Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:06 (23116): wrapper (7.7.26015): starting
20:16:06 (23116): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 20:16:06] Arguments: --nthreads 12
[2025-12-16 20:16:06] Threads: 12
[2025-12-16 20:16:06] Checking for CVMFS
[2025-12-16 20:16:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:16:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:16:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:16:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:16:06] 2.11.2.0 2998 132962 100756 154093 3 57 13414802 20275201 1 130560 0 57080263 99.957 5863286 35532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 20:16:06] CVMFS is ok
[2025-12-16 20:16:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:16:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:16:06] Further information can be found at the LHC@home message board.
[2025-12-16 20:16:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:16:06] Checking for apptainer binary...
[2025-12-16 20:16:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:16:06] Running /usr/bin/apptainer --version
[2025-12-16 20:16:07] apptainer version 1.3.2-1.el7
[2025-12-16 20:16:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:16:08] c-205-12.aglt2.org
[2025-12-16 20:16:08] apptainer works
[2025-12-16 20:16:08] Set ATHENA_PROC_NUMBER=12
[2025-12-16 20:16:08] Set ATHENA_CORE_NUMBER=12
[2025-12-16 20:16:08] Starting ATLAS job with PandaID=6931598834
[2025-12-16 20:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 21:55:38]  *** The last 200 lines of the pilot log: ***
[2025-12-16 21:55:38]  status=None
[2025-12-16 21:55:38]  status_code=0
[2025-12-16 21:55:38]  storage_token=
[2025-12-16 21:55:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6931598834/log.47898763._020277.job.log.tgz.1
[2025-12-16 21:55:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/bb/log.47898763._020277.job.log.tgz.1
[2025-12-16 21:55:38]  workdir=None
[2025-12-16 21:55:38] ]
[2025-12-16 21:55:38] 2025-12-17 02:54:29,097 | INFO     | transferring file log.47898763._020277.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931598834/log.47898763._020277.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 21:55:38] 2025-12-17 02:54:29,097 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931598834/log.47898763._020277.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898763._020277.job
[2025-12-16 21:55:38] 2025-12-17 02:54:29,119 | INFO     | adding to output.list: log.47898763._020277.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/bb/log.47898763._020277.job.log.tg
[2025-12-16 21:55:38] 2025-12-17 02:54:29,120 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 21:55:38] 2025-12-17 02:54:29,120 | INFO     | summary of transferred files:
[2025-12-16 21:55:38] 2025-12-17 02:54:29,120 | INFO     |  -- lfn=log.47898763._020277.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 21:55:38] 2025-12-17 02:54:29,120 | INFO     | stage-out finished correctly
[2025-12-16 21:55:38] 2025-12-17 02:54:29,628 | INFO     | time since job start (5886s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:30,137 | INFO     | monitor loop #436: job 0:6931598834 is in state 'finished'
[2025-12-16 21:55:38] 2025-12-17 02:54:30,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:55:38] 2025-12-17 02:54:31,634 | INFO     | time since job start (5888s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:31,829 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 21:55:38] 2025-12-17 02:54:32,650 | INFO     | monitor loop #437: job 0:6931598834 is in state 'finished'
[2025-12-16 21:55:38] 2025-12-17 02:54:32,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:55:38] 2025-12-17 02:54:32,757 | INFO     | PID=26791 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-16 21:55:38] 2025-12-17 02:54:33,758 | INFO     | time since job start (5890s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:34,608 | INFO     | job 6931598834 has state=finished
[2025-12-16 21:55:38] 2025-12-17 02:54:34,609 | INFO     | preparing for final server update for job 6931598834 in state='finished'
[2025-12-16 21:55:38] 2025-12-17 02:54:34,609 | INFO     | this job has now completed (state=finished)
[2025-12-16 21:55:38] 2025-12-17 02:54:34,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 21:55:38] 2025-12-17 02:54:34,610 | INFO     | log transfer has been attempted: DONE
[2025-12-16 21:55:38] 2025-12-17 02:54:34,610 | INFO     | job 6931598834 has finished - writing final server update
[2025-12-16 21:55:38] 2025-12-17 02:54:34,610 | INFO     | total number of processed events: 400 (read)
[2025-12-16 21:55:38] 2025-12-17 02:54:34,611 | INFO     | executing command: lscpu
[2025-12-16 21:55:38] 2025-12-17 02:54:34,635 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 21:55:38] 2025-12-17 02:54:35,153 | INFO     | monitor loop #438: job 0:6931598834 is in state 'finished'
[2025-12-16 21:55:38] 2025-12-17 02:54:35,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:55:38] 2025-12-17 02:54:35,763 | INFO     | time since job start (5892s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:37,656 | INFO     | monitor loop #439: job 0:6931598834 is in state 'finished'
[2025-12-16 21:55:38] 2025-12-17 02:54:37,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:55:38] 2025-12-17 02:54:37,769 | INFO     | time since job start (5894s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,364 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 21:55:38] 2025-12-17 02:54:39,368 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5833333333333
[2025-12-16 21:55:38] 2025-12-17 02:54:39,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931598834/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,371 | INFO     | extracted standard info from prmon json
[2025-12-16 21:55:38] 2025-12-17 02:54:39,371 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 21:55:38] 2025-12-17 02:54:39,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 21:55:38] 2025-12-17 02:54:39,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 21:55:38] 2025-12-17 02:54:39,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 21:55:38] 2025-12-17 02:54:39,374 | INFO     | fitting pss+swap vs Time
[2025-12-16 21:55:38] 2025-12-17 02:54:39,374 | INFO     | sum of square deviations: 218571540.0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,374 | INFO     | sum of deviations: 496232682.0000005
[2025-12-16 21:55:38] 2025-12-17 02:54:39,374 | INFO     | mean x: 1765937201.0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,374 | INFO     | mean y: 2732623.033707865
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | intersect: -4006553094.108624
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | chi2: 0.045711865210777025
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | current memory leak: 2.27 B/s (using 89 data points, chi2=0.05)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | could have reported an average CPU frequency of 2137 MHz (7 samples)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | ..............................
