Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:59:38 (751193): wrapper (7.7.26015): starting
07:59:38 (751193): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 07:59:38] Arguments: --nthreads 3
[2025-12-17 07:59:38] Threads: 3
[2025-12-17 07:59:38] Checking for CVMFS
[2025-12-17 07:59:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 07:59:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 07:59:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 07:59:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 07:59:38] 2.9.2.0 3564296 5524 87864 154102 3 57 31092769 36864000 0 130560 0 3648688 99.989 205083 7239 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 07:59:38] CVMFS is ok
[2025-12-17 07:59:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 07:59:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 07:59:38] Further information can be found at the LHC@home message board.
[2025-12-17 07:59:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 07:59:38] Checking for apptainer binary...
[2025-12-17 07:59:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 07:59:38] Running /usr/bin/apptainer --version
[2025-12-17 07:59:38] apptainer version 1.4.1-1.1
[2025-12-17 07:59:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 07:59:38] thA371b
[2025-12-17 07:59:38] apptainer works
[2025-12-17 07:59:38] Set ATHENA_PROC_NUMBER=3
[2025-12-17 07:59:38] Set ATHENA_CORE_NUMBER=3
[2025-12-17 07:59:38] Starting ATLAS job with PandaID=6933463627
[2025-12-17 07:59:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 09:20:55]  *** The last 200 lines of the pilot log: ***
[2025-12-17 09:20:55] 2025-12-17 08:19:58,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 09:20:55] 2025-12-17 08:19:58,712 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 09:20:55] 2025-12-17 08:19:58,712 | INFO     | update_server=False
[2025-12-17 09:20:55] 2025-12-17 08:19:58,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 09:20:55] 2025-12-17 08:19:58,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:20:55] 2025-12-17 08:19:58,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 09:20:55] 2025-12-17 08:19:58,810 | INFO     | all data control threads have been joined
[2025-12-17 09:20:55] 2025-12-17 08:19:58,867 | INFO     | all payload control threads have been joined
[2025-12-17 09:20:55] 2025-12-17 08:19:58,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 09:20:55] 2025-12-17 08:19:58,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 09:20:55] 2025-12-17 08:19:58,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:20:55] 2025-12-17 08:19:58,914 | INFO     | will abort loop
[2025-12-17 09:20:55] 2025-12-17 08:19:59,717 | INFO     | [job] queue monitor thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,718 | INFO     | [job] retrieve thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,727 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,762 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,816 | INFO     | [data] control thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,872 | INFO     | [payload] control thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,895 | INFO     | [payload] validate_post thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:19:59,918 | INFO     | [job] job monitor thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:00,222 | INFO     | all job control threads have been joined
[2025-12-17 09:20:55] 2025-12-17 08:20:00,485 | INFO     | [payload] failed_post thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:00,593 | INFO     | [data] copytool_in thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:00,733 | INFO     | [data] copytool_out thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:00,762 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:01,140 | INFO     | [job] validate thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:01,228 | INFO     | [job] control thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:01,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 09:20:55] 2025-12-17 08:20:05,390 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:09,662 | INFO     | job.realtimelogging is not enabled
[2025-12-17 09:20:55] 2025-12-17 08:20:10,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 09:20:55] 2025-12-17 08:20:29,212 | INFO     | PID=754917 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 09:20:55] 2025-12-17 08:20:29,212 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 09:20:55] 2025-12-17 08:20:29,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 09:20:55] 2025-12-17 08:20:29,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 09:20:55] 2025-12-17 08:20:49,237 | INFO     | [monitor] cgroup control has ended
[2025-12-17 09:20:55] 2025-12-17 08:20:50,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378674984768)>', '<ExcThread(monitor, started 140378053277440)>']
[2025-12-17 09:20:55] 2025-12-17 08:20:51,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 09:20:55] 2025-12-17 08:20:51,327 | INFO     | [monitor] control thread has ended
[2025-12-17 09:20:55] 2025-12-17 08:20:55,751 | INFO     | all workflow threads have been joined
[2025-12-17 09:20:55] 2025-12-17 08:20:55,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 09:20:55] 2025-12-17 08:20:55,752 | INFO     | traces error code: 0
[2025-12-17 09:20:55] 2025-12-17 08:20:55,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 09:20:55] 2025-12-17 08:20:55,802 [wrapper] ==== pilot stdout END ====
[2025-12-17 09:20:55] 2025-12-17 08:20:55,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 09:20:55] 2025-12-17 08:20:55,807 [wrapper] pilotpid: 754917
[2025-12-17 09:20:55] 2025-12-17 08:20:55,809 [wrapper] Pilot exit status: 0
[2025-12-17 09:20:55] 2025-12-17 08:20:55,816 [wrapper] pandaids: 6933463627
[2025-12-17 09:20:55] 2025-12-17 08:20:55,832 [wrapper] cleanup supervisor_pilot  773136 754918
[2025-12-17 09:20:55] 2025-12-17 08:20:55,835 [wrapper] Test setup, not cleaning
[2025-12-17 09:20:55] 2025-12-17 08:20:55,837 [wrapper] apfmon messages muted
[2025-12-17 09:20:55] 2025-12-17 08:20:55,839 [wrapper] ==== wrapper stdout END ====
[2025-12-17 09:20:55] 2025-12-17 08:20:55,841 [wrapper] ==== wrapper stderr END ====
[2025-12-17 09:20:55]  *** Error codes and diagnostics ***
[2025-12-17 09:20:55]     "exeErrorCode": 0,
[2025-12-17 09:20:55]     "exeErrorDiag": "",
[2025-12-17 09:20:55]     "pilotErrorCode": 0,
[2025-12-17 09:20:55]     "pilotErrorDiag": "",
[2025-12-17 09:20:55]  *** Listing of results directory ***
[2025-12-17 09:20:55] total 376896
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      5112 Dec 16 21:04 queuedata.json
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc    579449 Dec 16 21:04 pilot3.tar.gz
[2025-12-17 09:20:55] -rwx------ 1 boinc boinc     36322 Dec 16 21:04 runpilot2-wrapper.sh
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc       100 Dec 17 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 09:20:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 07:59 run_atlas
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc       105 Dec 17 07:59 job.xml
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc 195382897 Dec 17 07:59 EVNT.47899040._000148.pool.root.1
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc    592393 Dec 17 07:59 input.tar.gz
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:59 start_atlas.sh
[2025-12-17 09:20:55] drwxrwx--x 2 boinc boinc      4096 Dec 17 07:59 shared
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc         0 Dec 17 07:59 boinc_setup_complete
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      6440 Dec 17 07:59 init_data.xml
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc         0 Dec 17 07:59 boinc_lockfile
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      2495 Dec 17 07:59 pandaJob.out
[2025-12-17 09:20:55] -rw------- 1 boinc boinc    987409 Dec 17 07:59 agis_schedconf.cvmfs.json
[2025-12-17 09:20:55] -rw------- 1 boinc boinc   1516240 Dec 17 07:59 agis_ddmendpoints.agis.ALL.json
[2025-12-17 09:20:55] drwx------ 5 boinc boinc      4096 Dec 17 07:59 pilot3
[2025-12-17 09:20:55] -rw------- 1 boinc boinc 184754031 Dec 17 09:19 HITS.47899042._003848.pool.root.1
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc       529 Dec 17 09:19 boinc_task_state.xml
[2025-12-17 09:20:55] -rw------- 1 boinc boinc      1020 Dec 17 09:19 memory_monitor_summary.json
[2025-12-17 09:20:55] -rw------- 1 boinc boinc    246277 Dec 17 09:19 log.47899042._003848.job.log.tgz.1
[2025-12-17 09:20:55] -rw------- 1 boinc boinc      7755 Dec 17 09:19 heartbeat.json
[2025-12-17 09:20:55] -rw------- 1 boinc boinc        95 Dec 17 09:20 pilot_heartbeat.json
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc        27 Dec 17 09:20 wrapper_checkpoint.txt
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      8192 Dec 17 09:20 boinc_mmap_file
[2025-12-17 09:20:55] -rw------- 1 boinc boinc      5009 Dec 17 09:20 pilotlog.txt
[2025-12-17 09:20:55] -rw------- 1 boinc boinc    707479 Dec 17 09:20 log.47899042._003848.job.log.1
[2025-12-17 09:20:55] -rw------- 1 boinc boinc       357 Dec 17 09:20 output.list
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc       620 Dec 17 09:20 runtime_log
[2025-12-17 09:20:55] -rw------- 1 boinc boinc    972800 Dec 17 09:20 result.tar.gz
[2025-12-17 09:20:55] -rw------- 1 boinc boinc       659 Dec 17 09:20 ClqNDmxSqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm94VKDmZ3JZqn.diag
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      8902 Dec 17 09:20 runtime_log.err
[2025-12-17 09:20:55] -rw-r--r-- 1 boinc boinc      7965 Dec 17 09:20 stderr.txt
[2025-12-17 09:20:55] HITS file was successfully produced:
[2025-12-17 09:20:55] -rw------- 1 boinc boinc 184754031 Dec 17 09:19 shared/HITS.pool.root.1
[2025-12-17 09:20:55]  *** Contents of shared directory: ***
[2025-12-17 09:20:55] total 372784
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc 195382897 Dec 17 07:59 ATLAS.root_0
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc    592393 Dec 17 07:59 input.tar.gz
[2025-12-17 09:20:55] -rw-r--r-- 2 boinc boinc     15847 Dec 17 07:59 start_atlas.sh
[2025-12-17 09:20:55] -rw------- 1 boinc boinc 184754031 Dec 17 09:19 HITS.pool.root.1
[2025-12-17 09:20:55] -rw------- 1 boinc boinc    972800 Dec 17 09:20 result.tar.gz
09:20:57 (751193): run_atlas exited; CPU time 13816.232945
09:20:57 (751193): called boinc_finish(0)

</stderr_txt>
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