Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:13:46 (697270): wrapper (7.7.26015): starting
17:13:46 (697270): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 17:13:46] Arguments: --nthreads 12
[2025-12-16 17:13:46] Threads: 12
[2025-12-16 17:13:46] Checking for CVMFS
[2025-12-16 17:13:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 17:13:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 17:13:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 17:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 17:13:46] 2.11.5.0 143847 57621 402376 154093 2 658 34956185 45568000 12184 130560 0 466253671 99.778 317771071 22629 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-12-16 17:13:46] CVMFS is ok
[2025-12-16 17:13:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 17:13:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 17:13:46] Further information can be found at the LHC@home message board.
[2025-12-16 17:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 17:13:46] Checking for apptainer binary...
[2025-12-16 17:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 17:13:46] Running /usr/bin/apptainer --version
[2025-12-16 17:13:47] apptainer version 1.4.1-1.el9
[2025-12-16 17:13:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 17:13:47] wns0057.triumf.lcg
[2025-12-16 17:13:47] apptainer works
[2025-12-16 17:13:47] Set ATHENA_PROC_NUMBER=12
[2025-12-16 17:13:47] Set ATHENA_CORE_NUMBER=12
[2025-12-16 17:13:47] Starting ATLAS job with PandaID=6933463667
[2025-12-16 17:13:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 17:19:34]  *** The last 200 lines of the pilot log: ***
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | wrong length of table data, x=[1765934158.0], y=[1701.0] (must be same and length>=4)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | . Timing measurements:
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . get job = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . initial setup = 3 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload setup = 30 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-in = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload execution = 56 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-out = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . log creation = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463667/pilotlog.txt
[2025-12-16 17:19:34] 2025-12-17 01:19:00,336 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 17:19:34] - Log from pilotlog.txt -
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6933463667/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | extracted standard info from prmon json
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | wrong length of table data, x=[1765934158.0], y=[1701.0] (must be same and length>=4)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | . Timing measurements:
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . get job = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . initial setup = 3 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload setup = 30 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-in = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload execution = 56 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-out = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . log creation = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463667/pilotlog.txt
[2025-12-16 17:19:34] 2025-12-17 01:19:00,337 | WARNING  | 
[2025-12-16 17:19:34] [begin log extracts]
[2025-12-16 17:19:34] - Log from pilotlog.txt -
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6933463667/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | extracted standard info from prmon json
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 17:19:34] 2025-12-17 01:19:00,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | WARNING  | wrong length of table data, x=[1765934158.0], y=[1701.0] (must be same and length>=4)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,268 | INFO     | . Timing measurements:
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . get job = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . initial setup = 3 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload setup = 30 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-in = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . payload execution = 56 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . stage-out = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | . log creation = 0 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | ..............................
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 17:19:34] 2025-12-17 01:19:00,269 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6933463667/pilotlog.txt
[2025-12-16 17:19:34] [end log extracts]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,337 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,338 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 17:19:34] 2025-12-17 01:19:00,759 | INFO     | 
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | job summary report
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | --------------------------------------------------
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | PanDA job id: 6933463667
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | task id: 47899042
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 17:16:27,507 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | pilot state: failed 
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | transexitcode: 65
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | exeerrorcode: 65
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | exitcode: 65
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | cpuconsumptiontime: 17 s
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | nevents: 0
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | neventsw: 0