[2025-12-16 21:55:38] 2025-12-17 02:54:39,375 | INFO     | . Timing measurements:
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . get job = 0 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . initial setup = 2 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . payload setup = 7 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . stage-in = 0 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . payload execution = 5857 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . stage-out = 0 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | . log creation = 0 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,376 | INFO     | ..............................
[2025-12-16 21:55:38] 2025-12-17 02:54:39,762 | INFO     | 
[2025-12-16 21:55:38] 2025-12-17 02:54:39,763 | INFO     | job summary report
[2025-12-16 21:55:38] 2025-12-17 02:54:39,763 | INFO     | --------------------------------------------------
[2025-12-16 21:55:38] 2025-12-17 02:54:39,763 | INFO     | PanDA job id: 6931598834
[2025-12-16 21:55:38] 2025-12-17 02:54:39,763 | INFO     | task id: 47898763
[2025-12-16 21:55:38] 2025-12-17 02:54:39,763 | INFO     | errors: (none)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | pilot state: finished 
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | transexitcode: 0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | exeerrorcode: 0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | exeerrordiag: 
[2025-12-16 21:55:38] 2025-12-17 02:54:39,764 | INFO     | exitcode: 0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | exitmsg: OK
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | cpuconsumptiontime: 65252 s
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | nevents: 400
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | neventsw: 0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | pid: 707
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | pgrp: 707
[2025-12-16 21:55:38] 2025-12-17 02:54:39,765 | INFO     | corecount: 12
[2025-12-16 21:55:38] 2025-12-17 02:54:39,766 | INFO     | event service: False
[2025-12-16 21:55:38] 2025-12-17 02:54:39,766 | INFO     | sizes: {0: 2283958, 1: 2283958, 5: 2284248, 11: 2284304, 5868: 2310997, 5869: 2319995, 5872: 2320179, 5880: 2320373}
[2025-12-16 21:55:38] 2025-12-17 02:54:39,766 | INFO     | --------------------------------------------------
[2025-12-16 21:55:38] 2025-12-17 02:54:39,766 | INFO     | 
[2025-12-16 21:55:38] 2025-12-17 02:54:39,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 21:55:38] 2025-12-17 02:54:39,775 | INFO     | time since job start (5896s) is within the limit (174528.0s)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 21:55:38] 2025-12-17 02:54:39,794 | INFO     | job 6931598834 has completed (purged errors)
[2025-12-16 21:55:38] 2025-12-17 02:54:39,794 | INFO     | overall cleanup function is called
[2025-12-16 21:55:38] 2025-12-17 02:54:40,803 | INFO     | --- collectZombieJob: --- 10, [707]
[2025-12-16 21:55:38] 2025-12-17 02:54:40,803 | INFO     | zombie collector waiting for pid 707
[2025-12-16 21:55:38] 2025-12-17 02:54:40,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 21:55:38] 2025-12-17 02:54:40,803 | INFO     | collected zombie processes
[2025-12-16 21:55:38] 2025-12-17 02:54:40,803 | INFO     | will attempt to kill all subprocesses of pid=707
[2025-12-16 21:55:38] 2025-12-17 02:54:40,896 | INFO     | process IDs to be killed: [707] (in reverse order)
[2025-12-16 21:55:38] 2025-12-17 02:54:40,949 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 21:55:38] 2025-12-17 02:54:40,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 21:55:38] 2025-12-17 02:54:40,952 | INFO     | did not find any defunct processes belonging to 707
[2025-12-16 21:55:38] 2025-12-17 02:54:40,954 | INFO     | did not find any defunct processes belonging to 707
[2025-12-16 21:55:38] 2025-12-17 02:54:40,954 | INFO     | ready for new job
[2025-12-16 21:55:38] 2025-12-17 02:54:40,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 21:55:38] 2025-12-17 02:54:40,955 | INFO     | ***************************************
[2025-12-16 21:55:38] 2025-12-17 02:54:40,956 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 21:55:38] 2025-12-17 02:54:40,956 | INFO     | ***************************************
[2025-12-16 21:55:38] 2025-12-17 02:54:40,956 | INFO     | 
[2025-12-16 21:55:38] 2025-12-17 02:54:40,956 | INFO     | architecture information:
[2025-12-16 21:55:38] 2025-12-17 02:54:40,957 | INFO     | executing command: cat /etc/os-release
[2025-12-16 21:55:38] 2025-12-17 02:54:40,972 | INFO     | cat /etc/os-release:
[2025-12-16 21:55:38] NAME="CentOS Linux"
[2025-12-16 21:55:38] VERSION="7 (Core)"
[2025-12-16 21:55:38] ID="centos"
