Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:36:13 (700714): wrapper (7.7.26015): starting
21:36:13 (700714): wrapper: running run_atlas (--nthreads 11)
[2025-12-16 21:36:13] Arguments: --nthreads 11
[2025-12-16 21:36:13] Threads: 11
[2025-12-16 21:36:13] Checking for CVMFS
[2025-12-16 21:36:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 21:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 21:36:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 21:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 21:36:16] 2.13.2.0 9432 63489 251468 154095 0 459 35973236 39288832 9293 16776704 0 51278324 99.674 47009027 38638 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 21:36:16] CVMFS is ok
[2025-12-16 21:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 21:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 21:36:16] Further information can be found at the LHC@home message board.
[2025-12-16 21:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 21:36:16] Checking for apptainer binary...
[2025-12-16 21:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 21:36:16] Running /usr/bin/apptainer --version
[2025-12-16 21:36:16] apptainer version 1.4.4-1.el9
[2025-12-16 21:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 21:36:18] c-211-5.aglt2.org
[2025-12-16 21:36:18] apptainer works
[2025-12-16 21:36:18] Set ATHENA_PROC_NUMBER=11
[2025-12-16 21:36:18] Set ATHENA_CORE_NUMBER=11
[2025-12-16 21:36:18] Starting ATLAS job with PandaID=6929508302
[2025-12-16 21:36:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 03:47:22]  *** The last 200 lines of the pilot log: ***
[2025-12-17 03:47:22] 2025-12-17 05:33:47,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:47:22] 2025-12-17 05:33:47,556 | INFO     | time since job start (10582s) is within the limit (174528.0s)
[2025-12-17 03:47:22] 2025-12-17 05:33:49,596 | INFO     | time since job start (10584s) is within the limit (174528.0s)
[2025-12-17 03:47:22] 2025-12-17 05:33:49,654 | INFO     | monitor loop #729: job 0:6929508302 is in state 'finished'
[2025-12-17 03:47:22] 2025-12-17 05:33:49,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:47:22] 2025-12-17 05:33:51,603 | INFO     | time since job start (10586s) is within the limit (174528.0s)
[2025-12-17 03:47:22] 2025-12-17 05:33:52,215 | INFO     | monitor loop #730: job 0:6929508302 is in state 'finished'
[2025-12-17 03:47:22] 2025-12-17 05:33:52,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,446 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 03:47:22] 2025-12-17 05:33:53,451 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1645999999996
[2025-12-17 03:47:22] 2025-12-17 05:33:53,467 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929508302/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,472 | INFO     | extracted standard info from prmon json
[2025-12-17 03:47:22] 2025-12-17 05:33:53,472 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 03:47:22] 2025-12-17 05:33:53,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 03:47:22] 2025-12-17 05:33:53,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 03:47:22] 2025-12-17 05:33:53,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 03:47:22] 2025-12-17 05:33:53,476 | INFO     | fitting pss+swap vs Time
[2025-12-17 03:47:22] 2025-12-17 05:33:53,476 | INFO     | sum of square deviations: 1550280437.5204673
[2025-12-17 03:47:22] 2025-12-17 05:33:53,477 | INFO     | sum of deviations: 14258020115.426905
[2025-12-17 03:47:22] 2025-12-17 05:33:53,477 | INFO     | mean x: 1765944362.4152048
[2025-12-17 03:47:22] 2025-12-17 05:33:53,477 | INFO     | mean y: 2585953.374269006
[2025-12-17 03:47:22] 2025-12-17 05:33:53,477 | INFO     | intersect: -16238907929.056475
[2025-12-17 03:47:22] 2025-12-17 05:33:53,478 | INFO     | chi2: 3.3733162380934245
[2025-12-17 03:47:22] 2025-12-17 05:33:53,478 | INFO     | sum of square deviations: 1418213754.819273
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | sum of deviations: 25336135575.843346
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | mean x: 1765944209.9156628
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | mean y: 2598435.060240964
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | intersect: -31545679650.49564
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | chi2: 2.6681776873859957
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | current chi2=2.6681776873859957 (change=20.903422654081442 %)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,479 | INFO     | right removable region: 165
[2025-12-17 03:47:22] 2025-12-17 05:33:53,480 | INFO     | sum of square deviations: 1418149457.614458
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | sum of deviations: -27288916184.650597
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | mean x: 1765944514.9518073
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | mean y: 2633577.6686746986
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | intersect: 33984039131.58496
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | chi2: 0.9564277240100033
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | current chi2=0.9564277240100033 (change=71.64725580099868 %)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,481 | INFO     | sum of square deviations: 1293749190.211184
