Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:24 (456189): wrapper (7.7.26015): starting
05:04:24 (456189): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 05:04:24] Arguments: --nthreads 8
[2025-12-17 05:04:24] Threads: 8
[2025-12-17 05:04:24] Checking for CVMFS
[2025-12-17 05:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 05:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 05:04:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 05:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 05:04:24] 2.13.2.0 6987 1348 57892 154097 3 57 2330896 4097024 0 130560 0 1202376 99.993 49341 25008 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-17 05:04:24] CVMFS is ok
[2025-12-17 05:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 05:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 05:04:24] Further information can be found at the LHC@home message board.
[2025-12-17 05:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 05:04:24] Checking for apptainer binary...
[2025-12-17 05:04:24] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-17 05:04:24] apptainer is not installed, using version from CVMFS
[2025-12-17 05:04:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 05:04:24] pckeatlas02
[2025-12-17 05:04:24] apptainer works
[2025-12-17 05:04:24] Set ATHENA_PROC_NUMBER=8
[2025-12-17 05:04:24] Set ATHENA_CORE_NUMBER=8
[2025-12-17 05:04:24] Starting ATLAS job with PandaID=6931014600
[2025-12-17 05:04:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 06:28:04]  *** The last 200 lines of the pilot log: ***
[2025-12-17 06:28:04]  protocol_id=None
[2025-12-17 06:28:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-17 06:28:04]  replicas=None
[2025-12-17 06:28:04]  scope=mc23_13p6TeV
[2025-12-17 06:28:04]  status=None
[2025-12-17 06:28:04]  status_code=0
[2025-12-17 06:28:04]  storage_token=
[2025-12-17 06:28:04]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6931014600/log.47886933._007038.job.log.tgz.1
[2025-12-17 06:28:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/c2/log.47886933._007038.job.log.tgz.1
[2025-12-17 06:28:04]  workdir=None
[2025-12-17 06:28:04] ]
[2025-12-17 06:28:04] 2025-12-17 05:27:26,843 | INFO     | transferring file log.47886933._007038.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6931014600/log.47886933._007038.job.log.tgz.1 to /var/lib/boinc/slots
[2025-12-17 06:28:04] 2025-12-17 05:27:26,843 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6931014600/log.47886933._007038.job.log.tgz.1 /var/lib/boinc/slots/19/log.47886933._007038.j
[2025-12-17 06:28:04] 2025-12-17 05:27:26,851 | INFO     | adding to output.list: log.47886933._007038.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/c2/log.47886933._007038.job.log.tg
[2025-12-17 06:28:04] 2025-12-17 05:27:26,851 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 06:28:04] 2025-12-17 05:27:26,851 | INFO     | summary of transferred files:
[2025-12-17 06:28:04] 2025-12-17 05:27:26,851 | INFO     |  -- lfn=log.47886933._007038.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 06:28:04] 2025-12-17 05:27:26,851 | INFO     | stage-out finished correctly
[2025-12-17 06:28:04] 2025-12-17 05:27:27,091 | INFO     | time since job start (4979s) is within the limit (174528.0s)
[2025-12-17 06:28:04] 2025-12-17 05:27:27,096 | INFO     | monitor loop #379: job 0:6931014600 is in state 'finished'
[2025-12-17 06:28:04] 2025-12-17 05:27:27,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:28:04] 2025-12-17 05:27:28,133 | INFO     | PID=459951 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 06:28:04] 2025-12-17 05:27:29,133 | INFO     | time since job start (4981s) is within the limit (174528.0s)
[2025-12-17 06:28:04] 2025-12-17 05:27:29,599 | INFO     | monitor loop #380: job 0:6931014600 is in state 'finished'
[2025-12-17 06:28:04] 2025-12-17 05:27:29,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:28:04] 2025-12-17 05:27:30,319 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | job 6931014600 has state=finished
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | preparing for final server update for job 6931014600 in state='finished'
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | this job has now completed (state=finished)
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | log transfer has been attempted: DONE
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | job 6931014600 has finished - writing final server update
[2025-12-17 06:28:04] 2025-12-17 05:27:30,353 | INFO     | total number of processed events: 400 (read)
[2025-12-17 06:28:04] 2025-12-17 05:27:30,354 | INFO     | executing command: lscpu
[2025-12-17 06:28:04] 2025-12-17 05:27:30,362 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 06:28:04] 2025-12-17 05:27:31,139 | INFO     | time since job start (4983s) is within the limit (174528.0s)
[2025-12-17 06:28:04] 2025-12-17 05:27:32,101 | INFO     | monitor loop #381: job 0:6931014600 is in state 'finished'
[2025-12-17 06:28:04] 2025-12-17 05:27:32,102 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,075 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 06:28:04] 2025-12-17 05:27:33,076 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3875.805125
[2025-12-17 06:28:04] 2025-12-17 05:27:33,077 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6931014600/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,077 | INFO     | extracted standard info from prmon json
[2025-12-17 06:28:04] 2025-12-17 05:27:33,077 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 06:28:04] 2025-12-17 05:27:33,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 06:28:04] 2025-12-17 05:27:33,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 06:28:04] 2025-12-17 05:27:33,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 06:28:04] 2025-12-17 05:27:33,078 | INFO     | fitting pss+swap vs Time
[2025-12-17 06:28:04] 2025-12-17 05:27:33,078 | INFO     | sum of square deviations: 130793150.0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | sum of deviations: -745325084.0000001
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | mean x: 1765946849.0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | mean y: 2555264.3066666666
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | intersect: 10065807686.703869
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | chi2: 0.04343820719967767
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | current memory leak: -5.70 B/s (using 75 data points, chi2=0.04)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | could have reported an average CPU frequency of 3753 MHz (6 samples)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | ..............................
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . Timing measurements:
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . get job = 0 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . initial setup = 0 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . payload setup = 3 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . stage-in = 0 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . payload execution = 4957 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . stage-out = 0 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | . log creation = 0 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,079 | INFO     | ..............................
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | 
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | job summary report
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | --------------------------------------------------
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | PanDA job id: 6931014600
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | task id: 47886933
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | errors: (none)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | pilot state: finished 
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | transexitcode: 0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | exeerrorcode: 0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | exeerrordiag: 
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | exitcode: 0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | exitmsg: OK
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | cpuconsumptiontime: 37753 s
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | nevents: 400
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | neventsw: 0
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | pid: 467264
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | pgrp: 467264
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | corecount: 8
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | event service: False
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | sizes: {0: 2283795, 1: 2283994, 2: 2284256, 11: 2284284, 4964: 2310643, 4965: 2319643, 4969: 2319827, 4972: 2320021}
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | --------------------------------------------------
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | 
[2025-12-17 06:28:04] 2025-12-17 05:27:33,115 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-12-17 06:28:04] 2025-12-17 05:27:33,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | job 6931014600 has completed (purged errors)
[2025-12-17 06:28:04] 2025-12-17 05:27:33,125 | INFO     | overall cleanup function is called
[2025-12-17 06:28:04] 2025-12-17 05:27:34,131 | INFO     | --- collectZombieJob: --- 10, [467264]
[2025-12-17 06:28:04] 2025-12-17 05:27:34,131 | INFO     | zombie collector waiting for pid 467264
[2025-12-17 06:28:04] 2025-12-17 05:27:34,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 06:28:04] 2025-12-17 05:27:34,131 | INFO     | collected zombie processes
[2025-12-17 06:28:04] 2025-12-17 05:27:34,132 | INFO     | will attempt to kill all subprocesses of pid=467264
[2025-12-17 06:28:04] 2025-12-17 05:27:34,161 | INFO     | process IDs to be killed: [467264] (in reverse order)
[2025-12-17 06:28:04] 2025-12-17 05:27:34,177 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 06:28:04] 2025-12-17 05:27:34,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 06:28:04] 2025-12-17 05:27:34,178 | INFO     | did not find any defunct processes belonging to 467264
