Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:17:34 (7786): wrapper (7.7.26015): starting
18:17:34 (7786): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 18:17:34] Arguments: --nthreads 12
[2025-12-16 18:17:34] Threads: 12
[2025-12-16 18:17:34] Checking for CVMFS
[2025-12-16 18:17:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 18:17:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 18:17:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 18:17:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 18:17:34] 2.11.2.0 2984 317085 92044 154092 3 9 18240733 20275200 1 130560 1 141857293 99.974 17781460 14947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 18:17:34] CVMFS is ok
[2025-12-16 18:17:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 18:17:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 18:17:34] Further information can be found at the LHC@home message board.
[2025-12-16 18:17:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 18:17:34] Checking for apptainer binary...
[2025-12-16 18:17:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 18:17:34] Running /usr/bin/apptainer --version
[2025-12-16 18:17:34] apptainer version 1.3.2-1.el7
[2025-12-16 18:17:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 18:17:36] c-205-26.aglt2.org
[2025-12-16 18:17:36] apptainer works
[2025-12-16 18:17:36] Set ATHENA_PROC_NUMBER=12
[2025-12-16 18:17:36] Set ATHENA_CORE_NUMBER=12
[2025-12-16 18:17:36] Starting ATLAS job with PandaID=6931597958
[2025-12-16 18:17:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 19:35:04]  *** The last 200 lines of the pilot log: ***
[2025-12-16 19:35:04]  protocol_id=None
[2025-12-16 19:35:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-16 19:35:04]  replicas=None
[2025-12-16 19:35:04]  scope=mc23_13p6TeV
[2025-12-16 19:35:04]  status=None
[2025-12-16 19:35:04]  status_code=0
[2025-12-16 19:35:04]  storage_token=
[2025-12-16 19:35:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6931597958/log.47886831._014505.job.log.tgz.1
[2025-12-16 19:35:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/76/log.47886831._014505.job.log.tgz.1
[2025-12-16 19:35:04]  workdir=None
[2025-12-16 19:35:04] ]
[2025-12-16 19:35:04] 2025-12-17 00:34:30,832 | INFO     | transferring file log.47886831._014505.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6931597958/log.47886831._014505.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-16 19:35:04] 2025-12-17 00:34:30,832 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6931597958/log.47886831._014505.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._014505.job
[2025-12-16 19:35:04] 2025-12-17 00:34:30,854 | INFO     | adding to output.list: log.47886831._014505.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/76/log.47886831._014505.job.log.tg
[2025-12-16 19:35:04] 2025-12-17 00:34:30,855 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-16 19:35:04] 2025-12-17 00:34:30,855 | INFO     | summary of transferred files:
[2025-12-16 19:35:04] 2025-12-17 00:34:30,855 | INFO     |  -- lfn=log.47886831._014505.job.log.tgz.1, status_code=0, status=transferred
[2025-12-16 19:35:04] 2025-12-17 00:34:30,856 | INFO     | stage-out finished correctly
[2025-12-16 19:35:04] 2025-12-17 00:34:31,955 | INFO     | time since job start (4600s) is within the limit (174528.0s)
[2025-12-16 19:35:04] 2025-12-17 00:34:32,618 | INFO     | monitor loop #343: job 0:6931597958 is in state 'finished'
[2025-12-16 19:35:04] 2025-12-17 00:34:32,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 19:35:04] 2025-12-17 00:34:33,613 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-16 19:35:04] 2025-12-17 00:34:33,960 | INFO     | time since job start (4602s) is within the limit (174528.0s)
[2025-12-16 19:35:04] 2025-12-17 00:34:34,078 | INFO     | job 6931597958 has state=finished