[2025-12-16 21:55:38] ID_LIKE="rhel fedora"
[2025-12-16 21:55:38] VERSION_ID="7"
[2025-12-16 21:55:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 21:55:38] ANSI_COLOR="0;31"
[2025-12-16 21:55:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 21:55:38] HOME_URL="https://www.centos.org/"
[2025-12-16 21:55:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 21:55:38] 
[2025-12-16 21:55:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 21:55:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 21:55:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 21:55:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 21:55:38] 
[2025-12-16 21:55:38] 2025-12-17 02:54:40,972 | INFO     | ***************************************
[2025-12-16 21:55:38] 2025-12-17 02:54:41,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 21:55:38] 2025-12-17 02:54:41,492 | INFO     | sufficient remaining disk space (29304553472 B)
[2025-12-16 21:55:38] 2025-12-17 02:54:41,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 21:55:38] 2025-12-17 02:54:41,493 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 21:55:38] 2025-12-17 02:54:41,493 | INFO     | update_server=False
[2025-12-16 21:55:38] 2025-12-17 02:54:41,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 21:55:38] 2025-12-17 02:54:41,493 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-16 21:55:38] 2025-12-17 02:54:41,494 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 21:55:38] 2025-12-17 02:54:41,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:55:38] 2025-12-17 02:54:41,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 21:55:38] 2025-12-17 02:54:41,495 | INFO     | aborting loop
[2025-12-16 21:55:38] 2025-12-17 02:54:41,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 21:55:38] 2025-12-17 02:54:41,806 | INFO     | all data control threads have been joined
[2025-12-16 21:55:38] 2025-12-17 02:54:42,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 21:55:38] 2025-12-17 02:54:42,360 | INFO     | all job control threads have been joined
[2025-12-16 21:55:38] 2025-12-17 02:54:42,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 21:55:38] 2025-12-17 02:54:42,498 | INFO     | [job] retrieve thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,501 | INFO     | [job] job monitor thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,575 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,577 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,587 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,809 | INFO     | [data] control thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:42,953 | INFO     | all payload control threads have been joined
[2025-12-16 21:55:38] 2025-12-17 02:54:43,063 | INFO     | [payload] failed_post thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,095 | INFO     | [data] copytool_in thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,365 | INFO     | [job] control thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,670 | INFO     | [payload] validate_post thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,782 | INFO     | [job] validate thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:43,958 | INFO     | [payload] control thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:44,222 | INFO     | [data] copytool_out thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:44,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:55:38] 2025-12-17 02:54:45,474 | INFO     | [job] queue monitor thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:54:46,422 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 21:55:38] 2025-12-17 02:55:32,788 | INFO     | [monitor] cgroup control has ended
[2025-12-16 21:55:38] 2025-12-17 02:55:33,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500756879168)>', '<ExcThread(monitor, started 140499503535872)>']
[2025-12-16 21:55:38] 2025-12-17 02:55:33,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 21:55:38] 2025-12-17 02:55:33,734 | INFO     | [monitor] control thread has ended
[2025-12-16 21:55:38] 2025-12-17 02:55:38,263 | INFO     | all workflow threads have been joined
[2025-12-16 21:55:38] 2025-12-17 02:55:38,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 21:55:38] 2025-12-17 02:55:38,269 | INFO     | traces error code: 0
[2025-12-16 21:55:38] 2025-12-17 02:55:38,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 21:55:38] 2025-12-17 02:55:38,365 [wrapper] ==== pilot stdout END ====
[2025-12-16 21:55:38] 2025-12-17 02:55:38,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 21:55:38] 2025-12-17 02:55:38,373 [wrapper] pilotpid: 26791
[2025-12-16 21:55:38] 2025-12-17 02:55:38,377 [wrapper] Pilot exit status: 0
[2025-12-16 21:55:38] 2025-12-17 02:55:38,392 [wrapper] pandaids: 6931598834
[2025-12-16 21:55:38] 2025-12-17 02:55:38,436 [wrapper] cleanup supervisor_pilot 32365 26792
[2025-12-16 21:55:38] 2025-12-17 02:55:38,440 [wrapper] Test setup, not cleaning
[2025-12-16 21:55:38] 2025-12-17 02:55:38,444 [wrapper] apfmon messages muted
[2025-12-16 21:55:38] 2025-12-17 02:55:38,448 [wrapper] ==== wrapper stdout END ====
[2025-12-16 21:55:38] 2025-12-17 02:55:38,452 [wrapper] ==== wrapper stderr END ====
[2025-12-16 21:55:38]  *** Error codes and diagnostics ***
[2025-12-16 21:55:38]     "exeErrorCode": 0,
[2025-12-16 21:55:38]     "exeErrorDiag": "",
[2025-12-16 21:55:38]     "pilotErrorCode": 0,
[2025-12-16 21:55:38]     "pilotErrorDiag": "",
[2025-12-16 21:55:38]  *** Listing of results directory ***
[2025-12-16 21:55:38] total 449304
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-16 21:55:38] -rwx------ 1 boincer umatlas     36322 Dec 16 15:05 runpilot2-wrapper.sh
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 15:06 queuedata.json
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas       100 Dec 16 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 21:55:38] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 20:16 run_atlas
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas       105 Dec 16 20:16 job.xml
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas 228209770 Dec 16 20:16 EVNT.47898761._000787.pool.root.1
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 20:16 start_atlas.sh
[2025-12-16 21:55:38] drwxrwx--x 2 boincer umatlas      4096 Dec 16 20:16 shared
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas    592401 Dec 16 20:16 input.tar.gz
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas         0 Dec 16 20:16 boinc_lockfile
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas      2508 Dec 16 20:16 pandaJob.out
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas        57 Dec 16 20:16 setup.sh.local
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas    987401 Dec 16 20:16 agis_schedconf.cvmfs.json
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas   1516240 Dec 16 20:16 agis_ddmendpoints.agis.ALL.json
[2025-12-16 21:55:38] drwx------ 5 boincer umatlas      4096 Dec 16 20:16 pilot3
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 21:45 init_data.xml
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas        95 Dec 16 21:53 pilot_heartbeat.json
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas 225480091 Dec 16 21:53 HITS.47898763._020277.pool.root.1
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas       529 Dec 16 21:54 boinc_task_state.xml
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas      1047 Dec 16 21:54 memory_monitor_summary.json
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas    404958 Dec 16 21:54 log.47898763._020277.job.log.tgz.1
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas      7851 Dec 16 21:54 heartbeat.json
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 21:55 boinc_mmap_file
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas        27 Dec 16 21:55 wrapper_checkpoint.txt
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas      4552 Dec 16 21:55 pilotlog.txt
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas    838236 Dec 16 21:55 log.47898763._020277.job.log.1
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas       357 Dec 16 21:55 output.list
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas       620 Dec 16 21:55 runtime_log
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas   1259520 Dec 16 21:55 result.tar.gz
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 21:55 runtime_log.err
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas       659 Dec 16 21:55 KuQKDmAUqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmo8VKDmaKKjOn.diag
[2025-12-16 21:55:38] -rw-r--r-- 1 boincer umatlas     22100 Dec 16 21:55 stderr.txt
[2025-12-16 21:55:38] HITS file was successfully produced:
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas 225480091 Dec 16 21:53 shared/HITS.pool.root.1
[2025-12-16 21:55:38]  *** Contents of shared directory: ***
[2025-12-16 21:55:38] total 444892
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas 228209770 Dec 16 20:16 ATLAS.root_0
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 20:16 start_atlas.sh
[2025-12-16 21:55:38] -rw-r--r-- 2 boincer umatlas    592401 Dec 16 20:16 input.tar.gz
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas 225480091 Dec 16 21:53 HITS.pool.root.1
[2025-12-16 21:55:38] -rw------- 1 boincer umatlas   1259520 Dec 16 21:55 result.tar.gz
21:55:39 (23116): run_atlas exited; CPU time 65222.939394
21:55:39 (23116): called boinc_finish(0)

</stderr_txt>
]]>

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