[2025-12-17 06:28:04] 2025-12-17 05:27:34,179 | INFO     | did not find any defunct processes belonging to 467264
[2025-12-17 06:28:04] 2025-12-17 05:27:34,179 | INFO     | ready for new job
[2025-12-17 06:28:04] 2025-12-17 05:27:34,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 06:28:04] 2025-12-17 05:27:34,179 | INFO     | ***************************************
[2025-12-17 06:28:04] 2025-12-17 05:27:34,180 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 06:28:04] 2025-12-17 05:27:34,180 | INFO     | ***************************************
[2025-12-17 06:28:04] 2025-12-17 05:27:34,180 | INFO     | 
[2025-12-17 06:28:04] 2025-12-17 05:27:34,180 | INFO     | architecture information:
[2025-12-17 06:28:04] 2025-12-17 05:27:34,180 | INFO     | executing command: cat /etc/os-release
[2025-12-17 06:28:04] 2025-12-17 05:27:34,185 | INFO     | cat /etc/os-release:
[2025-12-17 06:28:04] NAME="CentOS Linux"
[2025-12-17 06:28:04] VERSION="7 (Core)"
[2025-12-17 06:28:04] ID="centos"
[2025-12-17 06:28:04] ID_LIKE="rhel fedora"
[2025-12-17 06:28:04] VERSION_ID="7"
[2025-12-17 06:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 06:28:04] ANSI_COLOR="0;31"
[2025-12-17 06:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 06:28:04] HOME_URL="https://www.centos.org/"
[2025-12-17 06:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 06:28:04] 
[2025-12-17 06:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 06:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 06:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 06:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 06:28:04] 
[2025-12-17 06:28:04] 2025-12-17 05:27:34,185 | INFO     | ***************************************
[2025-12-17 06:28:04] 2025-12-17 05:27:34,688 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | INFO     | sufficient remaining disk space (116100431872 B)
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | INFO     | update_server=False
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 06:28:04] 2025-12-17 05:27:34,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:28:04] 2025-12-17 05:27:34,797 | INFO     | all data control threads have been joined
[2025-12-17 06:28:04] 2025-12-17 05:27:34,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 06:28:04] 2025-12-17 05:27:35,476 | INFO     | all payload control threads have been joined
[2025-12-17 06:28:04] 2025-12-17 05:27:35,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 06:28:04] 2025-12-17 05:27:35,615 | INFO     | aborting loop
[2025-12-17 06:28:04] 2025-12-17 05:27:35,701 | INFO     | [job] retrieve thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:35,701 | INFO     | [job] queue monitor thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:35,803 | INFO     | [data] control thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:35,848 | INFO     | [data] copytool_in thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,041 | INFO     | all job control threads have been joined
[2025-12-17 06:28:04] 2025-12-17 05:27:36,175 | INFO     | [payload] validate_post thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 06:28:04] 2025-12-17 05:27:36,429 | INFO     | [payload] failed_post thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,481 | INFO     | [payload] control thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,518 | INFO     | [monitor] cgroup control has ended
[2025-12-17 06:28:04] 2025-12-17 05:27:36,620 | INFO     | [job] job monitor thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,892 | INFO     | [job] validate thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,903 | INFO     | [data] copytool_out thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:36,963 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:37,017 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:37,041 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:37,046 | INFO     | [job] control thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:40,363 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:44,806 | INFO     | job.realtimelogging is not enabled
[2025-12-17 06:28:04] 2025-12-17 05:27:45,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 06:28:04] 2025-12-17 05:27:45,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320670390080)>', '<ExcThread(monitor, started 140320350115584)>']
[2025-12-17 06:28:04] 2025-12-17 05:27:50,927 | INFO     | all workflow threads have been joined
[2025-12-17 06:28:04] 2025-12-17 05:27:50,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 06:28:04] 2025-12-17 05:27:50,927 | INFO     | traces error code: 0
[2025-12-17 06:28:04] 2025-12-17 05:27:50,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 06:28:04] 2025-12-17 05:28:04,268 | INFO     | PID=459951 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 06:28:04] 2025-12-17 05:28:04,269 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 06:28:04] 2025-12-17 05:28:04,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 06:28:04] 2025-12-17 05:28:04,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 06:28:04] 2025-12-17 05:28:04,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 06:28:04] 2025-12-17 05:28:04,269 | INFO     | [monitor] control thread has ended
[2025-12-17 06:28:04] 2025-12-17 05:28:04,323 [wrapper] ==== pilot stdout END ====
[2025-12-17 06:28:04] 2025-12-17 05:28:04,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 06:28:04] 2025-12-17 05:28:04,326 [wrapper] pilotpid: 459951
[2025-12-17 06:28:04] 2025-12-17 05:28:04,327 [wrapper] Pilot exit status: 0
[2025-12-17 06:28:04] 2025-12-17 05:28:04,331 [wrapper] pandaids: 6931014600
[2025-12-17 06:28:04] 2025-12-17 05:28:04,339 [wrapper] cleanup supervisor_pilot  482967 459952
[2025-12-17 06:28:04] 2025-12-17 05:28:04,341 [wrapper] Test setup, not cleaning
[2025-12-17 06:28:04] 2025-12-17 05:28:04,342 [wrapper] apfmon messages muted
[2025-12-17 06:28:04] 2025-12-17 05:28:04,343 [wrapper] ==== wrapper stdout END ====
[2025-12-17 06:28:04] 2025-12-17 05:28:04,344 [wrapper] ==== wrapper stderr END ====
[2025-12-17 06:28:04]  *** Error codes and diagnostics ***
[2025-12-17 06:28:04]     "exeErrorCode": 0,
[2025-12-17 06:28:04]     "exeErrorDiag": "",
[2025-12-17 06:28:04]     "pilotErrorCode": 0,
[2025-12-17 06:28:04]     "pilotErrorDiag": "",
[2025-12-17 06:28:04]  *** Listing of results directory ***
[2025-12-17 06:28:04] total 331228
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc    579449 Dec 16 13:06 pilot3.tar.gz
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc      5112 Dec 16 13:07 queuedata.json
[2025-12-17 06:28:04] -rwx------. 1 boinc boinc     36322 Dec 16 13:08 runpilot2-wrapper.sh
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc       100 Dec 17 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 06:28:04] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 05:04 run_atlas
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc       105 Dec 17 05:04 job.xml
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc      6275 Dec 17 05:04 init_data.xml
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc 189656088 Dec 17 05:04 EVNT.47886929._000273.pool.root.1
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc     15847 Dec 17 05:04 start_atlas.sh
[2025-12-17 06:28:04] drwxrwx--x. 2 boinc boinc        68 Dec 17 05:04 shared
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc    592390 Dec 17 05:04 input.tar.gz
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc         0 Dec 17 05:04 boinc_lockfile
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc      2513 Dec 17 05:04 pandaJob.out
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc    987409 Dec 17 05:04 agis_schedconf.cvmfs.json
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc   1516240 Dec 17 05:04 agis_ddmendpoints.agis.ALL.json
[2025-12-17 06:28:04] drwx------. 5 boinc boinc      4096 Dec 17 05:04 pilot3
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc 143518038 Dec 17 06:27 HITS.47886933._007038.pool.root.1
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc      1014 Dec 17 06:27 memory_monitor_summary.json
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc    326932 Dec 17 06:27 log.47886933._007038.job.log.tgz.1
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc      7768 Dec 17 06:27 heartbeat.json
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc       529 Dec 17 06:27 boinc_task_state.xml
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc        27 Dec 17 06:28 wrapper_checkpoint.txt
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc      8192 Dec 17 06:28 boinc_mmap_file
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc       746 Dec 17 06:28 pilotlog.txt
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc        95 Dec 17 06:28 pilot_heartbeat.json
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc    728360 Dec 17 06:28 log.47886933._007038.job.log.1
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc       357 Dec 17 06:28 output.list
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc       620 Dec 17 06:28 runtime_log
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc   1075200 Dec 17 06:28 result.tar.gz
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc       650 Dec 17 06:28 tf3KDmr1ip8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9WVKDmkUagQm.diag
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc      8846 Dec 17 06:28 runtime_log.err
[2025-12-17 06:28:04] -rw-r--r--. 1 boinc boinc     22038 Dec 17 06:28 stderr.txt
[2025-12-17 06:28:04] HITS file was successfully produced:
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc 143518038 Dec 17 06:27 shared/HITS.pool.root.1
[2025-12-17 06:28:04]  *** Contents of shared directory: ***
[2025-12-17 06:28:04] total 327016
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc 189656088 Dec 17 05:04 ATLAS.root_0
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc     15847 Dec 17 05:04 start_atlas.sh
[2025-12-17 06:28:04] -rw-r--r--. 2 boinc boinc    592390 Dec 17 05:04 input.tar.gz
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc 143518038 Dec 17 06:27 HITS.pool.root.1
[2025-12-17 06:28:04] -rw-------. 1 boinc boinc   1075200 Dec 17 06:28 result.tar.gz
06:28:06 (456189): run_atlas exited; CPU time 37792.845287
06:28:06 (456189): called boinc_finish(0)

</stderr_txt>
]]>

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