[2025-12-16 19:35:04] 2025-12-17 00:34:34,078 | INFO     | preparing for final server update for job 6931597958 in state='finished'
[2025-12-16 19:35:04] 2025-12-17 00:34:34,078 | INFO     | this job has now completed (state=finished)
[2025-12-16 19:35:04] 2025-12-17 00:34:34,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-16 19:35:04] 2025-12-17 00:34:34,079 | INFO     | log transfer has been attempted: DONE
[2025-12-16 19:35:04] 2025-12-17 00:34:34,079 | INFO     | job 6931597958 has finished - writing final server update
[2025-12-16 19:35:04] 2025-12-17 00:34:34,079 | INFO     | total number of processed events: 400 (read)
[2025-12-16 19:35:04] 2025-12-17 00:34:34,080 | INFO     | executing command: lscpu
[2025-12-16 19:35:04] 2025-12-17 00:34:34,107 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 19:35:04] 2025-12-17 00:34:35,127 | INFO     | monitor loop #344: job 0:6931597958 is in state 'finished'
[2025-12-16 19:35:04] 2025-12-17 00:34:35,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 19:35:04] 2025-12-17 00:34:35,966 | INFO     | time since job start (4604s) is within the limit (174528.0s)
[2025-12-16 19:35:04] 2025-12-17 00:34:37,630 | INFO     | monitor loop #345: job 0:6931597958 is in state 'finished'
[2025-12-16 19:35:04] 2025-12-17 00:34:37,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 19:35:04] 2025-12-17 00:34:37,971 | INFO     | time since job start (4606s) is within the limit (174528.0s)
[2025-12-16 19:35:04] 2025-12-17 00:34:39,958 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 19:35:04] 2025-12-17 00:34:39,962 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-16 19:35:04] 2025-12-17 00:34:39,965 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6931597958/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 19:35:04] 2025-12-17 00:34:39,965 | INFO     | extracted standard info from prmon json
[2025-12-16 19:35:04] 2025-12-17 00:34:39,966 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 19:35:04] 2025-12-17 00:34:39,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 19:35:04] 2025-12-17 00:34:39,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 19:35:04] 2025-12-17 00:34:39,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 19:35:04] 2025-12-17 00:34:39,968 | INFO     | fitting pss+swap vs Time
[2025-12-16 19:35:04] 2025-12-17 00:34:39,968 | INFO     | sum of square deviations: 97479037.0
[2025-12-16 19:35:04] 2025-12-17 00:34:39,968 | INFO     | sum of deviations: -5910336116.000001
[2025-12-16 19:35:04] 2025-12-17 00:34:39,968 | INFO     | mean x: 1765929448.5
[2025-12-16 19:35:04] 2025-12-17 00:34:39,968 | INFO     | mean y: 2880626.1764705884
[2025-12-16 19:35:04] 2025-12-17 00:34:39,969 | INFO     | intersect: 107074482059.59557
[2025-12-16 19:35:04] 2025-12-17 00:34:39,969 | INFO     | chi2: 0.06738639403178512
[2025-12-16 19:35:04] 2025-12-17 00:34:39,969 | INFO     | current memory leak: -60.63 B/s (using 68 data points, chi2=0.07)
[2025-12-16 19:35:04] 2025-12-17 00:34:39,969 | INFO     | could have reported an average CPU frequency of 2039 MHz (6 samples)
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | ..............................
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . Timing measurements:
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . get job = 0 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . initial setup = 2 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . payload setup = 7 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . stage-in = 0 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . payload execution = 4571 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . stage-out = 0 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,970 | INFO     | . log creation = 0 s
[2025-12-16 19:35:04] 2025-12-17 00:34:39,971 | INFO     | ..............................