[2025-12-17 03:47:22] 2025-12-17 05:33:53,482 | INFO     | sum of deviations: -30613391722.888184
[2025-12-17 03:47:22] 2025-12-17 05:33:53,482 | INFO     | mean x: 1765944667.484472
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | mean y: 2637540.844720497
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | intersect: 41789373544.770615
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | chi2: 0.8923849813316396
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | current chi2=0.8923849813316396 (change=6.696035787194926 %)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | left removable region: 20
[2025-12-17 03:47:22] 2025-12-17 05:33:53,483 | INFO     | sum of square deviations: 945222409.3517259
[2025-12-17 03:47:22] 2025-12-17 05:33:53,484 | INFO     | sum of deviations: -6356092252.924136
[2025-12-17 03:47:22] 2025-12-17 05:33:53,484 | INFO     | mean x: 1765944789.3586206
[2025-12-17 03:47:22] 2025-12-17 05:33:53,484 | INFO     | mean y: 2634529.979310345
[2025-12-17 03:47:22] 2025-12-17 05:33:53,484 | INFO     | intersect: 11877625943.30427
[2025-12-17 03:47:22] 2025-12-17 05:33:53,485 | INFO     | chi2: 0.0804028546951884
[2025-12-17 03:47:22] 2025-12-17 05:33:53,485 | INFO     | current memory leak: -6.72 B/s (using 145 data points, chi2=0.08)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,485 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,485 | INFO     | ..............................
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . Timing measurements:
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . get job = 1 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . initial setup = 6 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . payload setup = 39 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . stage-in = 1 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . payload execution = 10455 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . stage-out = 2 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | . log creation = 0 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,486 | INFO     | ..............................
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | 
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | job summary report
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | --------------------------------------------------
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | PanDA job id: 6929508302
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | task id: 47886933
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | errors: (none)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | pilot state: finished 
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | transexitcode: 0
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | exeerrorcode: 0
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | exeerrordiag: 
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | exitcode: 0
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | exitmsg: OK
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | cpuconsumptiontime: 50952 s
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | nevents: 400
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | neventsw: 0
[2025-12-17 03:47:22] 2025-12-17 05:33:53,600 | INFO     | pid: 712590
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | pgrp: 712590
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | corecount: 11
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | event service: False
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | sizes: {0: 2283137, 1: 2283822, 2: 2283993, 3: 2284021, 14: 2284049, 26: 2284339, 37: 2284495, 10499: 2313461, 10502: 2322515, 10528: 2322717}
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | --------------------------------------------------
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | 
[2025-12-17 03:47:22] 2025-12-17 05:33:53,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-17 03:47:22] 2025-12-17 05:33:53,610 | INFO     | time since job start (10588s) is within the limit (174528.0s)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,646 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 03:47:22] 2025-12-17 05:33:53,646 | INFO     | job 6929508302 has completed (purged errors)
[2025-12-17 03:47:22] 2025-12-17 05:33:53,646 | INFO     | overall cleanup function is called
[2025-12-17 03:47:22] 2025-12-17 05:33:54,658 | INFO     | --- collectZombieJob: --- 10, [712590]
[2025-12-17 03:47:22] 2025-12-17 05:33:54,659 | INFO     | zombie collector waiting for pid 712590
[2025-12-17 03:47:22] 2025-12-17 05:33:54,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 03:47:22] 2025-12-17 05:33:54,660 | INFO     | collected zombie processes
[2025-12-17 03:47:22] 2025-12-17 05:33:54,660 | INFO     | will attempt to kill all subprocesses of pid=712590
[2025-12-17 03:47:22] 2025-12-17 05:33:55,094 | INFO     | process IDs to be killed: [712590] (in reverse order)
[2025-12-17 03:47:22] 2025-12-17 05:33:55,166 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 03:47:22] 2025-12-17 05:33:55,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 03:47:22] 2025-12-17 05:33:55,174 | INFO     | did not find any defunct processes belonging to 712590
