Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:12:19 (2382374): wrapper (7.7.26015): starting
21:12:19 (2382374): wrapper: running run_atlas (--nthreads 9)
[2025-12-16 21:12:19] Arguments: --nthreads 9
[2025-12-16 21:12:19] Threads: 9
[2025-12-16 21:12:19] Checking for CVMFS
[2025-12-16 21:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:12:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:12:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:12:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:12:21] 2.13.3.0 11830 59539 397232 154094 0 639 30504381 32935937 28508 16776704 0 320459667 99.498 405707585 32468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 21:12:21] CVMFS is ok
[2025-12-16 21:12:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:12:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:12:21] Further information can be found at the LHC@home message board.
[2025-12-16 21:12:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:12:21] Checking for apptainer binary...
[2025-12-16 21:12:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:12:21] Running /usr/bin/apptainer --version
[2025-12-16 21:12:21] apptainer version 1.4.5-2.el9
[2025-12-16 21:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:12:22] c6-8-25-1.aglt2.org
[2025-12-16 21:12:22] apptainer works
[2025-12-16 21:12:22] Set ATHENA_PROC_NUMBER=9
[2025-12-16 21:12:22] Set ATHENA_CORE_NUMBER=9
[2025-12-16 21:12:22] Starting ATLAS job with PandaID=6931598960
[2025-12-16 21:12:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 01:34:59]  *** The last 200 lines of the pilot log: ***
[2025-12-17 01:34:59] 2025-12-17 06:33:52,389 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2500.2881354166666
[2025-12-17 01:34:59] 2025-12-17 06:33:52,524 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931598960/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,525 | INFO     | extracted standard info from prmon json
[2025-12-17 01:34:59] 2025-12-17 06:33:52,525 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 01:34:59] 2025-12-17 06:33:52,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 01:34:59] 2025-12-17 06:33:52,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 01:34:59] 2025-12-17 06:33:52,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 01:34:59] 2025-12-17 06:33:52,572 | INFO     | fitting pss+swap vs Time
[2025-12-17 01:34:59] 2025-12-17 06:33:52,572 | INFO     | sum of square deviations: 5081555216.72442
[2025-12-17 01:34:59] 2025-12-17 06:33:52,592 | INFO     | monitor loop #937: job 0:6931598960 is in state 'finished'
[2025-12-17 01:34:59] 2025-12-17 06:33:52,593 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,615 | INFO     | sum of deviations: -16877698585.7953
[2025-12-17 01:34:59] 2025-12-17 06:33:52,616 | INFO     | mean x: 1765945455.070866
[2025-12-17 01:34:59] 2025-12-17 06:33:52,616 | INFO     | mean y: 2542600.933070866
[2025-12-17 01:34:59] 2025-12-17 06:33:52,616 | INFO     | intersect: 5867891660.123973
[2025-12-17 01:34:59] 2025-12-17 06:33:52,616 | INFO     | chi2: 4.419888825827579
[2025-12-17 01:34:59] 2025-12-17 06:33:52,617 | INFO     | sum of square deviations: 4787374022.722909
[2025-12-17 01:34:59] 2025-12-17 06:33:52,619 | INFO     | sum of deviations: 17345745687.662663
[2025-12-17 01:34:59] 2025-12-17 06:33:52,619 | INFO     | mean x: 1765945302.5783134
[2025-12-17 01:34:59] 2025-12-17 06:33:52,619 | INFO     | mean y: 2560133.5301204817