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | pid: 721049
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | pgrp: 721049
[2025-12-16 17:19:34] 2025-12-17 01:19:00,760 | INFO     | corecount: 12
[2025-12-16 17:19:34] 2025-12-17 01:19:00,761 | INFO     | event service: False
[2025-12-16 17:19:34] 2025-12-17 01:19:00,761 | INFO     | sizes: {0: 2283709, 1: 2283964, 2: 2283964, 13: 2283992, 24: 2284048, 25: 2284338, 35: 2284494, 90: 2307741, 91: 2312033, 94: 2312061, 235: 2312227}
[2025-12-16 17:19:34] 2025-12-17 01:19:00,761 | INFO     | --------------------------------------------------
[2025-12-16 17:19:34] 2025-12-17 01:19:00,761 | INFO     | 
[2025-12-16 17:19:34] 2025-12-17 01:19:00,761 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | job 6933463667 has completed (purged errors)
[2025-12-16 17:19:34] 2025-12-17 01:19:00,914 | INFO     | overall cleanup function is called
[2025-12-16 17:19:34] 2025-12-17 01:19:01,928 | INFO     | --- collectZombieJob: --- 10, [721049]
[2025-12-16 17:19:34] 2025-12-17 01:19:01,929 | INFO     | zombie collector waiting for pid 721049
[2025-12-16 17:19:34] 2025-12-17 01:19:01,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 17:19:34] 2025-12-17 01:19:01,929 | INFO     | collected zombie processes
[2025-12-16 17:19:34] 2025-12-17 01:19:01,929 | INFO     | will attempt to kill all subprocesses of pid=721049
[2025-12-16 17:19:34] 2025-12-17 01:19:02,099 | INFO     | process IDs to be killed: [721049] (in reverse order)
[2025-12-16 17:19:34] 2025-12-17 01:19:02,682 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 17:19:34] 2025-12-17 01:19:02,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 17:19:34] 2025-12-17 01:19:02,717 | INFO     | did not find any defunct processes belonging to 721049
[2025-12-16 17:19:34] 2025-12-17 01:19:02,760 | INFO     | did not find any defunct processes belonging to 721049
[2025-12-16 17:19:34] 2025-12-17 01:19:02,760 | INFO     | ready for new job
[2025-12-16 17:19:34] 2025-12-17 01:19:02,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 17:19:34] 2025-12-17 01:19:02,798 | INFO     | ***************************************
[2025-12-16 17:19:34] 2025-12-17 01:19:02,798 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 17:19:34] 2025-12-17 01:19:02,798 | INFO     | ***************************************
[2025-12-16 17:19:34] 2025-12-17 01:19:02,798 | INFO     | 
[2025-12-16 17:19:34] 2025-12-17 01:19:02,800 | INFO     | architecture information:
[2025-12-16 17:19:34] 2025-12-17 01:19:02,819 | INFO     | executing command: cat /etc/os-release
[2025-12-16 17:19:34] 2025-12-17 01:19:02,925 | INFO     | cat /etc/os-release:
[2025-12-16 17:19:34] NAME="CentOS Linux"
[2025-12-16 17:19:34] VERSION="7 (Core)"
[2025-12-16 17:19:34] ID="centos"
[2025-12-16 17:19:34] ID_LIKE="rhel fedora"
[2025-12-16 17:19:34] VERSION_ID="7"
[2025-12-16 17:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 17:19:34] ANSI_COLOR="0;31"
[2025-12-16 17:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 17:19:34] HOME_URL="https://www.centos.org/"
[2025-12-16 17:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 17:19:34] 
[2025-12-16 17:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 17:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 17:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 17:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 17:19:34] 
[2025-12-16 17:19:34] 2025-12-17 01:19:02,931 | INFO     | ***************************************
[2025-12-16 17:19:34] 2025-12-17 01:19:03,433 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 17:19:34] 2025-12-17 01:19:03,448 | INFO     | sufficient remaining disk space (2131053510656 B)
[2025-12-16 17:19:34] 2025-12-17 01:19:03,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 17:19:34] 2025-12-17 01:19:03,448 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 17:19:34] 2025-12-17 01:19:03,449 | INFO     | update_server=False
[2025-12-16 17:19:34] 2025-12-17 01:19:03,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 17:19:34] 2025-12-17 01:19:03,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:19:34] 2025-12-17 01:19:03,449 | INFO     | aborting loop
[2025-12-16 17:19:34] 2025-12-17 01:19:03,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 17:19:34] 2025-12-17 01:19:03,603 | INFO     | all data control threads have been joined
[2025-12-16 17:19:34] 2025-12-17 01:19:04,454 | INFO     | [job] retrieve thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,454 | INFO     | [job] job monitor thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,566 | INFO     | [job] validate thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,610 | INFO     | [data] control thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,827 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,830 | INFO     | all payload control threads have been joined
[2025-12-16 17:19:34] 2025-12-17 01:19:04,867 | INFO     | [payload] failed_post thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:04,875 | INFO     | [data] copytool_in thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,030 | INFO     | all job control threads have been joined
[2025-12-16 17:19:34] 2025-12-17 01:19:05,387 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,457 | INFO     | [data] copytool_out thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,738 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:19:34] 2025-12-17 01:19:05,836 | INFO     | [payload] control thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:05,987 | INFO     | [payload] validate_post thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:06,036 | INFO     | [job] control thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:06,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 17:19:34] 2025-12-17 01:19:06,833 | INFO     | [job] queue monitor thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:09,001 | INFO     | [monitor] cgroup control has ended
[2025-12-16 17:19:34] 2025-12-17 01:19:10,319 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 17:19:34] 2025-12-17 01:19:10,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529634350912)>', '<ExcThread(monitor, started 140528553281280)>']
[2025-12-16 17:19:34] 2025-12-17 01:19:15,352 | INFO     | all workflow threads have been joined
[2025-12-16 17:19:34] 2025-12-17 01:19:15,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 17:19:34] 2025-12-17 01:19:15,353 | INFO     | traces error code: 0
[2025-12-16 17:19:34] 2025-12-17 01:19:15,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 17:19:34] 2025-12-17 01:19:32,742 | INFO     | PID=704327 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 17:19:34] 2025-12-17 01:19:32,742 | INFO     | .. there are 28 such processes running
[2025-12-16 17:19:34] 2025-12-17 01:19:32,743 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 17:19:34] 2025-12-17 01:19:32,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 17:19:34] 2025-12-17 01:19:32,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 17:19:34] 2025-12-17 01:19:32,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 17:19:34] 2025-12-17 01:19:32,743 | INFO     | [monitor] control thread has ended
[2025-12-16 17:19:34] 2025-12-17 01:19:33,068 [wrapper] ==== pilot stdout END ====
[2025-12-16 17:19:34] 2025-12-17 01:19:33,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 17:19:34] 2025-12-17 01:19:33,125 [wrapper] pilotpid: 704327
[2025-12-16 17:19:34] 2025-12-17 01:19:33,144 [wrapper] Pilot exit status: 0
[2025-12-16 17:19:34] 2025-12-17 01:19:33,258 [wrapper] pandaids: 6933463667
[2025-12-16 17:19:34] 2025-12-17 01:19:33,590 [wrapper] cleanup supervisor_pilot  704343 704328
[2025-12-16 17:19:34] 2025-12-17 01:19:33,603 [wrapper] Test setup, not cleaning
[2025-12-16 17:19:34] 2025-12-17 01:19:33,623 [wrapper] apfmon messages muted
[2025-12-16 17:19:34] 2025-12-17 01:19:33,632 [wrapper] ==== wrapper stdout END ====
[2025-12-16 17:19:34] 2025-12-17 01:19:33,650 [wrapper] ==== wrapper stderr END ====
[2025-12-16 17:19:34]  *** Error codes and diagnostics ***
[2025-12-16 17:19:34]     "exeErrorCode": 65,
[2025-12-16 17:19:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 17:19:34]     "pilotErrorCode": 1305,
[2025-12-16 17:19:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 17:19:34]  *** Listing of results directory ***
[2025-12-16 17:19:34] total 197856
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc      5112 Dec 16 12:04 queuedata.json
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc    579449 Dec 16 12:04 pilot3.tar.gz
[2025-12-16 17:19:34] -rwx------. 1 boinc boinc     36322 Dec 16 12:04 runpilot2-wrapper.sh
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc       100 Dec 16 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 17:19:34] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 17:13 run_atlas
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc       105 Dec 16 17:13 job.xml
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc      6595 Dec 16 17:13 init_data.xml
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc 198460485 Dec 16 17:13 EVNT.47899040._000149.pool.root.1
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc     15847 Dec 16 17:13 start_atlas.sh
[2025-12-16 17:19:34] drwxrwx--x. 2 boinc boinc      4096 Dec 16 17:13 shared
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc    592390 Dec 16 17:13 input.tar.gz
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc         0 Dec 16 17:13 boinc_lockfile
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc      2495 Dec 16 17:13 pandaJob.out
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc    987401 Dec 16 17:14 agis_schedconf.cvmfs.json
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc   1516240 Dec 16 17:14 agis_ddmendpoints.agis.ALL.json
[2025-12-16 17:19:34] drwx------. 5 boinc boinc      4096 Dec 16 17:14 pilot3
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc       524 Dec 16 17:16 boinc_task_state.xml
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc       967 Dec 16 17:16 memory_monitor_summary.json
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc     21975 Dec 16 17:16 log.47899042._003888.job.log.tgz.1
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc      8412 Dec 16 17:19 heartbeat.json
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc        95 Dec 16 17:19 pilot_heartbeat.json
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc       822 Dec 16 17:19 pilotlog.txt
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc      8192 Dec 16 17:19 boinc_mmap_file
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc        22 Dec 16 17:19 wrapper_checkpoint.txt
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc     96002 Dec 16 17:19 log.47899042._003888.job.log.1
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc       188 Dec 16 17:19 output.list
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc       620 Dec 16 17:19 runtime_log
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc    133120 Dec 16 17:19 result.tar.gz
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc      8636 Dec 16 17:19 runtime_log.err
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc       647 Dec 16 17:19 KQgKDmySqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmS5VKDmrVd9No.diag
[2025-12-16 17:19:34] -rw-r--r--. 1 boinc boinc     21818 Dec 16 17:19 stderr.txt
[2025-12-16 17:19:34] No HITS result produced
[2025-12-16 17:19:34]  *** Contents of shared directory: ***
[2025-12-16 17:19:34] total 194544
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc 198460485 Dec 16 17:13 ATLAS.root_0
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc     15847 Dec 16 17:13 start_atlas.sh
[2025-12-16 17:19:34] -rw-r--r--. 2 boinc boinc    592390 Dec 16 17:13 input.tar.gz
[2025-12-16 17:19:34] -rw-------. 1 boinc boinc    133120 Dec 16 17:19 result.tar.gz
17:19:35 (697270): run_atlas exited; CPU time 26.945717
17:19:35 (697270): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN