Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:45:54 (2659581): wrapper (7.7.26015): starting
20:45:54 (2659581): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 20:45:54] Arguments: --nthreads 8
[2025-12-16 20:45:54] Threads: 8
[2025-12-16 20:45:54] Checking for CVMFS
[2025-12-16 20:45:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:45:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:45:56] 2.13.2.0 6751 63943 238944 154094 0 508 40334889 40960000 26973 16776704 0 226008481 99.581 280408455 37185 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 20:45:56] CVMFS is ok
[2025-12-16 20:45:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:45:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:45:56] Further information can be found at the LHC@home message board.
[2025-12-16 20:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:45:56] Checking for apptainer binary...
[2025-12-16 20:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:45:56] Running /usr/bin/apptainer --version
[2025-12-16 20:45:56] apptainer version 1.4.4-1.el9
[2025-12-16 20:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:45:56] c-212-7.aglt2.org
[2025-12-16 20:45:56] apptainer works
[2025-12-16 20:45:56] Set ATHENA_PROC_NUMBER=8
[2025-12-16 20:45:56] Set ATHENA_CORE_NUMBER=8
[2025-12-16 20:45:57] Starting ATLAS job with PandaID=6929784057
[2025-12-16 20:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:21:41]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:21:41] 2025-12-17 04:20:57,903 | INFO     | .. there are 24 such processes running
[2025-12-16 23:21:41] 2025-12-17 04:20:58,906 | INFO     | time since job start (9279s) is within the limit (174528.0s)
[2025-12-16 23:21:41] 2025-12-17 04:21:00,116 | INFO     | monitor loop #624: job 0:6929784057 is in state 'finished'
[2025-12-16 23:21:41] 2025-12-17 04:21:00,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:21:41] 2025-12-17 04:21:00,914 | INFO     | time since job start (9281s) is within the limit (174528.0s)
[2025-12-16 23:21:41] 2025-12-17 04:21:02,621 | INFO     | monitor loop #625: job 0:6929784057 is in state 'finished'
[2025-12-16 23:21:41] 2025-12-17 04:21:02,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:21:41] 2025-12-17 04:21:02,921 | INFO     | time since job start (9283s) is within the limit (174528.0s)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,290 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-16 23:21:41] 2025-12-17 04:21:03,295 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3099.4406979166665
[2025-12-16 23:21:41] 2025-12-17 04:21:03,310 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929784057/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,311 | INFO     | extracted standard info from prmon json
[2025-12-16 23:21:41] 2025-12-17 04:21:03,311 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:21:41] 2025-12-17 04:21:03,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:21:41] 2025-12-17 04:21:03,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:21:41] 2025-12-17 04:21:03,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:21:41] 2025-12-17 04:21:03,315 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:21:41] 2025-12-17 04:21:03,315 | INFO     | sum of square deviations: 1067563695.046357
[2025-12-16 23:21:41] 2025-12-17 04:21:03,342 | INFO     | sum of deviations: -14703584872.238405
[2025-12-16 23:21:41] 2025-12-17 04:21:03,342 | INFO     | mean x: 1765940604.0794702
[2025-12-16 23:21:41] 2025-12-17 04:21:03,342 | INFO     | mean y: 2550666.0198675497
[2025-12-16 23:21:41] 2025-12-17 04:21:03,342 | INFO     | intersect: 24324900397.374245
[2025-12-16 23:21:41] 2025-12-17 04:21:03,342 | INFO     | chi2: 1.606929618914099
[2025-12-16 23:21:41] 2025-12-17 04:21:03,343 | INFO     | sum of square deviations: 964988687.513698
[2025-12-16 23:21:41] 2025-12-17 04:21:03,343 | INFO     | sum of deviations: -13977659006.075338
[2025-12-16 23:21:41] 2025-12-17 04:21:03,343 | INFO     | mean x: 1765940451.5821917
[2025-12-16 23:21:41] 2025-12-17 04:21:03,343 | INFO     | mean y: 2551746.0479452056
[2025-12-16 23:21:41] 2025-12-17 04:21:03,344 | INFO     | intersect: 25581829282.293873
[2025-12-16 23:21:41] 2025-12-17 04:21:03,344 | INFO     | chi2: 1.6037627959771346
[2025-12-16 23:21:41] 2025-12-17 04:21:03,344 | INFO     | current chi2=1.6037627959771346 (change=0.19707290846405395 %)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,344 | INFO     | right removable region: 145
[2025-12-16 23:21:41] 2025-12-17 04:21:03,344 | INFO     | sum of square deviations: 964981367.513698
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | sum of deviations: -33987689598.534252
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | mean x: 1765940756.5821917
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | mean y: 2578783.794520548
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | intersect: 62200926135.060104
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | chi2: 0.2648841125905525
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | current chi2=0.2648841125905525 (change=83.51613477822688 %)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,345 | INFO     | sum of square deviations: 869189864.9787221
[2025-12-16 23:21:41] 2025-12-17 04:21:03,349 | INFO     | sum of deviations: -29353773393.063816
[2025-12-16 23:21:41] 2025-12-17 04:21:03,349 | INFO     | mean x: 1765940909.0851064
[2025-12-16 23:21:41] 2025-12-17 04:21:03,349 | INFO     | mean y: 2571339.5886524823
[2025-12-16 23:21:41] 2025-12-17 04:21:03,349 | INFO     | intersect: 59640898199.38735
[2025-12-16 23:21:41] 2025-12-17 04:21:03,349 | INFO     | chi2: 0.25280951591973805
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | current chi2=0.25280951591973805 (change=4.558445031952102 %)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | left removable region: 20
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | sum of square deviations: 605598982.0320001
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | sum of deviations: -14670146183.664001
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | mean x: 1765941031.088
[2025-12-16 23:21:41] 2025-12-17 04:21:03,350 | INFO     | mean y: 2547684.424
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | intersect: 42781042771.825554
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | chi2: 0.18329945271103196
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | current memory leak: -24.22 B/s (using 125 data points, chi2=0.18)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | could have reported an average CPU frequency of 3143 MHz (9 samples)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | ..............................
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | . Timing measurements:
[2025-12-16 23:21:41] 2025-12-17 04:21:03,351 | INFO     | . get job = 0 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . initial setup = 4 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . payload setup = 15 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . stage-in = 0 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . payload execution = 9220 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . stage-out = 2 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | . log creation = 0 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,352 | INFO     | ..............................
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | 
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | job summary report
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | --------------------------------------------------
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | PanDA job id: 6929784057
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | task id: 47898763
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | errors: (none)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:21:41] 2025-12-17 04:21:03,473 | INFO     | pilot state: finished 
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | transexitcode: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | exeerrorcode: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | exeerrordiag: 
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | exitcode: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | exitmsg: OK
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | cpuconsumptiontime: 44336 s
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | nevents: 400
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | neventsw: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | pid: 2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | pgrp: 2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | corecount: 8
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | event service: False
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | sizes: {0: 2283130, 1: 2283986, 9: 2284248, 12: 2284276, 9239: 2312726, 9240: 2312725, 9243: 2321907, 9244: 2321963, 9261: 2322221}
[2025-12-16 23:21:41] 2025-12-17 04:21:03,474 | INFO     | --------------------------------------------------
[2025-12-16 23:21:41] 2025-12-17 04:21:03,475 | INFO     | 
[2025-12-16 23:21:41] 2025-12-17 04:21:03,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 23:21:41] 2025-12-17 04:21:03,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,569 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | job 6929784057 has completed (purged errors)
[2025-12-16 23:21:41] 2025-12-17 04:21:03,571 | INFO     | overall cleanup function is called
[2025-12-16 23:21:41] 2025-12-17 04:21:04,585 | INFO     | --- collectZombieJob: --- 10, [2671769]
[2025-12-16 23:21:41] 2025-12-17 04:21:04,585 | INFO     | zombie collector waiting for pid 2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:04,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:21:41] 2025-12-17 04:21:04,585 | INFO     | collected zombie processes
[2025-12-16 23:21:41] 2025-12-17 04:21:04,585 | INFO     | will attempt to kill all subprocesses of pid=2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:05,263 | INFO     | process IDs to be killed: [2671769] (in reverse order)
[2025-12-16 23:21:41] 2025-12-17 04:21:05,493 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:21:41] 2025-12-17 04:21:05,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:21:41] 2025-12-17 04:21:05,529 | INFO     | did not find any defunct processes belonging to 2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:05,564 | INFO     | did not find any defunct processes belonging to 2671769
[2025-12-16 23:21:41] 2025-12-17 04:21:05,564 | INFO     | ready for new job
[2025-12-16 23:21:41] 2025-12-17 04:21:05,564 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:21:41] 2025-12-17 04:21:05,570 | INFO     | ***************************************
[2025-12-16 23:21:41] 2025-12-17 04:21:05,570 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:21:41] 2025-12-17 04:21:05,571 | INFO     | ***************************************
[2025-12-16 23:21:41] 2025-12-17 04:21:05,571 | INFO     | 
[2025-12-16 23:21:41] 2025-12-17 04:21:05,579 | INFO     | architecture information:
[2025-12-16 23:21:41] 2025-12-17 04:21:05,581 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:21:41] 2025-12-17 04:21:05,629 | INFO     | cat /etc/os-release:
[2025-12-16 23:21:41] NAME="CentOS Linux"
[2025-12-16 23:21:41] VERSION="7 (Core)"
[2025-12-16 23:21:41] ID="centos"
[2025-12-16 23:21:41] ID_LIKE="rhel fedora"
[2025-12-16 23:21:41] VERSION_ID="7"
[2025-12-16 23:21:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:21:41] ANSI_COLOR="0;31"
[2025-12-16 23:21:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:21:41] HOME_URL="https://www.centos.org/"
[2025-12-16 23:21:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:21:41] 
[2025-12-16 23:21:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:21:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:21:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:21:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:21:41] 
[2025-12-16 23:21:41] 2025-12-17 04:21:05,629 | INFO     | ***************************************
[2025-12-16 23:21:41] 2025-12-17 04:21:06,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 23:21:41] 2025-12-17 04:21:06,160 | INFO     | sufficient remaining disk space (127417712640 B)
[2025-12-16 23:21:41] 2025-12-17 04:21:06,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:21:41] 2025-12-17 04:21:06,160 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:21:41] 2025-12-17 04:21:06,160 | INFO     | update_server=False
[2025-12-16 23:21:41] 2025-12-17 04:21:06,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:21:41] 2025-12-17 04:21:06,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:21:41] 2025-12-17 04:21:06,162 | INFO     | aborting loop
[2025-12-16 23:21:41] 2025-12-17 04:21:06,386 | INFO     | all payload control threads have been joined
[2025-12-16 23:21:41] 2025-12-17 04:21:06,545 | INFO     | all data control threads have been joined
[2025-12-16 23:21:41] 2025-12-17 04:21:06,668 | INFO     | all job control threads have been joined
[2025-12-16 23:21:41] 2025-12-17 04:21:07,168 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,170 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,400 | INFO     | [payload] control thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,551 | INFO     | [data] control thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:21:41] 2025-12-17 04:21:07,674 | INFO     | [job] control thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,723 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,835 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:07,836 | INFO     | [job] validate thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:08,016 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:08,374 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:08,375 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:08,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:21:41] 2025-12-17 04:21:08,597 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:09,496 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:09,663 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:09,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:21:41] 2025-12-17 04:21:13,673 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:16,969 | INFO     | job.realtimelogging is not enabled
[2025-12-16 23:21:41] 2025-12-17 04:21:17,975 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:21:41] 2025-12-17 04:21:35,011 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:21:41] 2025-12-17 04:21:35,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835208365888)>', '<ExcThread(monitor, started 139834706343680)>']
[2025-12-16 23:21:41] 2025-12-17 04:21:37,281 | INFO     | PID=2663405 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 23:21:41] 2025-12-17 04:21:37,281 | INFO     | .. there are 24 such processes running
[2025-12-16 23:21:41] 2025-12-17 04:21:37,281 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:21:41] 2025-12-17 04:21:37,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:21:41] 2025-12-17 04:21:37,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:21:41] 2025-12-17 04:21:37,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:21:41] 2025-12-17 04:21:37,282 | INFO     | [monitor] control thread has ended
[2025-12-16 23:21:41] 2025-12-17 04:21:40,411 | INFO     | all workflow threads have been joined
