Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:24 (1234322): wrapper (7.7.26015): starting
21:30:24 (1234322): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 21:30:24] Arguments: --nthreads 8
[2025-12-16 21:30:24] Threads: 8
[2025-12-16 21:30:24] Checking for CVMFS
[2025-12-16 21:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:30:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:30:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:30:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:30:26] 2.13.3.0 11235 57997 259176 154095 3 744 30589890 32935937 34853 16776704 0 540449252 99.567 578361555 17981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 21:30:26] CVMFS is ok
[2025-12-16 21:30:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:30:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:30:26] Further information can be found at the LHC@home message board.
[2025-12-16 21:30:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:30:26] Checking for apptainer binary...
[2025-12-16 21:30:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:30:26] Running /usr/bin/apptainer --version
[2025-12-16 21:30:26] apptainer version 1.4.5-2.el9
[2025-12-16 21:30:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:30:26] c7-2-37.aglt2.org
[2025-12-16 21:30:26] apptainer works
[2025-12-16 21:30:27] Set ATHENA_PROC_NUMBER=8
[2025-12-16 21:30:27] Set ATHENA_CORE_NUMBER=8
[2025-12-16 21:30:27] Starting ATLAS job with PandaID=6931598771
[2025-12-16 21:30:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:46:09]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:46:09] 2025-12-17 08:45:26,374 | INFO     | monitor loop #1172: job 0:6931598771 is in state 'finished'
[2025-12-17 03:46:09] 2025-12-17 08:45:26,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:46:09] 2025-12-17 08:45:27,741 | INFO     | time since job start (22446s) is within the limit (174528.0s)
[2025-12-17 03:46:09] 2025-12-17 08:45:28,882 | INFO     | monitor loop #1173: job 0:6931598771 is in state 'finished'
[2025-12-17 03:46:09] 2025-12-17 08:45:28,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,044 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 03:46:09] 2025-12-17 08:45:30,082 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3251.7264479166665
[2025-12-17 03:46:09] 2025-12-17 08:45:30,126 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931598771/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,127 | INFO     | extracted standard info from prmon json
[2025-12-17 03:46:09] 2025-12-17 08:45:30,127 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 03:46:09] 2025-12-17 08:45:30,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 03:46:09] 2025-12-17 08:45:30,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 03:46:09] 2025-12-17 08:45:30,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 03:46:09] 2025-12-17 08:45:30,132 | INFO     | fitting pss+swap vs Time
[2025-12-17 03:46:09] 2025-12-17 08:45:30,133 | INFO     | sum of square deviations: 15327112719.346119
[2025-12-17 03:46:09] 2025-12-17 08:45:30,136 | INFO     | sum of deviations: 19574395488.798363
[2025-12-17 03:46:09] 2025-12-17 08:45:30,136 | INFO     | mean x: 1765949911.1444142
[2025-12-17 03:46:09] 2025-12-17 08:45:30,136 | INFO     | mean y: 2517372.8528610356
[2025-12-17 03:46:09] 2025-12-17 08:45:30,136 | INFO     | intersect: -2252793370.0842338
[2025-12-17 03:46:09] 2025-12-17 08:45:30,136 | INFO     | chi2: 1.4658524026044784
[2025-12-17 03:46:09] 2025-12-17 08:45:30,137 | INFO     | sum of square deviations: 14709154506.740393
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | sum of deviations: 19250886766.486214
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | mean x: 1765949758.6464088
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | mean y: 2517293.0662983423
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | intersect: -2308703166.5071692
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | chi2: 1.4660626517727784
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | current chi2=1.4660626517727784 (change=-0.014343133587424794 %)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,140 | INFO     | right removable region: 361
[2025-12-17 03:46:09] 2025-12-17 08:45:30,141 | INFO     | sum of square deviations: 14709122176.740395
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | sum of deviations: -30425774440.127083
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | mean x: 1765950063.6464088
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | mean y: 2529614.7099447516
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | intersect: 3655391944.8629866
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | chi2: 0.07142871858787896
[2025-12-17 03:46:09] 2025-12-17 08:45:30,144 | INFO     | current chi2=0.07142871858787896 (change=95.1271547898706 %)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,145 | INFO     | sum of square deviations: 14107969159.13164
[2025-12-17 03:46:09] 2025-12-17 08:45:30,147 | INFO     | sum of deviations: -27159891050.588238
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | mean x: 1765950216.1484594
