Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:02:44 (3891566): wrapper (7.7.26015): starting
20:02:44 (3891566): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 20:02:44] Arguments: --nthreads 8
[2025-12-16 20:02:44] Threads: 8
[2025-12-16 20:02:44] Checking for CVMFS
[2025-12-16 20:02:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:02:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:02:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:02:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:02:45] 2.13.3.0 11314 59605 264632 154093 0 876 21522231 32935936 38682 16776704 0 527262561 99.600 562285690 34312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 20:02:45] CVMFS is ok
[2025-12-16 20:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:02:45] Further information can be found at the LHC@home message board.
[2025-12-16 20:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:02:45] Checking for apptainer binary...
[2025-12-16 20:02:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:02:45] Running /usr/bin/apptainer --version
[2025-12-16 20:02:45] apptainer version 1.4.5-2.el9
[2025-12-16 20:02:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:02:45] c7-2-10.aglt2.org
[2025-12-16 20:02:45] apptainer works
[2025-12-16 20:02:45] Set ATHENA_PROC_NUMBER=8
[2025-12-16 20:02:45] Set ATHENA_CORE_NUMBER=8
[2025-12-16 20:02:46] Starting ATLAS job with PandaID=6933463282
[2025-12-16 20:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:36:41]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:36:41] 2025-12-17 03:35:35,025 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6933463282/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,036 | INFO     | extracted standard info from prmon json
[2025-12-16 22:36:41] 2025-12-17 03:35:35,037 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:36:41] 2025-12-17 03:35:35,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:36:41] 2025-12-17 03:35:35,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:36:41] 2025-12-17 03:35:35,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:36:41] 2025-12-17 03:35:35,043 | INFO     | fitting pss+swap vs Time
[2025-12-16 22:36:41] 2025-12-17 03:35:35,043 | INFO     | sum of square deviations: 1025693040.9932907
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | sum of deviations: 21192369096.03353
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | mean x: 1765937977.0067115
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | mean y: 2426254.966442953
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | intersect: -36484522484.772354
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | chi2: 3.7854658759705737
[2025-12-16 22:36:41] 2025-12-17 03:35:35,061 | INFO     | sum of square deviations: 925858915.9930569
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | sum of deviations: 38940695020.70141
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | mean x: 1765937824.5069444
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | mean y: 2452777.798611111
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | intersect: -74271116404.05452
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | chi2: 2.3486685231382465
[2025-12-16 22:36:41] 2025-12-17 03:35:35,062 | INFO     | current chi2=2.3486685231382465 (change=37.95562818180047 %)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,063 | INFO     | sum of square deviations: 832722590.9928035
[2025-12-16 22:36:41] 2025-12-17 03:35:35,063 | INFO     | sum of deviations: 37484523004.45325
[2025-12-16 22:36:41] 2025-12-17 03:35:35,063 | INFO     | mean x: 1765937672.0071943
[2025-12-16 22:36:41] 2025-12-17 03:35:35,063 | INFO     | mean y: 2450392.54676259
[2025-12-16 22:36:41] 2025-12-17 03:35:35,063 | INFO     | intersect: -79490206594.0539
[2025-12-16 22:36:41] 2025-12-17 03:35:35,064 | INFO     | chi2: 2.3502310587753983
[2025-12-16 22:36:41] 2025-12-17 03:35:35,064 | INFO     | current chi2=2.3502310587753983 (change=-0.0665285723276087 %)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,064 | INFO     | right removable region: 138
[2025-12-16 22:36:41] 2025-12-17 03:35:35,064 | INFO     | sum of square deviations: 925858305.9930569
[2025-12-16 22:36:41] 2025-12-17 03:35:35,064 | INFO     | sum of deviations: -11580475375.819443
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | mean x: 1765938129.5069444
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | mean y: 2475874.8194444445
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | intersect: 22090524220.447372
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | chi2: 1.5624880022269925
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | current chi2=1.5624880022269925 (change=58.72402358332239 %)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,065 | INFO     | sum of square deviations: 832721370.9928035
[2025-12-16 22:36:41] 2025-12-17 03:35:35,066 | INFO     | sum of deviations: -16032727066.179853
[2025-12-16 22:36:41] 2025-12-17 03:35:35,066 | INFO     | mean x: 1765938282.0071943
[2025-12-16 22:36:41] 2025-12-17 03:35:35,066 | INFO     | mean y: 2483111.179856115
[2025-12-16 22:36:41] 2025-12-17 03:35:35,066 | INFO     | intersect: 34002819210.857765
[2025-12-16 22:36:41] 2025-12-17 03:35:35,072 | INFO     | chi2: 1.5181009172507938
[2025-12-16 22:36:41] 2025-12-17 03:35:35,072 | INFO     | current chi2=1.5181009172507938 (change=2.840795251735335 %)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | left removable region: 20
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | sum of square deviations: 509439091.49152595
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | sum of deviations: 1994463105.949153
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | mean x: 1765938251.5084746
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | mean y: 2512742.5508474577
[2025-12-16 22:36:41] 2025-12-17 03:35:35,073 | INFO     | intersect: -6911166927.586119
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | chi2: 0.000496369794061163
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | current memory leak: 3.92 B/s (using 118 data points, chi2=0.00)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | could have reported an average CPU frequency of 3276 MHz (9 samples)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | ..............................
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | . Timing measurements:
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | . get job = 0 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | . initial setup = 6 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | . payload setup = 16 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,074 | INFO     | . stage-in = 0 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,075 | INFO     | . payload execution = 9063 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,075 | INFO     | . stage-out = 2 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,075 | INFO     | . log creation = 0 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,075 | INFO     | ..............................
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | 
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | job summary report
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | --------------------------------------------------
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | PanDA job id: 6933463282
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | task id: 47899042
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | errors: (none)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | pilot state: finished 
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | transexitcode: 0
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | exeerrorcode: 0
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | exeerrordiag: 
[2025-12-16 22:36:41] 2025-12-17 03:35:35,758 | INFO     | exitcode: 0
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | exitmsg: OK
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | cpuconsumptiontime: 31682 s
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | nevents: 400
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | neventsw: 0
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | pid: 3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | pgrp: 3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | corecount: 8
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | event service: False
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | sizes: {0: 2283939, 11: 2283939, 15: 2284229, 22: 2284257, 9084: 2312562, 9088: 2321560, 9089: 2321744, 9101: 2322002}
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | --------------------------------------------------
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | 
[2025-12-16 22:36:41] 2025-12-17 03:35:35,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-16 22:36:41] 2025-12-17 03:35:35,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | job 6933463282 has completed (purged errors)
[2025-12-16 22:36:41] 2025-12-17 03:35:35,810 | INFO     | overall cleanup function is called
[2025-12-16 22:36:41] 2025-12-17 03:35:36,845 | INFO     | --- collectZombieJob: --- 10, [3908462]
[2025-12-16 22:36:41] 2025-12-17 03:35:36,845 | INFO     | zombie collector waiting for pid 3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:36,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:36:41] 2025-12-17 03:35:36,846 | INFO     | collected zombie processes
[2025-12-16 22:36:41] 2025-12-17 03:35:36,846 | INFO     | will attempt to kill all subprocesses of pid=3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:37,005 | INFO     | PID=3896411 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-16 22:36:41] 2025-12-17 03:35:37,005 | INFO     | .. there are 39 such processes running
[2025-12-16 22:36:41] 2025-12-17 03:35:38,482 | INFO     | process IDs to be killed: [3908462] (in reverse order)
[2025-12-16 22:36:41] 2025-12-17 03:35:38,701 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:36:41] 2025-12-17 03:35:38,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:36:41] 2025-12-17 03:35:38,727 | INFO     | did not find any defunct processes belonging to 3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:38,752 | INFO     | did not find any defunct processes belonging to 3908462
[2025-12-16 22:36:41] 2025-12-17 03:35:38,753 | INFO     | ready for new job
[2025-12-16 22:36:41] 2025-12-17 03:35:38,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:36:41] 2025-12-17 03:35:38,755 | INFO     | ***************************************
[2025-12-16 22:36:41] 2025-12-17 03:35:38,755 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:36:41] 2025-12-17 03:35:38,755 | INFO     | ***************************************
[2025-12-16 22:36:41] 2025-12-17 03:35:38,755 | INFO     | 
[2025-12-16 22:36:41] 2025-12-17 03:35:38,760 | INFO     | architecture information:
[2025-12-16 22:36:41] 2025-12-17 03:35:38,764 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:36:41] 2025-12-17 03:35:38,788 | INFO     | cat /etc/os-release:
[2025-12-16 22:36:41] NAME="CentOS Linux"
[2025-12-16 22:36:41] VERSION="7 (Core)"
[2025-12-16 22:36:41] ID="centos"
[2025-12-16 22:36:41] ID_LIKE="rhel fedora"
[2025-12-16 22:36:41] VERSION_ID="7"
[2025-12-16 22:36:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:36:41] ANSI_COLOR="0;31"
[2025-12-16 22:36:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:36:41] HOME_URL="https://www.centos.org/"
[2025-12-16 22:36:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:36:41] 
[2025-12-16 22:36:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:36:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:36:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:36:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:36:41] 
[2025-12-16 22:36:41] 2025-12-17 03:35:38,788 | INFO     | ***************************************
[2025-12-16 22:36:41] 2025-12-17 03:35:39,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-16 22:36:41] 2025-12-17 03:35:39,361 | INFO     | sufficient remaining disk space (74219257856 B)
[2025-12-16 22:36:41] 2025-12-17 03:35:39,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:36:41] 2025-12-17 03:35:39,362 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:36:41] 2025-12-17 03:35:39,362 | INFO     | update_server=False
[2025-12-16 22:36:41] 2025-12-17 03:35:39,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:36:41] 2025-12-17 03:35:39,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:36:41] 2025-12-17 03:35:39,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:36:41] 2025-12-17 03:35:39,695 | INFO     | all job control threads have been joined
[2025-12-16 22:36:41] 2025-12-17 03:35:39,848 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-16 22:36:41] 2025-12-17 03:35:39,848 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-16 22:36:41] 2025-12-17 03:35:39,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:36:41] 2025-12-17 03:35:39,849 | INFO     | will abort loop
[2025-12-16 22:36:41] 2025-12-17 03:35:39,938 | INFO     | all data control threads have been joined
[2025-12-16 22:36:41] 2025-12-17 03:35:40,368 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,423 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,609 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,687 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,701 | INFO     | [job] control thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:36:41] 2025-12-17 03:35:40,804 | INFO     | all payload control threads have been joined
[2025-12-16 22:36:41] 2025-12-17 03:35:40,860 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:40,944 | INFO     | [data] control thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,064 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,169 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,368 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,449 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,656 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,702 | INFO     | [job] validate thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,798 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:41,810 | INFO     | [payload] control thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:35:43,391 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:36:41] 2025-12-17 03:36:12,519 | INFO     | PID=3896411 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:36:41] 2025-12-17 03:36:12,519 | INFO     | .. there are 39 such processes running
[2025-12-16 22:36:41] 2025-12-17 03:36:12,520 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:36:41] 2025-12-17 03:36:12,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:36:41] 2025-12-17 03:36:12,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:36:41] 2025-12-17 03:36:34,967 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:36:41] 2025-12-17 03:36:35,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666358085440)>', '<ExcThread(monitor, started 140665866409728)>']
[2025-12-16 22:36:41] 2025-12-17 03:36:35,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:36:41] 2025-12-17 03:36:35,718 | INFO     | [monitor] control thread has ended
[2025-12-16 22:36:41] 2025-12-17 03:36:40,643 | INFO     | all workflow threads have been joined
[2025-12-16 22:36:41] 2025-12-17 03:36:40,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:36:41] 2025-12-17 03:36:40,648 | INFO     | traces error code: 0
[2025-12-16 22:36:41] 2025-12-17 03:36:40,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:36:41] 2025-12-17 03:36:41,611 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:36:41] 2025-12-17 03:36:41,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:36:41] 2025-12-17 03:36:41,624 [wrapper] pilotpid: 3896411
[2025-12-16 22:36:41] 2025-12-17 03:36:41,630 [wrapper] Pilot exit status: 0
[2025-12-16 22:36:41] 2025-12-17 03:36:41,679 [wrapper] pandaids: 6933463282
[2025-12-16 22:36:41] 2025-12-17 03:36:41,806 [wrapper] cleanup supervisor_pilot 1307410 3896412
[2025-12-16 22:36:41] 2025-12-17 03:36:41,809 [wrapper] Test setup, not cleaning
[2025-12-16 22:36:41] 2025-12-17 03:36:41,812 [wrapper] apfmon messages muted
[2025-12-16 22:36:41] 2025-12-17 03:36:41,817 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:36:41] 2025-12-17 03:36:41,821 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:36:41]  *** Error codes and diagnostics ***
[2025-12-16 22:36:41]     "exeErrorCode": 0,
[2025-12-16 22:36:41]     "exeErrorDiag": "",
[2025-12-16 22:36:41]     "pilotErrorCode": 0,
[2025-12-16 22:36:41]     "pilotErrorDiag": "",
[2025-12-16 22:36:41]  *** Listing of results directory ***
[2025-12-16 22:36:41] total 381704
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 15:04 queuedata.json
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 15:04 pilot3.tar.gz
[2025-12-16 22:36:41] -rwx------. 1 boincer umatlas     36322 Dec 16 15:04 runpilot2-wrapper.sh
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas       100 Dec 16 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:36:41] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 20:02 run_atlas
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas       105 Dec 16 20:02 job.xml
[2025-12-16 22:36:41] -rw-r--r--. 2 boincer umatlas 198670095 Dec 16 20:02 EVNT.47899040._000144.pool.root.1
[2025-12-16 22:36:41] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 20:02 shared
[2025-12-16 22:36:41] -rw-r--r--. 2 boincer umatlas    592388 Dec 16 20:02 input.tar.gz
[2025-12-16 22:36:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:02 start_atlas.sh
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas         0 Dec 16 20:02 boinc_lockfile
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas      2495 Dec 16 20:02 pandaJob.out
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas        57 Dec 16 20:02 setup.sh.local
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas    987401 Dec 16 20:03 agis_schedconf.cvmfs.json
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas   1516240 Dec 16 20:03 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:36:41] drwx------. 5 boincer umatlas      4096 Dec 16 20:03 pilot3
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas      6943 Dec 16 22:30 init_data.xml
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas 185023370 Dec 16 22:33 HITS.47899042._003760.pool.root.1
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas       529 Dec 16 22:33 boinc_task_state.xml
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas      1045 Dec 16 22:35 memory_monitor_summary.json
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas    399477 Dec 16 22:35 log.47899042._003760.job.log.tgz.1
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas      7785 Dec 16 22:35 heartbeat.json
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas        95 Dec 16 22:36 pilot_heartbeat.json
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas      5010 Dec 16 22:36 pilotlog.txt
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas        27 Dec 16 22:36 wrapper_checkpoint.txt
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 22:36 boinc_mmap_file
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas   1225285 Dec 16 22:36 log.47899042._003760.job.log.1
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas       357 Dec 16 22:36 output.list
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas       620 Dec 16 22:36 runtime_log
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas   1648640 Dec 16 22:36 result.tar.gz
[2025-12-16 22:36:41] -rw-------. 1 boincer umatlas       656 Dec 16 22:36 slwLDmxSqp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW4VKDmb3x6un.diag
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas      9337 Dec 16 22:36 runtime_log.err
[2025-12-16 22:36:41] -rw-r--r--. 1 boincer umatlas     21259 Dec 16 22:36 stderr.txt
[2025-12-16 22:36:42] HITS file was successfully produced:
[2025-12-16 22:36:42] -rw-------. 1 boincer umatlas 185023370 Dec 16 22:33 shared/HITS.pool.root.1
[2025-12-16 22:36:42]  *** Contents of shared directory: ***
[2025-12-16 22:36:42] total 376916
[2025-12-16 22:36:42] -rw-r--r--. 2 boincer umatlas 198670095 Dec 16 20:02 ATLAS.root_0
[2025-12-16 22:36:42] -rw-r--r--. 2 boincer umatlas    592388 Dec 16 20:02 input.tar.gz
[2025-12-16 22:36:42] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:02 start_atlas.sh
[2025-12-16 22:36:42] -rw-------. 1 boincer umatlas 185023370 Dec 16 22:33 HITS.pool.root.1
[2025-12-16 22:36:42] -rw-------. 1 boincer umatlas   1648640 Dec 16 22:36 result.tar.gz
22:36:43 (3891566): run_atlas exited; CPU time 32045.460447
22:36:43 (3891566): called boinc_finish(0)

</stderr_txt>
]]>

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