[2025-12-16 19:35:04] 2025-12-17 00:34:39,981 | INFO     | time since job start (4608s) is within the limit (174528.0s)
[2025-12-16 19:35:04] 2025-12-17 00:34:40,064 | INFO     | 
[2025-12-16 19:35:04] 2025-12-17 00:34:40,065 | INFO     | job summary report
[2025-12-16 19:35:04] 2025-12-17 00:34:40,065 | INFO     | --------------------------------------------------
[2025-12-16 19:35:04] 2025-12-17 00:34:40,065 | INFO     | PanDA job id: 6931597958
[2025-12-16 19:35:04] 2025-12-17 00:34:40,065 | INFO     | task id: 47886831
[2025-12-16 19:35:04] 2025-12-17 00:34:40,065 | INFO     | errors: (none)
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | pilot state: finished 
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | transexitcode: 0
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | exeerrorcode: 0
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | exeerrordiag: 
[2025-12-16 19:35:04] 2025-12-17 00:34:40,066 | INFO     | exitcode: 0
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | exitmsg: OK
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | cpuconsumptiontime: 50313 s
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | nevents: 400
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | neventsw: 0
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | pid: 17895
[2025-12-16 19:35:04] 2025-12-17 00:34:40,067 | INFO     | pgrp: 17895
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | corecount: 12
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | event service: False
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | sizes: {0: 2283993, 5: 2284255, 11: 2284311, 4582: 2310436, 4583: 2319434, 4586: 2319490, 4592: 2319812}
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | --------------------------------------------------
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | 
[2025-12-16 19:35:04] 2025-12-17 00:34:40,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 19:35:04] 2025-12-17 00:34:40,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 19:35:04] 2025-12-17 00:34:40,096 | INFO     | job 6931597958 has completed (purged errors)
[2025-12-16 19:35:04] 2025-12-17 00:34:40,097 | INFO     | overall cleanup function is called
[2025-12-16 19:35:04] 2025-12-17 00:34:41,105 | INFO     | --- collectZombieJob: --- 10, [17895]
[2025-12-16 19:35:04] 2025-12-17 00:34:41,105 | INFO     | zombie collector waiting for pid 17895
[2025-12-16 19:35:04] 2025-12-17 00:34:41,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 19:35:04] 2025-12-17 00:34:41,105 | INFO     | collected zombie processes
[2025-12-16 19:35:04] 2025-12-17 00:34:41,105 | INFO     | will attempt to kill all subprocesses of pid=17895
[2025-12-16 19:35:04] 2025-12-17 00:34:41,196 | INFO     | process IDs to be killed: [17895] (in reverse order)
[2025-12-16 19:35:04] 2025-12-17 00:34:41,246 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 19:35:04] 2025-12-17 00:34:41,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 19:35:04] 2025-12-17 00:34:41,250 | INFO     | did not find any defunct processes belonging to 17895
[2025-12-16 19:35:04] 2025-12-17 00:34:41,254 | INFO     | did not find any defunct processes belonging to 17895
[2025-12-16 19:35:04] 2025-12-17 00:34:41,254 | INFO     | ready for new job
[2025-12-16 19:35:04] 2025-12-17 00:34:41,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 19:35:04] 2025-12-17 00:34:41,256 | INFO     | ***************************************
[2025-12-16 19:35:04] 2025-12-17 00:34:41,256 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 19:35:04] 2025-12-17 00:34:41,256 | INFO     | ***************************************
[2025-12-16 19:35:04] 2025-12-17 00:34:41,256 | INFO     | 
[2025-12-16 19:35:04] 2025-12-17 00:34:41,256 | INFO     | architecture information:
[2025-12-16 19:35:04] 2025-12-17 00:34:41,257 | INFO     | executing command: cat /etc/os-release
[2025-12-16 19:35:04] 2025-12-17 00:34:41,271 | INFO     | cat /etc/os-release:
[2025-12-16 19:35:04] NAME="CentOS Linux"
[2025-12-16 19:35:04] VERSION="7 (Core)"
[2025-12-16 19:35:04] ID="centos"
[2025-12-16 19:35:04] ID_LIKE="rhel fedora"
[2025-12-16 19:35:04] VERSION_ID="7"
[2025-12-16 19:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 19:35:04] ANSI_COLOR="0;31"
[2025-12-16 19:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 19:35:04] HOME_URL="https://www.centos.org/"
[2025-12-16 19:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 19:35:04] 