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | mean y: 2528776.294117647
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | intersect: 3402239601.456361
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | chi2: 0.060374967740483544
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | current chi2=0.060374967740483544 (change=15.475219303837784 %)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,148 | INFO     | left removable region: 20
[2025-12-17 03:46:09] 2025-12-17 08:45:30,149 | INFO     | sum of square deviations: 12294865179.24344
[2025-12-17 03:46:09] 2025-12-17 08:45:30,151 | INFO     | sum of deviations: -10438915735.070383
[2025-12-17 03:46:09] 2025-12-17 08:45:30,151 | INFO     | mean x: 1765950338.1407626
[2025-12-17 03:46:09] 2025-12-17 08:45:30,151 | INFO     | mean y: 2524390.5014662757
[2025-12-17 03:46:09] 2025-12-17 08:45:30,152 | INFO     | intersect: 1501898845.073959
[2025-12-17 03:46:09] 2025-12-17 08:45:30,152 | INFO     | chi2: 0.02996900656567924
[2025-12-17 03:46:09] 2025-12-17 08:45:30,152 | INFO     | current memory leak: -0.85 B/s (using 341 data points, chi2=0.03)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | could have reported an average CPU frequency of 3233 MHz (16 samples)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | ..............................
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . Timing measurements:
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . get job = 0 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . initial setup = 5 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . payload setup = 16 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . stage-in = 0 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . payload execution = 22372 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . stage-out = 4 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | . log creation = 0 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,153 | INFO     | ..............................
[2025-12-17 03:46:09] 2025-12-17 08:45:30,225 | INFO     | PID=1250158 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,225 | INFO     | .. there are 47 such processes running
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | job summary report
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | --------------------------------------------------
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | PanDA job id: 6931598771
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | task id: 47898763
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | errors: (none)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | pilot state: finished 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | transexitcode: 0
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | exeerrorcode: 0
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | exeerrordiag: 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | exitcode: 0
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | exitmsg: OK
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | cpuconsumptiontime: 46377 s
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | nevents: 400
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | neventsw: 0
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | pid: 1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | pgrp: 1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | corecount: 8
[2025-12-17 03:46:09] 2025-12-17 08:45:30,261 | INFO     | event service: False
[2025-12-17 03:46:09] 2025-12-17 08:45:30,262 | INFO     | sizes: {0: 2283785, 1: 2283984, 2: 2283984, 13: 2284012, 20: 2284330, 23: 2284358, 22393: 2318262, 22398: 2327316, 22408: 2327454}
[2025-12-17 03:46:09] 2025-12-17 08:45:30,262 | INFO     | --------------------------------------------------
[2025-12-17 03:46:09] 2025-12-17 08:45:30,262 | INFO     | 
[2025-12-17 03:46:09] 2025-12-17 08:45:30,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 03:46:09] 2025-12-17 08:45:30,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | job 6931598771 has completed (purged errors)
[2025-12-17 03:46:09] 2025-12-17 08:45:30,326 | INFO     | overall cleanup function is called
[2025-12-17 03:46:09] 2025-12-17 08:45:31,338 | INFO     | --- collectZombieJob: --- 10, [1276978]
[2025-12-17 03:46:09] 2025-12-17 08:45:31,338 | INFO     | zombie collector waiting for pid 1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:31,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 03:46:09] 2025-12-17 08:45:31,338 | INFO     | collected zombie processes
[2025-12-17 03:46:09] 2025-12-17 08:45:31,338 | INFO     | will attempt to kill all subprocesses of pid=1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:32,758 | INFO     | process IDs to be killed: [1276978] (in reverse order)
[2025-12-17 03:46:09] 2025-12-17 08:45:33,044 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 03:46:09] 2025-12-17 08:45:33,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 03:46:09] 2025-12-17 08:45:33,092 | INFO     | did not find any defunct processes belonging to 1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:33,119 | INFO     | did not find any defunct processes belonging to 1276978
[2025-12-17 03:46:09] 2025-12-17 08:45:33,119 | INFO     | ready for new job
[2025-12-17 03:46:09] 2025-12-17 08:45:33,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 03:46:09] 2025-12-17 08:45:33,122 | INFO     | ***************************************
[2025-12-17 03:46:09] 2025-12-17 08:45:33,122 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 03:46:09] 2025-12-17 08:45:33,122 | INFO     | ***************************************
[2025-12-17 03:46:09] 2025-12-17 08:45:33,122 | INFO     | 
[2025-12-17 03:46:09] 2025-12-17 08:45:33,127 | INFO     | architecture information:
[2025-12-17 03:46:09] 2025-12-17 08:45:33,127 | INFO     | executing command: cat /etc/os-release
[2025-12-17 03:46:09] 2025-12-17 08:45:33,148 | INFO     | cat /etc/os-release:
[2025-12-17 03:46:09] NAME="CentOS Linux"
[2025-12-17 03:46:09] VERSION="7 (Core)"
[2025-12-17 03:46:09] ID="centos"
[2025-12-17 03:46:09] ID_LIKE="rhel fedora"
[2025-12-17 03:46:09] VERSION_ID="7"
[2025-12-17 03:46:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 03:46:09] ANSI_COLOR="0;31"
[2025-12-17 03:46:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 03:46:09] HOME_URL="https://www.centos.org/"
[2025-12-17 03:46:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 03:46:09] 
[2025-12-17 03:46:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 03:46:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 03:46:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 03:46:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 03:46:09] 
[2025-12-17 03:46:09] 2025-12-17 08:45:33,148 | INFO     | ***************************************
[2025-12-17 03:46:09] 2025-12-17 08:45:33,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 03:46:09] 2025-12-17 08:45:33,720 | INFO     | sufficient remaining disk space (74469867520 B)
[2025-12-17 03:46:09] 2025-12-17 08:45:33,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:46:09] 2025-12-17 08:45:33,721 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:46:09] 2025-12-17 08:45:33,721 | INFO     | update_server=False
[2025-12-17 03:46:09] 2025-12-17 08:45:33,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:46:09] 2025-12-17 08:45:33,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:46:09] 2025-12-17 08:45:33,908 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 03:46:09] 2025-12-17 08:45:33,908 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 03:46:09] 2025-12-17 08:45:33,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:46:09] 2025-12-17 08:45:33,908 | INFO     | will abort loop
[2025-12-17 03:46:09] 2025-12-17 08:45:34,018 | INFO     | all job control threads have been joined
[2025-12-17 03:46:09] 2025-12-17 08:45:34,397 | INFO     | all payload control threads have been joined
[2025-12-17 03:46:09] 2025-12-17 08:45:34,727 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:34,839 | INFO     | all data control threads have been joined
[2025-12-17 03:46:09] 2025-12-17 08:45:34,915 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:34,959 | INFO     | [job] validate thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,025 | INFO     | [job] control thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:46:09] 2025-12-17 08:45:35,127 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,180 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,249 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:46:09] 2025-12-17 08:45:35,403 | INFO     | [payload] control thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,621 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,728 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,764 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,845 | INFO     | [data] control thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:35,985 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:36,277 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:45:39,109 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:46:09] 2025-12-17 08:46:02,104 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:46:09] 2025-12-17 08:46:03,680 | INFO     | PID=1250158 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 03:46:09] 2025-12-17 08:46:03,680 | INFO     | .. there are 46 such processes running
[2025-12-17 03:46:09] 2025-12-17 08:46:03,680 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:46:09] 2025-12-17 08:46:03,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:46:09] 2025-12-17 08:46:03,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:46:09] 2025-12-17 08:46:03,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828670248768)>', '<ExcThread(monitor, started 139827928348416)>']
[2025-12-17 03:46:09] 2025-12-17 08:46:04,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:46:09] 2025-12-17 08:46:04,687 | INFO     | [monitor] control thread has ended
[2025-12-17 03:46:09] 2025-12-17 08:46:08,807 | INFO     | all workflow threads have been joined
[2025-12-17 03:46:09] 2025-12-17 08:46:08,807 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:46:09] 2025-12-17 08:46:08,807 | INFO     | traces error code: 0