[2025-12-17 03:47:22] 2025-12-17 05:33:55,182 | INFO     | did not find any defunct processes belonging to 712590
[2025-12-17 03:47:22] 2025-12-17 05:33:55,182 | INFO     | ready for new job
[2025-12-17 03:47:22] 2025-12-17 05:33:55,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 03:47:22] 2025-12-17 05:33:55,184 | INFO     | ***************************************
[2025-12-17 03:47:22] 2025-12-17 05:33:55,184 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 03:47:22] 2025-12-17 05:33:55,185 | INFO     | ***************************************
[2025-12-17 03:47:22] 2025-12-17 05:33:55,185 | INFO     | 
[2025-12-17 03:47:22] 2025-12-17 05:33:55,187 | INFO     | architecture information:
[2025-12-17 03:47:22] 2025-12-17 05:33:55,187 | INFO     | executing command: cat /etc/os-release
[2025-12-17 03:47:22] 2025-12-17 05:33:55,225 | INFO     | cat /etc/os-release:
[2025-12-17 03:47:22] NAME="CentOS Linux"
[2025-12-17 03:47:22] VERSION="7 (Core)"
[2025-12-17 03:47:22] ID="centos"
[2025-12-17 03:47:22] ID_LIKE="rhel fedora"
[2025-12-17 03:47:22] VERSION_ID="7"
[2025-12-17 03:47:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 03:47:22] ANSI_COLOR="0;31"
[2025-12-17 03:47:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 03:47:22] HOME_URL="https://www.centos.org/"
[2025-12-17 03:47:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 03:47:22] 
[2025-12-17 03:47:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 03:47:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 03:47:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 03:47:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 03:47:22] 
[2025-12-17 03:47:22] 2025-12-17 05:33:55,225 | INFO     | ***************************************
[2025-12-17 03:47:22] 2025-12-17 05:33:55,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-17 03:47:22] 2025-12-17 05:33:55,798 | INFO     | sufficient remaining disk space (52719255552 B)
[2025-12-17 03:47:22] 2025-12-17 05:33:55,798 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | INFO     | update_server=False
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | INFO     | aborting loop
[2025-12-17 03:47:22] 2025-12-17 05:33:55,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 03:47:22] 2025-12-17 05:33:56,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 03:47:22] 2025-12-17 05:33:56,470 | INFO     | all data control threads have been joined
[2025-12-17 03:47:22] 2025-12-17 05:33:56,805 | INFO     | [job] retrieve thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:56,805 | INFO     | [job] job monitor thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:56,823 | INFO     | all payload control threads have been joined
[2025-12-17 03:47:22] 2025-12-17 05:33:56,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,008 | INFO     | all job control threads have been joined
[2025-12-17 03:47:22] 2025-12-17 05:33:57,017 | INFO     | [data] copytool_in thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,017 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,120 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,218 | INFO     | [job] validate thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,477 | INFO     | [data] control thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,678 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,806 | INFO     | [data] copytool_out thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,829 | INFO     | [payload] control thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:57,909 | INFO     | [payload] validate_post thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:58,014 | INFO     | [job] control thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:58,069 | INFO     | [payload] failed_post thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:33:58,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 03:47:22] 2025-12-17 05:33:59,624 | INFO     | [job] queue monitor thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:34:00,271 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 03:47:22] 2025-12-17 05:34:27,511 | INFO     | PID=704698 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 03:47:22] 2025-12-17 05:34:27,511 | INFO     | .. there are 8 such processes running
[2025-12-17 03:47:22] 2025-12-17 05:34:27,511 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 03:47:22] 2025-12-17 05:34:27,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 03:47:22] 2025-12-17 05:34:27,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 03:47:22] 2025-12-17 05:34:42,509 | INFO     | [monitor] cgroup control has ended
[2025-12-17 03:47:22] 2025-12-17 05:34:44,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837736531776)>', '<ExcThread(monitor, started 139837382305536)>']
[2025-12-17 03:47:22] 2025-12-17 05:34:44,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 03:47:22] 2025-12-17 05:34:44,649 | INFO     | [monitor] control thread has ended
[2025-12-17 03:47:22] 2025-12-17 05:34:49,518 | INFO     | all workflow threads have been joined
[2025-12-17 03:47:22] 2025-12-17 05:34:49,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 03:47:22] 2025-12-17 05:34:49,519 | INFO     | traces error code: 0