[2025-12-16 19:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 19:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 19:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 19:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 19:35:04] 
[2025-12-16 19:35:04] 2025-12-17 00:34:41,271 | INFO     | ***************************************
[2025-12-16 19:35:04] 2025-12-17 00:34:41,774 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 19:35:04] 2025-12-17 00:34:41,791 | INFO     | sufficient remaining disk space (29450305536 B)
[2025-12-16 19:35:04] 2025-12-17 00:34:41,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 19:35:04] 2025-12-17 00:34:41,792 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 19:35:04] 2025-12-17 00:34:41,792 | INFO     | update_server=False
[2025-12-16 19:35:04] 2025-12-17 00:34:41,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 19:35:04] 2025-12-17 00:34:41,792 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-16 19:35:04] 2025-12-17 00:34:41,793 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 19:35:04] 2025-12-17 00:34:41,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:35:04] 2025-12-17 00:34:41,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 19:35:04] 2025-12-17 00:34:41,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 19:35:04] 2025-12-17 00:34:41,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 19:35:04] 2025-12-17 00:34:41,794 | INFO     | aborting loop
[2025-12-16 19:35:04] 2025-12-17 00:34:41,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 19:35:04] 2025-12-17 00:34:41,923 | INFO     | all job control threads have been joined
[2025-12-16 19:35:04] 2025-12-17 00:34:42,634 | INFO     | all payload control threads have been joined
[2025-12-16 19:35:04] 2025-12-17 00:34:42,798 | INFO     | [job] retrieve thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:42,799 | INFO     | [job] queue monitor thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:42,800 | INFO     | [job] job monitor thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:42,825 | INFO     | all data control threads have been joined
[2025-12-16 19:35:04] 2025-12-17 00:34:42,929 | INFO     | [job] control thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:42,994 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,121 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,387 | INFO     | [payload] failed_post thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,574 | INFO     | [data] copytool_in thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,639 | INFO     | [payload] control thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,800 | INFO     | [data] copytool_out thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,830 | INFO     | [data] control thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,966 | INFO     | [payload] validate_post thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,973 | INFO     | [job] validate thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:43,992 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:44,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 19:35:04] 2025-12-17 00:34:48,205 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 19:35:04] 2025-12-17 00:34:58,005 | INFO     | [monitor] cgroup control has ended
[2025-12-16 19:35:04] 2025-12-17 00:34:59,155 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152923690816)>', '<ExcThread(monitor, started 140152475207424)>']
[2025-12-16 19:35:04] 2025-12-17 00:34:59,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 19:35:04] 2025-12-17 00:34:59,884 | INFO     | [monitor] control thread has ended
[2025-12-16 19:35:04] 2025-12-17 00:35:04,166 | INFO     | all workflow threads have been joined
[2025-12-16 19:35:04] 2025-12-17 00:35:04,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 19:35:04] 2025-12-17 00:35:04,173 | INFO     | traces error code: 0
[2025-12-16 19:35:04] 2025-12-17 00:35:04,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 19:35:04] 2025-12-17 00:35:04,263 [wrapper] ==== pilot stdout END ====
[2025-12-16 19:35:04] 2025-12-17 00:35:04,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 19:35:04] 2025-12-17 00:35:04,271 [wrapper] pilotpid: 11475
[2025-12-16 19:35:04] 2025-12-17 00:35:04,274 [wrapper] Pilot exit status: 0
[2025-12-16 19:35:04] 2025-12-17 00:35:04,289 [wrapper] pandaids: 6931597958
[2025-12-16 19:35:04] 2025-12-17 00:35:04,330 [wrapper] cleanup supervisor_pilot 13526 11476
[2025-12-16 19:35:04] 2025-12-17 00:35:04,334 [wrapper] Test setup, not cleaning
[2025-12-16 19:35:04] 2025-12-17 00:35:04,338 [wrapper] apfmon messages muted
[2025-12-16 19:35:04] 2025-12-17 00:35:04,342 [wrapper] ==== wrapper stdout END ====
[2025-12-16 19:35:04] 2025-12-17 00:35:04,346 [wrapper] ==== wrapper stderr END ====
[2025-12-16 19:35:04]  *** Error codes and diagnostics ***
[2025-12-16 19:35:04]     "exeErrorCode": 0,
[2025-12-16 19:35:04]     "exeErrorDiag": "",
[2025-12-16 19:35:04]     "pilotErrorCode": 0,
[2025-12-16 19:35:04]     "pilotErrorDiag": "",
[2025-12-16 19:35:04]  *** Listing of results directory ***
[2025-12-16 19:35:04] total 342520
[2025-12-16 19:35:04] -rwx------ 1 boincer umatlas     36322 Dec 16 12:39 runpilot2-wrapper.sh
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 12:40 queuedata.json
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 12:41 pilot3.tar.gz
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas       100 Dec 16 18:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 19:35:04] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 18:17 run_atlas
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas       105 Dec 16 18:17 job.xml
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas 191509104 Dec 16 18:17 EVNT.47886829._000571.pool.root.1
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas    592416 Dec 16 18:17 input.tar.gz
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 18:17 start_atlas.sh
[2025-12-16 19:35:04] drwxrwx--x 2 boincer umatlas      4096 Dec 16 18:17 shared
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas         0 Dec 16 18:17 boinc_lockfile
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas      2539 Dec 16 18:17 pandaJob.out
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas        57 Dec 16 18:17 setup.sh.local
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas    987401 Dec 16 18:17 agis_schedconf.cvmfs.json
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas   1516240 Dec 16 18:17 agis_ddmendpoints.agis.ALL.json
[2025-12-16 19:35:04] drwx------ 5 boincer umatlas      4096 Dec 16 18:17 pilot3
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas      5953 Dec 16 19:31 init_data.xml
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas        95 Dec 16 19:33 pilot_heartbeat.json
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas 153206739 Dec 16 19:34 HITS.47886831._014505.pool.root.1
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas       529 Dec 16 19:34 boinc_task_state.xml
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas      1046 Dec 16 19:34 memory_monitor_summary.json
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas    387778 Dec 16 19:34 log.47886831._014505.job.log.tgz.1
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas      7849 Dec 16 19:34 heartbeat.json
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas        27 Dec 16 19:34 wrapper_checkpoint.txt
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 19:34 boinc_mmap_file
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas      4552 Dec 16 19:35 pilotlog.txt
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas    667174 Dec 16 19:35 log.47886831._014505.job.log.1
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas       357 Dec 16 19:35 output.list
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas       620 Dec 16 19:35 runtime_log
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas   1075200 Dec 16 19:35 result.tar.gz
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas       659 Dec 16 19:35 sm1NDmvBop8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLWaKDmIunkem.diag
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas      9344 Dec 16 19:35 runtime_log.err
[2025-12-16 19:35:04] -rw-r--r-- 1 boincer umatlas     21774 Dec 16 19:35 stderr.txt
[2025-12-16 19:35:04] HITS file was successfully produced:
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas 153206739 Dec 16 19:34 shared/HITS.pool.root.1
[2025-12-16 19:35:04]  *** Contents of shared directory: ***
[2025-12-16 19:35:04] total 338292
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas 191509104 Dec 16 18:17 ATLAS.root_0
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas    592416 Dec 16 18:17 input.tar.gz
[2025-12-16 19:35:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 18:17 start_atlas.sh
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas 153206739 Dec 16 19:34 HITS.pool.root.1
[2025-12-16 19:35:04] -rw------- 1 boincer umatlas   1075200 Dec 16 19:35 result.tar.gz
19:35:06 (7786): run_atlas exited; CPU time 50297.089536
19:35:06 (7786): called boinc_finish(0)

</stderr_txt>
]]>

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