2025-12-17 10:58:04,773 | INFO     | sum of deviations: 80241726755.51906
[2025-12-17 05:58:39] 2025-12-17 10:58:04,773 | INFO     | mean x: 1765958653.1994135
[2025-12-17 05:58:39] 2025-12-17 10:58:04,773 | INFO     | mean y: 2640745.595307918
[2025-12-17 05:58:39] 2025-12-17 10:58:04,773 | INFO     | intersect: -11523425972.670446
[2025-12-17 05:58:39] 2025-12-17 10:58:04,774 | INFO     | chi2: 3.7151116270451743
[2025-12-17 05:58:39] 2025-12-17 10:58:04,774 | INFO     | current chi2=3.7151116270451743 (change=48.23420752142839 %)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,774 | INFO     | sum of square deviations: 11761120064.57146
[2025-12-17 05:58:39] 2025-12-17 10:58:04,789 | INFO     | sum of deviations: 23623388028.2856
[2025-12-17 05:58:39] 2025-12-17 10:58:04,789 | INFO     | mean x: 1765958805.7142856
[2025-12-17 05:58:39] 2025-12-17 10:58:04,789 | INFO     | mean y: 2656914.5654761903
[2025-12-17 05:58:39] 2025-12-17 10:58:04,789 | INFO     | intersect: -3544448282.925462
[2025-12-17 05:58:39] 2025-12-17 10:58:04,790 | INFO     | chi2: 2.8497599803164677
[2025-12-17 05:58:39] 2025-12-17 10:58:04,790 | INFO     | current chi2=2.8497599803164677 (change=23.292749548335017 %)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,790 | INFO     | left removable region: 20
[2025-12-17 05:58:39] 2025-12-17 10:58:04,790 | INFO     | sum of square deviations: 9690748686.971447
[2025-12-17 05:58:39] 2025-12-17 10:58:04,793 | INFO     | sum of deviations: 37160374049.152374
[2025-12-17 05:58:39] 2025-12-17 10:58:04,805 | INFO     | mean x: 1765958775.2761905
[2025-12-17 05:58:39] 2025-12-17 10:58:04,805 | INFO     | mean y: 2694131.1936507937
[2025-12-17 05:58:39] 2025-12-17 10:58:04,805 | INFO     | intersect: -6769093143.908514
[2025-12-17 05:58:39] 2025-12-17 10:58:04,806 | INFO     | chi2: 0.1670847667100563
[2025-12-17 05:58:39] 2025-12-17 10:58:04,806 | INFO     | current memory leak: 3.83 B/s (using 315 data points, chi2=0.17)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | could have reported an average CPU frequency of 2868 MHz (15 samples)
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | ..............................
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . Timing measurements:
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . get job = 0 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . initial setup = 3 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . payload setup = 45 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . stage-in = 0 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . payload execution = 21095 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . stage-out = 9 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | . log creation = 2 s
[2025-12-17 05:58:39] 2025-12-17 10:58:04,807 | INFO     | ..............................
[2025-12-17 05:58:39] 2025-12-17 10:58:05,320 | INFO     | 
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | job summary report
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | --------------------------------------------------
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | PanDA job id: 6933463611
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | task id: 47899042
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | errors: (none)
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | pilot state: finished 
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | transexitcode: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | exeerrorcode: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | exeerrordiag: 
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | exitcode: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:05,321 | INFO     | exitmsg: OK
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | cpuconsumptiontime: 40658 s
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | nevents: 400
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | neventsw: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | pid: 1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | pgrp: 1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | corecount: 12
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | event service: False
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | sizes: {0: 2283939, 11: 2283939, 23: 2283967, 28: 2284257, 35: 2284285, 21145: 2317848, 21156: 2326846, 21157: 2326902, 21190: 2327096}
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | --------------------------------------------------
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | 
[2025-12-17 05:58:39] 2025-12-17 10:58:05,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 05:58:39] 2025-12-17 10:58:05,413 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 05:58:39] 2025-12-17 10:58:05,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 05:58:39] 2025-12-17 10:58:05,415 | INFO     | job 6933463611 has completed (purged errors)
[2025-12-17 05:58:39] 2025-12-17 10:58:05,415 | INFO     | overall cleanup function is called
[2025-12-17 05:58:39] 2025-12-17 10:58:06,444 | INFO     | --- collectZombieJob: --- 10, [1647527]
[2025-12-17 05:58:39] 2025-12-17 10:58:06,444 | INFO     | zombie collector waiting for pid 1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:06,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 05:58:39] 2025-12-17 10:58:06,444 | INFO     | collected zombie processes
[2025-12-17 05:58:39] 2025-12-17 10:58:06,444 | INFO     | will attempt to kill all subprocesses of pid=1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:07,484 | INFO     | process IDs to be killed: [1647527] (in reverse order)
[2025-12-17 05:58:39] 2025-12-17 10:58:08,110 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 05:58:39] 2025-12-17 10:58:08,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 05:58:39] 2025-12-17 10:58:08,137 | INFO     | did not find any defunct processes belonging to 1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:08,161 | INFO     | did not find any defunct processes belonging to 1647527
[2025-12-17 05:58:39] 2025-12-17 10:58:08,161 | INFO     | ready for new job
[2025-12-17 05:58:39] 2025-12-17 10:58:08,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 05:58:39] 2025-12-17 10:58:08,168 | INFO     | ***************************************
[2025-12-17 05:58:39] 2025-12-17 10:58:08,168 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 05:58:39] 2025-12-17 10:58:08,168 | INFO     | ***************************************
[2025-12-17 05:58:39] 2025-12-17 10:58:08,168 | INFO     | 
[2025-12-17 05:58:39] 2025-12-17 10:58:08,175 | INFO     | architecture information:
[2025-12-17 05:58:39] 2025-12-17 10:58:08,180 | INFO     | executing command: cat /etc/os-release
[2025-12-17 05:58:39] 2025-12-17 10:58:08,223 | INFO     | cat /etc/os-release:
[2025-12-17 05:58:39] NAME="CentOS Linux"
[2025-12-17 05:58:39] VERSION="7 (Core)"
[2025-12-17 05:58:39] ID="centos"
[2025-12-17 05:58:39] ID_LIKE="rhel fedora"
[2025-12-17 05:58:39] VERSION_ID="7"
[2025-12-17 05:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 05:58:39] ANSI_COLOR="0;31"
[2025-12-17 05:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 05:58:39] HOME_URL="https://www.centos.org/"
[2025-12-17 05:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 05:58:39] 
[2025-12-17 05:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 05:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 05:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 05:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 05:58:39] 
[2025-12-17 05:58:39] 2025-12-17 10:58:08,223 | INFO     | ***************************************
[2025-12-17 05:58:39] 2025-12-17 10:58:08,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 05:58:39] 2025-12-17 10:58:08,832 | INFO     | sufficient remaining disk space (75571920896 B)
[2025-12-17 05:58:39] 2025-12-17 10:58:08,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 05:58:39] 2025-12-17 10:58:08,833 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 05:58:39] 2025-12-17 10:58:08,833 | INFO     | update_server=False
[2025-12-17 05:58:39] 2025-12-17 10:58:08,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 05:58:39] 2025-12-17 10:58:09,029 | INFO     | all data control threads have been joined
[2025-12-17 05:58:39] 2025-12-17 10:58:09,081 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 05:58:39] 2025-12-17 10:58:09,081 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 05:58:39] 2025-12-17 10:58:09,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:58:39] 2025-12-17 10:58:09,081 | INFO     | will abort loop
[2025-12-17 05:58:39] 2025-12-17 10:58:09,286 | INFO     | all job control threads have been joined
[2025-12-17 05:58:39] 2025-12-17 10:58:09,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 05:58:39] 2025-12-17 10:58:09,837 | INFO     | all payload control threads have been joined
[2025-12-17 05:58:39] 2025-12-17 10:58:09,839 | INFO     | [job] retrieve thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,035 | INFO     | [data] control thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,087 | INFO     | [job] job monitor thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 05:58:39] 2025-12-17 10:58:10,300 | INFO     | [job] control thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 05:58:39] 2025-12-17 10:58:10,407 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,407 | INFO     | [data] copytool_in thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,843 | INFO     | [payload] control thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,925 | INFO     | [payload] validate_post thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:10,952 | INFO     | [payload] failed_post thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,306 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,325 | INFO     | [job] validate thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,325 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,371 | INFO     | [job] queue monitor thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:11,432 | INFO     | [data] copytool_out thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:14,258 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 05:58:39] 2025-12-17 10:58:24,076 | INFO     | [monitor] cgroup control has ended
[2025-12-17 05:58:39] 2025-12-17 10:58:26,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052828321600)>', '<ExcThread(monitor, started 140051962914560)>']
[2025-12-17 05:58:39] 2025-12-17 10:58:31,070 | INFO     | all workflow threads have been joined
[2025-12-17 05:58:39] 2025-12-17 10:58:31,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 05:58:39] 2025-12-17 10:58:31,070 | INFO     | traces error code: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:31,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 05:58:39] 2025-12-17 10:58:38,865 | INFO     | PID=1628898 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 05:58:39] 2025-12-17 10:58:38,867 | INFO     | .. there are 17 such processes running
[2025-12-17 05:58:39] 2025-12-17 10:58:38,867 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 05:58:39] 2025-12-17 10:58:38,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 05:58:39] 2025-12-17 10:58:38,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 05:58:39] 2025-12-17 10:58:38,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 05:58:39] 2025-12-17 10:58:38,868 | INFO     | [monitor] control thread has ended
[2025-12-17 05:58:39] 2025-12-17 10:58:39,030 [wrapper] ==== pilot stdout END ====
[2025-12-17 05:58:39] 2025-12-17 10:58:39,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 05:58:39] 2025-12-17 10:58:39,132 [wrapper] pilotpid: 1628898
[2025-12-17 05:58:39] 2025-12-17 10:58:39,162 [wrapper] Pilot exit status: 0
[2025-12-17 05:58:39] 2025-12-17 10:58:39,245 [wrapper] pandaids: 6933463611
[2025-12-17 05:58:39] 2025-12-17 10:58:39,326 [wrapper] cleanup supervisor_pilot 2525493 1628899
[2025-12-17 05:58:39] 2025-12-17 10:58:39,329 [wrapper] Test setup, not cleaning
[2025-12-17 05:58:39] 2025-12-17 10:58:39,334 [wrapper] apfmon messages muted
[2025-12-17 05:58:39] 2025-12-17 10:58:39,348 [wrapper] ==== wrapper stdout END ====
[2025-12-17 05:58:39] 2025-12-17 10:58:39,373 [wrapper] ==== wrapper stderr END ====
[2025-12-17 05:58:39]  *** Error codes and diagnostics ***
[2025-12-17 05:58:39]     "exeErrorCode": 0,
[2025-12-17 05:58:39]     "exeErrorDiag": "",
[2025-12-17 05:58:39]     "pilotErrorCode": 0,
[2025-12-17 05:58:39]     "pilotErrorDiag": "",
[2025-12-17 05:58:39]  *** Listing of results directory ***
[2025-12-17 05:58:39] total 376732
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-17 05:58:39] -rwx------. 1 boincer umatlas     36322 Dec 16 15:08 runpilot2-wrapper.sh
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 15:08 queuedata.json
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas       100 Dec 17 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 05:58:39] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 17 00:02 run_atlas
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas       105 Dec 17 00:02 job.xml
[2025-12-17 05:58:39] -rw-r--r--. 2 boincer umatlas 196210035 Dec 17 00:02 EVNT.47899040._000147.pool.root.1
[2025-12-17 05:58:39] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:02 start_atlas.sh
[2025-12-17 05:58:39] drwxrwx--x. 2 boincer umatlas      4096 Dec 17 00:02 shared
[2025-12-17 05:58:39] -rw-r--r--. 2 boincer umatlas    592391 Dec 17 00:02 input.tar.gz
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas         0 Dec 17 00:02 boinc_lockfile
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas      2495 Dec 17 00:02 pandaJob.out
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas        57 Dec 17 00:02 setup.sh.local
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas    987409 Dec 17 00:03 agis_schedconf.cvmfs.json
[2025-12-17 05:58:39] drwx------. 5 boincer umatlas      4096 Dec 17 00:03 pilot3
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas 179317309 Dec 17 05:54 HITS.47899042._003832.pool.root.1
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas       531 Dec 17 05:54 boinc_task_state.xml
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas      6843 Dec 17 05:56 init_data.xml
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas      1041 Dec 17 05:57 memory_monitor_summary.json
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas   1516240 Dec 17 05:57 agis_ddmendpoints.agis.ALL.json
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas    608313 Dec 17 05:57 log.47899042._003832.job.log.tgz.1
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas        95 Dec 17 05:57 pilot_heartbeat.json
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas      7821 Dec 17 05:58 heartbeat.json
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas        28 Dec 17 05:58 wrapper_checkpoint.txt
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 05:58 boinc_mmap_file
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas       823 Dec 17 05:58 pilotlog.txt
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas   2557417 Dec 17 05:58 log.47899042._003832.job.log.1
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas       357 Dec 17 05:58 output.list
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas       620 Dec 17 05:58 runtime_log
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas   3184640 Dec 17 05:58 result.tar.gz
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas      9350 Dec 17 05:58 runtime_log.err
[2025-12-17 05:58:39] -rw-------. 1 boincer umatlas       657 Dec 17 05:58 hTHKDmFWqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1BWKDmtqxham.diag
[2025-12-17 05:58:39] -rw-r--r--. 1 boincer umatlas     21194 Dec 17 05:58 stderr.txt
[2025-12-17 05:58:40] HITS file was successfully produced:
[2025-12-17 05:58:40] -rw-------. 1 boincer umatlas 179317309 Dec 17 05:54 shared/HITS.pool.root.1
[2025-12-17 05:58:40]  *** Contents of shared directory: ***
[2025-12-17 05:58:40] total 370444
[2025-12-17 05:58:40] -rw-r--r--. 2 boincer umatlas 196210035 Dec 17 00:02 ATLAS.root_0
[2025-12-17 05:58:40] -rw-r--r--. 2 boincer umatlas     15847 Dec 17 00:02 start_atlas.sh
[2025-12-17 05:58:40] -rw-r--r--. 2 boincer umatlas    592391 Dec 17 00:02 input.tar.gz
[2025-12-17 05:58:40] -rw-------. 1 boincer umatlas 179317309 Dec 17 05:54 HITS.pool.root.1
[2025-12-17 05:58:40] -rw-------. 1 boincer umatlas   3184640 Dec 17 05:58 result.tar.gz
05:58:41 (1621911): run_atlas exited; CPU time 41242.439733
05:58:41 (1621911): called boinc_finish(0)

</stderr_txt>
]]>

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