[2025-12-17 01:34:59] 2025-12-17 06:33:52,619 | INFO     | intersect: -6395861625.759034
[2025-12-17 01:34:59] 2025-12-17 06:33:52,620 | INFO     | chi2: 2.9201611325028987
[2025-12-17 01:34:59] 2025-12-17 06:33:52,620 | INFO     | current chi2=2.9201611325028987 (change=33.93134425827717 %)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,620 | INFO     | sum of square deviations: 4504666381.196712
[2025-12-17 01:34:59] 2025-12-17 06:33:52,629 | INFO     | sum of deviations: 17009642577.532745
[2025-12-17 01:34:59] 2025-12-17 06:33:52,629 | INFO     | mean x: 1765945150.057377
[2025-12-17 01:34:59] 2025-12-17 06:33:52,629 | INFO     | mean y: 2559952.176229508
[2025-12-17 01:34:59] 2025-12-17 06:33:52,630 | INFO     | intersect: -6665657685.291405
[2025-12-17 01:34:59] 2025-12-17 06:33:52,630 | INFO     | chi2: 2.9214910905612843
[2025-12-17 01:34:59] 2025-12-17 06:33:52,630 | INFO     | current chi2=2.9214910905612843 (change=-0.045543995623478814 %)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,630 | INFO     | right removable region: 243
[2025-12-17 01:34:59] 2025-12-17 06:33:52,631 | INFO     | sum of square deviations: 4787300822.562268
[2025-12-17 01:34:59] 2025-12-17 06:33:52,653 | INFO     | sum of deviations: -80300081957.82332
[2025-12-17 01:34:59] 2025-12-17 06:33:52,653 | INFO     | mean x: 1765945607.5823293
[2025-12-17 01:34:59] 2025-12-17 06:33:52,653 | INFO     | mean y: 2575329.0401606425
[2025-12-17 01:34:59] 2025-12-17 06:33:52,653 | INFO     | intersect: 29623771547.501675
[2025-12-17 01:34:59] 2025-12-17 06:33:52,653 | INFO     | chi2: 1.8828402228989287
[2025-12-17 01:34:59] 2025-12-17 06:33:52,654 | INFO     | current chi2=1.8828402228989287 (change=57.40073343255674 %)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,654 | INFO     | sum of square deviations: 4504628040.831966
[2025-12-17 01:34:59] 2025-12-17 06:33:52,678 | INFO     | sum of deviations: -90662016527.34833
[2025-12-17 01:34:59] 2025-12-17 06:33:52,679 | INFO     | mean x: 1765945760.0942624
[2025-12-17 01:34:59] 2025-12-17 06:33:52,679 | INFO     | mean y: 2580891.5368852457
[2025-12-17 01:34:59] 2025-12-17 06:33:52,679 | INFO     | intersect: 35544739364.29213
[2025-12-17 01:34:59] 2025-12-17 06:33:52,679 | INFO     | chi2: 1.7727667300100793
[2025-12-17 01:34:59] 2025-12-17 06:33:52,680 | INFO     | current chi2=1.7727667300100793 (change=5.8461409284837735 %)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,680 | INFO     | left removable region: 20
[2025-12-17 01:34:59] 2025-12-17 06:33:52,680 | INFO     | sum of square deviations: 3438777446.215225
[2025-12-17 01:34:59] 2025-12-17 06:33:52,693 | INFO     | sum of deviations: -43190461170.47986
[2025-12-17 01:34:59] 2025-12-17 06:33:52,715 | INFO     | mean x: 1765945729.5829597
[2025-12-17 01:34:59] 2025-12-17 06:33:52,716 | INFO     | mean y: 2593320.2421524664
[2025-12-17 01:34:59] 2025-12-17 06:33:52,716 | INFO     | intersect: 22182572006.177113
[2025-12-17 01:34:59] 2025-12-17 06:33:52,716 | INFO     | chi2: 0.19228601236164253
[2025-12-17 01:34:59] 2025-12-17 06:33:52,717 | INFO     | current memory leak: -12.56 B/s (using 223 data points, chi2=0.19)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,717 | INFO     | could have reported an average CPU frequency of 2553 MHz (12 samples)
[2025-12-17 01:34:59] 2025-12-17 06:33:52,717 | INFO     | ..............................