[2025-12-16 23:21:41] 2025-12-17 04:21:40,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:21:41] 2025-12-17 04:21:40,414 | INFO     | traces error code: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:40,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:21:41] 2025-12-17 04:21:40,994 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:21:41] 2025-12-17 04:21:41,006 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:21:41] 2025-12-17 04:21:41,018 [wrapper] pilotpid: 2663405
[2025-12-16 23:21:41] 2025-12-17 04:21:41,030 [wrapper] Pilot exit status: 0
[2025-12-16 23:21:41] 2025-12-17 04:21:41,173 [wrapper] pandaids: 6929784057
[2025-12-16 23:21:41] 2025-12-17 04:21:41,270 [wrapper] cleanup supervisor_pilot 3179760 2663406
[2025-12-16 23:21:41] 2025-12-17 04:21:41,273 [wrapper] Test setup, not cleaning
[2025-12-16 23:21:41] 2025-12-17 04:21:41,276 [wrapper] apfmon messages muted
[2025-12-16 23:21:41] 2025-12-17 04:21:41,278 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:21:41] 2025-12-17 04:21:41,280 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:21:41]  *** Error codes and diagnostics ***
[2025-12-16 23:21:41]     "exeErrorCode": 0,
[2025-12-16 23:21:41]     "exeErrorDiag": "",
[2025-12-16 23:21:41]     "pilotErrorCode": 0,
[2025-12-16 23:21:41]     "pilotErrorDiag": "",
[2025-12-16 23:21:41]  *** Listing of results directory ***
[2025-12-16 23:21:41] total 438952
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-16 23:21:41] -rwx------. 1 boincer umatlas     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 08:27 queuedata.json
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas       100 Dec 16 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:21:41] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 20:45 run_atlas
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas       105 Dec 16 20:45 job.xml
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas 223029438 Dec 16 20:45 EVNT.47898761._000679.pool.root.1
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:45 start_atlas.sh
[2025-12-16 23:21:41] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 20:45 shared
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas    592395 Dec 16 20:45 input.tar.gz
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas         0 Dec 16 20:45 boinc_lockfile
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas      2508 Dec 16 20:45 pandaJob.out
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas        57 Dec 16 20:45 setup.sh.local
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas    987393 Dec 16 20:46 agis_schedconf.cvmfs.json
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas   1516240 Dec 16 20:46 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:21:41] drwx------. 5 boincer umatlas      4096 Dec 16 20:46 pilot3
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas 219196780 Dec 16 23:19 HITS.47898763._017003.pool.root.1
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas       529 Dec 16 23:20 boinc_task_state.xml
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas      6946 Dec 16 23:20 init_data.xml
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas      1047 Dec 16 23:20 memory_monitor_summary.json
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas    407493 Dec 16 23:20 log.47898763._017003.job.log.tgz.1
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas        95 Dec 16 23:20 pilot_heartbeat.json
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas      7797 Dec 16 23:21 heartbeat.json
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 23:21 boinc_mmap_file
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas        27 Dec 16 23:21 wrapper_checkpoint.txt
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas      4897 Dec 16 23:21 pilotlog.txt
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas   1265031 Dec 16 23:21 log.47898763._017003.job.log.1
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas       357 Dec 16 23:21 output.list
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas       620 Dec 16 23:21 runtime_log
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas   1689600 Dec 16 23:21 result.tar.gz
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas      9337 Dec 16 23:21 runtime_log.err
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas       656 Dec 16 23:21 AnqKDmsmNp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU1XKDmcLegin.diag
[2025-12-16 23:21:41] -rw-r--r--. 1 boincer umatlas     21353 Dec 16 23:21 stderr.txt
[2025-12-16 23:21:41] HITS file was successfully produced:
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas 219196780 Dec 16 23:19 shared/HITS.pool.root.1
[2025-12-16 23:21:41]  *** Contents of shared directory: ***
[2025-12-16 23:21:41] total 434120
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas 223029438 Dec 16 20:45 ATLAS.root_0
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:45 start_atlas.sh
[2025-12-16 23:21:41] -rw-r--r--. 2 boincer umatlas    592395 Dec 16 20:45 input.tar.gz
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas 219196780 Dec 16 23:19 HITS.pool.root.1
[2025-12-16 23:21:41] -rw-------. 1 boincer umatlas   1689600 Dec 16 23:21 result.tar.gz
23:21:42 (2659581): run_atlas exited; CPU time 44612.292571
23:21:42 (2659581): called boinc_finish(0)

</stderr_txt>
]]>

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