[2025-12-17 03:46:09] 2025-12-17 08:46:08,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:46:09] 2025-12-17 08:46:09,124 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:46:09] 2025-12-17 08:46:09,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:46:09] 2025-12-17 08:46:09,132 [wrapper] pilotpid: 1250158
[2025-12-17 03:46:09] 2025-12-17 08:46:09,135 [wrapper] Pilot exit status: 0
[2025-12-17 03:46:09] 2025-12-17 08:46:09,143 [wrapper] pandaids: 6931598771
[2025-12-17 03:46:09] 2025-12-17 08:46:09,267 [wrapper] cleanup supervisor_pilot  794591 1250159
[2025-12-17 03:46:09] 2025-12-17 08:46:09,271 [wrapper] Test setup, not cleaning
[2025-12-17 03:46:09] 2025-12-17 08:46:09,276 [wrapper] apfmon messages muted
[2025-12-17 03:46:09] 2025-12-17 08:46:09,288 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:46:09] 2025-12-17 08:46:09,331 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:46:09]  *** Error codes and diagnostics ***
[2025-12-17 03:46:09]     "exeErrorCode": 0,
[2025-12-17 03:46:09]     "exeErrorDiag": "",
[2025-12-17 03:46:09]     "pilotErrorCode": 0,
[2025-12-17 03:46:09]     "pilotErrorDiag": "",
[2025-12-17 03:46:09]  *** Listing of results directory ***
[2025-12-17 03:46:09] total 446400
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 15:04 queuedata.json
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-17 03:46:09] -rwx------. 1 boincer umatlas     36322 Dec 16 15:04 runpilot2-wrapper.sh
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas       100 Dec 16 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:46:09] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 21:30 run_atlas
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas       105 Dec 16 21:30 job.xml
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas 224829736 Dec 16 21:30 EVNT.47898761._000785.pool.root.1
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:30 start_atlas.sh
[2025-12-17 03:46:09] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 21:30 shared
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 21:30 input.tar.gz
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas         0 Dec 16 21:30 boinc_lockfile
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas      2507 Dec 16 21:30 pandaJob.out
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas        57 Dec 16 21:30 setup.sh.local
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas    987409 Dec 16 21:31 agis_schedconf.cvmfs.json
[2025-12-17 03:46:09] drwx------. 5 boincer umatlas      4096 Dec 16 21:31 pilot3
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas      6945 Dec 17 03:36 init_data.xml
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas 222177504 Dec 17 03:44 HITS.47898763._020215.pool.root.1
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas       531 Dec 17 03:44 boinc_task_state.xml
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas      1050 Dec 17 03:45 memory_monitor_summary.json
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas   1516240 Dec 17 03:45 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas    526920 Dec 17 03:45 log.47898763._020215.job.log.tgz.1
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas        95 Dec 17 03:45 pilot_heartbeat.json
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas      7794 Dec 17 03:45 heartbeat.json
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 03:46 boinc_mmap_file
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas        28 Dec 17 03:46 wrapper_checkpoint.txt
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas      5010 Dec 17 03:46 pilotlog.txt
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas   2568184 Dec 17 03:46 log.47898763._020215.job.log.1
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas       357 Dec 17 03:46 output.list
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas       620 Dec 17 03:46 runtime_log
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas   3112960 Dec 17 03:46 result.tar.gz
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas      9338 Dec 17 03:46 runtime_log.err
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas       661 Dec 17 03:46 GDgKDm8Sqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr5VKDmjqQ44m.diag
[2025-12-17 03:46:09] -rw-r--r--. 1 boincer umatlas     21497 Dec 17 03:46 stderr.txt
[2025-12-17 03:46:09] HITS file was successfully produced:
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas 222177504 Dec 17 03:44 shared/HITS.pool.root.1
[2025-12-17 03:46:09]  *** Contents of shared directory: ***
[2025-12-17 03:46:09] total 440180
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas 224829736 Dec 16 21:30 ATLAS.root_0
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:30 start_atlas.sh
[2025-12-17 03:46:09] -rw-r--r--. 2 boincer umatlas    592394 Dec 16 21:30 input.tar.gz
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas 222177504 Dec 17 03:44 HITS.pool.root.1
[2025-12-17 03:46:09] -rw-------. 1 boincer umatlas   3112960 Dec 17 03:46 result.tar.gz
03:46:11 (1234322): run_atlas exited; CPU time 47345.957861
03:46:11 (1234322): called boinc_finish(0)

</stderr_txt>
]]>

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