[2025-12-17 01:34:59] 2025-12-17 06:33:52,717 | INFO     | . Timing measurements:
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . get job = 0 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . initial setup = 5 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . payload setup = 43 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . stage-in = 0 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . payload execution = 15472 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . stage-out = 5 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | . log creation = 0 s
[2025-12-17 01:34:59] 2025-12-17 06:33:52,718 | INFO     | ..............................
[2025-12-17 01:34:59] 2025-12-17 06:33:53,091 | INFO     | time since job start (15629s) is within the limit (174528.0s)
[2025-12-17 01:34:59] 2025-12-17 06:33:53,545 | INFO     | 
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | job summary report
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | --------------------------------------------------
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | PanDA job id: 6931598960
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | task id: 47898763
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | errors: (none)
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | pilot state: finished 
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | transexitcode: 0
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | exeerrorcode: 0
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | exeerrordiag: 
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | exitcode: 0
[2025-12-17 01:34:59] 2025-12-17 06:33:53,546 | INFO     | exitmsg: OK
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | cpuconsumptiontime: 58955 s
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | nevents: 400
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | neventsw: 0
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | pid: 2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | pgrp: 2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | corecount: 9
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | event service: False
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | sizes: {0: 2283787, 1: 2283986, 13: 2283986, 23: 2284042, 32: 2284332, 34: 2284360, 15520: 2315464, 15521: 2315463, 15527: 2324517, 15531: 2324573, 15567: 2324767}
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | --------------------------------------------------
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | 
[2025-12-17 01:34:59] 2025-12-17 06:33:53,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 01:34:59] 2025-12-17 06:33:53,682 | INFO     | job 6931598960 has completed (purged errors)
[2025-12-17 01:34:59] 2025-12-17 06:33:53,683 | INFO     | overall cleanup function is called
[2025-12-17 01:34:59] 2025-12-17 06:33:54,696 | INFO     | --- collectZombieJob: --- 10, [2396737]
[2025-12-17 01:34:59] 2025-12-17 06:33:54,697 | INFO     | zombie collector waiting for pid 2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:54,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 01:34:59] 2025-12-17 06:33:54,697 | INFO     | collected zombie processes
[2025-12-17 01:34:59] 2025-12-17 06:33:54,697 | INFO     | will attempt to kill all subprocesses of pid=2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:56,916 | INFO     | process IDs to be killed: [2396737] (in reverse order)
[2025-12-17 01:34:59] 2025-12-17 06:33:57,272 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 01:34:59] 2025-12-17 06:33:57,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 01:34:59] 2025-12-17 06:33:57,365 | INFO     | did not find any defunct processes belonging to 2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:57,485 | INFO     | did not find any defunct processes belonging to 2396737
[2025-12-17 01:34:59] 2025-12-17 06:33:57,486 | INFO     | ready for new job
[2025-12-17 01:34:59] 2025-12-17 06:33:57,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 01:34:59] 2025-12-17 06:33:57,488 | INFO     | ***************************************
[2025-12-17 01:34:59] 2025-12-17 06:33:57,508 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 01:34:59] 2025-12-17 06:33:57,509 | INFO     | ***************************************
[2025-12-17 01:34:59] 2025-12-17 06:33:57,509 | INFO     | 
[2025-12-17 01:34:59] 2025-12-17 06:33:57,518 | INFO     | architecture information:
[2025-12-17 01:34:59] 2025-12-17 06:33:57,522 | INFO     | executing command: cat /etc/os-release
[2025-12-17 01:34:59] 2025-12-17 06:33:57,563 | INFO     | cat /etc/os-release:
[2025-12-17 01:34:59] NAME="CentOS Linux"
[2025-12-17 01:34:59] VERSION="7 (Core)"
[2025-12-17 01:34:59] ID="centos"
[2025-12-17 01:34:59] ID_LIKE="rhel fedora"
[2025-12-17 01:34:59] VERSION_ID="7"
[2025-12-17 01:34:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 01:34:59] ANSI_COLOR="0;31"
[2025-12-17 01:34:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 01:34:59] HOME_URL="https://www.centos.org/"
[2025-12-17 01:34:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 01:34:59] 
[2025-12-17 01:34:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 01:34:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 01:34:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 01:34:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 01:34:59] 
[2025-12-17 01:34:59] 2025-12-17 06:33:57,565 | INFO     | ***************************************
[2025-12-17 01:34:59] 2025-12-17 06:33:58,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-17 01:34:59] 2025-12-17 06:33:58,122 | INFO     | sufficient remaining disk space (74252812288 B)
[2025-12-17 01:34:59] 2025-12-17 06:33:58,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 01:34:59] 2025-12-17 06:33:58,122 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 01:34:59] 2025-12-17 06:33:58,122 | INFO     | update_server=False
[2025-12-17 01:34:59] 2025-12-17 06:33:58,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 01:34:59] 2025-12-17 06:33:58,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 01:34:59] 2025-12-17 06:33:58,188 | INFO     | all data control threads have been joined
[2025-12-17 01:34:59] 2025-12-17 06:33:58,410 | INFO     | all job control threads have been joined
[2025-12-17 01:34:59] 2025-12-17 06:33:58,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:34:59] 2025-12-17 06:33:58,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 01:34:59] 2025-12-17 06:33:58,714 | INFO     | aborting loop
[2025-12-17 01:34:59] 2025-12-17 06:33:59,128 | INFO     | [job] retrieve thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,210 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,213 | INFO     | [data] control thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,416 | INFO     | [job] control thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,565 | INFO     | [job] queue monitor thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,572 | INFO     | [payload] validate_post thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,612 | INFO     | all payload control threads have been joined
[2025-12-17 01:34:59] 2025-12-17 06:33:59,704 | INFO     | [job] validate thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,705 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,706 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:33:59,719 | INFO     | [job] job monitor thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:00,047 | INFO     | [data] copytool_in thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:00,130 | INFO     | [data] copytool_out thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:00,416 | INFO     | [payload] failed_post thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:00,618 | INFO     | [payload] control thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:00,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 01:34:59] 2025-12-17 06:34:04,927 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 01:34:59] 2025-12-17 06:34:30,339 | INFO     | PID=2388819 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 01:34:59] 2025-12-17 06:34:30,341 | INFO     | .. there are 25 such processes running
[2025-12-17 01:34:59] 2025-12-17 06:34:30,342 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 01:34:59] 2025-12-17 06:34:30,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 01:34:59] 2025-12-17 06:34:30,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 01:34:59] 2025-12-17 06:34:51,305 | INFO     | [monitor] cgroup control has ended
[2025-12-17 01:34:59] 2025-12-17 06:34:52,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990632085312)>', '<ExcThread(monitor, started 139990130472704)>']
[2025-12-17 01:34:59] 2025-12-17 06:34:52,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 01:34:59] 2025-12-17 06:34:52,487 | INFO     | [monitor] control thread has ended
[2025-12-17 01:34:59] 2025-12-17 06:34:57,205 | INFO     | all workflow threads have been joined
[2025-12-17 01:34:59] 2025-12-17 06:34:57,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 01:34:59] 2025-12-17 06:34:57,206 | INFO     | traces error code: 0
[2025-12-17 01:34:59] 2025-12-17 06:34:57,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 01:34:59] 2025-12-17 06:34:58,317 [wrapper] ==== pilot stdout END ====
[2025-12-17 01:34:59] 2025-12-17 06:34:58,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 01:34:59] 2025-12-17 06:34:58,350 [wrapper] pilotpid: 2388819
[2025-12-17 01:34:59] 2025-12-17 06:34:58,409 [wrapper] Pilot exit status: 0
[2025-12-17 01:34:59] 2025-12-17 06:34:58,515 [wrapper] pandaids: 6931598960
[2025-12-17 01:34:59] 2025-12-17 06:34:58,956 [wrapper] cleanup supervisor_pilot 3246481 2388820
[2025-12-17 01:34:59] 2025-12-17 06:34:58,978 [wrapper] Test setup, not cleaning
[2025-12-17 01:34:59] 2025-12-17 06:34:59,003 [wrapper] apfmon messages muted
[2025-12-17 01:34:59] 2025-12-17 06:34:59,018 [wrapper] ==== wrapper stdout END ====
[2025-12-17 01:34:59] 2025-12-17 06:34:59,030 [wrapper] ==== wrapper stderr END ====
[2025-12-17 01:34:59]  *** Error codes and diagnostics ***
[2025-12-17 01:34:59]     "exeErrorCode": 0,
[2025-12-17 01:34:59]     "exeErrorDiag": "",
[2025-12-17 01:34:59]     "pilotErrorCode": 0,
[2025-12-17 01:34:59]     "pilotErrorDiag": "",
[2025-12-17 01:34:59]  *** Listing of results directory ***
[2025-12-17 01:34:59] total 433792
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-17 01:34:59] -rwx------. 1 boincer umatlas     36322 Dec 16 15:05 runpilot2-wrapper.sh
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 15:06 queuedata.json
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas       100 Dec 16 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 01:34:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 21:12 run_atlas
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas       105 Dec 16 21:12 job.xml
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas 221884178 Dec 16 21:12 EVNT.47898761._000792.pool.root.1
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:12 start_atlas.sh
[2025-12-17 01:34:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 21:12 shared
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 21:12 input.tar.gz
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas         0 Dec 16 21:12 boinc_lockfile
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas      2508 Dec 16 21:12 pandaJob.out
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas        57 Dec 16 21:12 setup.sh.local
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas    987393 Dec 16 21:13 agis_schedconf.cvmfs.json
[2025-12-17 01:34:59] drwx------. 5 boincer umatlas      4096 Dec 16 21:13 pilot3
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas      6877 Dec 17 01:30 init_data.xml
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas 213569736 Dec 17 01:31 HITS.47898763._020400.pool.root.1
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas       531 Dec 17 01:31 boinc_task_state.xml
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas      1052 Dec 17 01:33 memory_monitor_summary.json
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas   1516240 Dec 17 01:33 agis_ddmendpoints.agis.ALL.json
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas    480813 Dec 17 01:33 log.47898763._020400.job.log.tgz.1
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas      7840 Dec 17 01:33 heartbeat.json
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas        95 Dec 17 01:34 pilot_heartbeat.json
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 01:34 boinc_mmap_file
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas        28 Dec 17 01:34 wrapper_checkpoint.txt
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas      4824 Dec 17 01:34 pilotlog.txt
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas   1933064 Dec 17 01:34 log.47898763._020400.job.log.1
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas       357 Dec 17 01:34 output.list
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas       620 Dec 17 01:34 runtime_log
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas   2437120 Dec 17 01:34 result.tar.gz
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas       659 Dec 17 01:34 sifLDmAUqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg9VKDm0DTiKo.diag
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 01:34 runtime_log.err
[2025-12-17 01:34:59] -rw-r--r--. 1 boincer umatlas     21274 Dec 17 01:34 stderr.txt
[2025-12-17 01:34:59] HITS file was successfully produced:
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas 213569736 Dec 17 01:31 shared/HITS.pool.root.1
[2025-12-17 01:34:59]  *** Contents of shared directory: ***
[2025-12-17 01:34:59] total 428236
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas 221884178 Dec 16 21:12 ATLAS.root_0
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:12 start_atlas.sh
[2025-12-17 01:34:59] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 21:12 input.tar.gz
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas 213569736 Dec 17 01:31 HITS.pool.root.1
[2025-12-17 01:34:59] -rw-------. 1 boincer umatlas   2437120 Dec 17 01:34 result.tar.gz
01:35:00 (2382374): run_atlas exited; CPU time 59673.216783
01:35:00 (2382374): called boinc_finish(0)

</stderr_txt>
]]>

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