[2025-12-17 03:47:22] 2025-12-17 05:34:49,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 03:47:22] 2025-12-17 05:34:49,825 [wrapper] ==== pilot stdout END ====
[2025-12-17 03:47:22] 2025-12-17 05:34:49,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 03:47:22] 2025-12-17 05:34:49,829 [wrapper] pilotpid: 704698
[2025-12-17 03:47:22] 2025-12-17 05:34:49,831 [wrapper] Pilot exit status: 0
[2025-12-17 03:47:22] 2025-12-17 05:34:49,868 [wrapper] pandaids: 6929508302
[2025-12-17 03:47:22] 2025-12-17 05:34:49,947 [wrapper] cleanup supervisor_pilot  958706 704699
[2025-12-17 03:47:22] 2025-12-17 05:34:49,950 [wrapper] Test setup, not cleaning
[2025-12-17 03:47:22] 2025-12-17 05:34:49,953 [wrapper] apfmon messages muted
[2025-12-17 03:47:22] 2025-12-17 05:34:49,956 [wrapper] ==== wrapper stdout END ====
[2025-12-17 03:47:22] 2025-12-17 05:34:49,959 [wrapper] ==== wrapper stderr END ====
[2025-12-17 03:47:22]  *** Error codes and diagnostics ***
[2025-12-17 03:47:22]     "exeErrorCode": 0,
[2025-12-17 03:47:22]     "exeErrorDiag": "",
[2025-12-17 03:47:22]     "pilotErrorCode": 0,
[2025-12-17 03:47:22]     "pilotErrorDiag": "",
[2025-12-17 03:47:22]  *** Listing of results directory ***
[2025-12-17 03:47:22] total 343776
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 18:13 queuedata.json
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 18:13 pilot3.tar.gz
[2025-12-17 03:47:22] -rwx------. 1 boincer umatlas     36322 Dec 14 18:15 runpilot2-wrapper.sh
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas       100 Dec 16 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 03:47:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 21:36 run_atlas
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas       105 Dec 16 21:36 job.xml
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas 193984842 Dec 16 21:36 EVNT.47886929._000219.pool.root.1
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:36 start_atlas.sh
[2025-12-17 03:47:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 21:36 shared
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas    592399 Dec 16 21:36 input.tar.gz
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas         0 Dec 16 21:36 boinc_lockfile
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas      2513 Dec 16 21:36 pandaJob.out
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas        57 Dec 16 21:36 setup.sh.local
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas    987409 Dec 16 21:37 agis_schedconf.cvmfs.json
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas   1516240 Dec 16 21:37 agis_ddmendpoints.agis.ALL.json
[2025-12-17 03:47:22] drwx------. 5 boincer umatlas      4096 Dec 16 21:37 pilot3
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas 150371396 Dec 17 00:31 HITS.47886933._004581.pool.root.1
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas       530 Dec 17 00:32 boinc_task_state.xml
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas      1044 Dec 17 00:33 memory_monitor_summary.json
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas    449593 Dec 17 00:33 log.47886933._004581.job.log.tgz.1
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas        95 Dec 17 00:33 pilot_heartbeat.json
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas      7823 Dec 17 00:33 heartbeat.json
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas      4822 Dec 17 00:34 pilotlog.txt
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas   1429085 Dec 17 00:34 log.47886933._004581.job.log.1
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas       357 Dec 17 00:34 output.list
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas       620 Dec 17 00:34 runtime_log
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas   1894400 Dec 17 00:34 result.tar.gz
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas       654 Dec 17 00:34 u4UNDm7TAp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvYWKDmS4aIKm.diag
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas      9340 Dec 17 00:34 runtime_log.err
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas      6658 Dec 17 03:47 init_data.xml
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas        28 Dec 17 03:47 wrapper_checkpoint.txt
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 03:47 boinc_mmap_file
[2025-12-17 03:47:22] -rw-r--r--. 1 boincer umatlas     21428 Dec 17 03:47 stderr.txt
[2025-12-17 03:47:22] HITS file was successfully produced:
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas 150371396 Dec 17 00:31 shared/HITS.pool.root.1
[2025-12-17 03:47:22]  *** Contents of shared directory: ***
[2025-12-17 03:47:22] total 338744
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas 193984842 Dec 16 21:36 ATLAS.root_0
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 21:36 start_atlas.sh
[2025-12-17 03:47:22] -rw-r--r--. 2 boincer umatlas    592399 Dec 16 21:36 input.tar.gz
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas 150371396 Dec 17 00:31 HITS.pool.root.1
[2025-12-17 03:47:22] -rw-------. 1 boincer umatlas   1894400 Dec 17 00:34 result.tar.gz
03:47:24 (700714): run_atlas exited; CPU time 51108.686617
03:47:24 (700714): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN