Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:07 (2155369): wrapper (7.7.26015): starting
20:03:07 (2155369): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 20:03:07] Arguments: --nthreads 8
[2025-12-16 20:03:07] Threads: 8
[2025-12-16 20:03:07] Checking for CVMFS
[2025-12-16 20:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 20:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 20:03:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 20:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 20:03:08] 2.13.3.0 11830 59470 400432 154093 1 646 30064068 32935937 26782 16776704 0 320029408 99.498 405603095 32470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 20:03:08] CVMFS is ok
[2025-12-16 20:03:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 20:03:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 20:03:09] Further information can be found at the LHC@home message board.
[2025-12-16 20:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 20:03:09] Checking for apptainer binary...
[2025-12-16 20:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 20:03:09] Running /usr/bin/apptainer --version
[2025-12-16 20:03:09] apptainer version 1.4.5-2.el9
[2025-12-16 20:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 20:03:09] c6-8-25-1.aglt2.org
[2025-12-16 20:03:09] apptainer works
[2025-12-16 20:03:10] Set ATHENA_PROC_NUMBER=8
[2025-12-16 20:03:10] Set ATHENA_CORE_NUMBER=8
[2025-12-16 20:03:10] Starting ATLAS job with PandaID=6931283434
[2025-12-16 20:03:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 00:45:52]  *** The last 200 lines of the pilot log: ***
[2025-12-17 00:45:52] 2025-12-17 05:45:07,923 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-17 00:45:52] 2025-12-17 05:45:07,969 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2528.3992395833325
[2025-12-17 00:45:52] 2025-12-17 05:45:08,234 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931283434/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,235 | INFO     | extracted standard info from prmon json
[2025-12-17 00:45:52] 2025-12-17 05:45:08,235 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 00:45:52] 2025-12-17 05:45:08,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 00:45:52] 2025-12-17 05:45:08,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 00:45:52] 2025-12-17 05:45:08,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 00:45:52] 2025-12-17 05:45:08,249 | INFO     | fitting pss+swap vs Time
[2025-12-17 00:45:52] 2025-12-17 05:45:08,250 | INFO     | sum of square deviations: 6449148198.181854
[2025-12-17 00:45:52] 2025-12-17 05:45:08,252 | INFO     | sum of deviations: 17958758900.74544
[2025-12-17 00:45:52] 2025-12-17 05:45:08,256 | INFO     | mean x: 1765941877.7454545
[2025-12-17 00:45:52] 2025-12-17 05:45:08,257 | INFO     | mean y: 2492957.7963636364
[2025-12-17 00:45:52] 2025-12-17 05:45:08,257 | INFO     | intersect: -4915074981.501597
[2025-12-17 00:45:52] 2025-12-17 05:45:08,257 | INFO     | chi2: 2.2323626389563445
[2025-12-17 00:45:52] 2025-12-17 05:45:08,258 | INFO     | sum of square deviations: 6103784648.874072
[2025-12-17 00:45:52] 2025-12-17 05:45:08,260 | INFO     | sum of deviations: 35076253059.44444
[2025-12-17 00:45:52] 2025-12-17 05:45:08,260 | INFO     | mean x: 1765941725.2518518
[2025-12-17 00:45:52] 2025-12-17 05:45:08,260 | INFO     | mean y: 2500401.111111111
[2025-12-17 00:45:52] 2025-12-17 05:45:08,264 | INFO     | intersect: -10145730967.862898
[2025-12-17 00:45:52] 2025-12-17 05:45:08,265 | INFO     | chi2: 1.496025779683034
[2025-12-17 00:45:52] 2025-12-17 05:45:08,265 | INFO     | current chi2=1.496025779683034 (change=32.98464355314405 %)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,265 | INFO     | sum of square deviations: 5770946535.562294
[2025-12-17 00:45:52] 2025-12-17 05:45:08,267 | INFO     | sum of deviations: 34354453537.143364
[2025-12-17 00:45:52] 2025-12-17 05:45:08,268 | INFO     | mean x: 1765941572.7509434
[2025-12-17 00:45:52] 2025-12-17 05:45:08,268 | INFO     | mean y: 2500070.426415094
[2025-12-17 00:45:52] 2025-12-17 05:45:08,268 | INFO     | intersect: -10510152808.35666
[2025-12-17 00:45:52] 2025-12-17 05:45:08,272 | INFO     | chi2: 1.4966026923801428
[2025-12-17 00:45:52] 2025-12-17 05:45:08,273 | INFO     | current chi2=1.4966026923801428 (change=-0.03856301842812634 %)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,273 | INFO     | right removable region: 264
[2025-12-17 00:45:52] 2025-12-17 05:45:08,273 | INFO     | sum of square deviations: 6103709679.36664
[2025-12-17 00:45:52] 2025-12-17 05:45:08,275 | INFO     | sum of deviations: -22070278653.555565
[2025-12-17 00:45:52] 2025-12-17 05:45:08,275 | INFO     | mean x: 1765942030.2555556
[2025-12-17 00:45:52] 2025-12-17 05:45:08,275 | INFO     | mean y: 2510473.703703704
[2025-12-17 00:45:52] 2025-12-17 05:45:08,275 | INFO     | intersect: 6387944044.621848
[2025-12-17 00:45:52] 2025-12-17 05:45:08,276 | INFO     | chi2: 0.8320311719620614
[2025-12-17 00:45:52] 2025-12-17 05:45:08,276 | INFO     | current chi2=0.8320311719620614 (change=62.72867331487658 %)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,281 | INFO     | sum of square deviations: 5770846128.022612
[2025-12-17 00:45:52] 2025-12-17 05:45:08,283 | INFO     | sum of deviations: -14869847829.826416
[2025-12-17 00:45:52] 2025-12-17 05:45:08,283 | INFO     | mean x: 1765942182.7622643
[2025-12-17 00:45:52] 2025-12-17 05:45:08,283 | INFO     | mean y: 2507146.1773584904
[2025-12-17 00:45:52] 2025-12-17 05:45:08,283 | INFO     | intersect: 4552843604.887299
[2025-12-17 00:45:52] 2025-12-17 05:45:08,284 | INFO     | chi2: 0.793895400235042
[2025-12-17 00:45:52] 2025-12-17 05:45:08,284 | INFO     | current chi2=0.793895400235042 (change=4.583454684406743 %)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,284 | INFO     | left removable region: 20
[2025-12-17 00:45:52] 2025-12-17 05:45:08,288 | INFO     | sum of square deviations: 4504799171.487717
[2025-12-17 00:45:52] 2025-12-17 05:45:08,290 | INFO     | sum of deviations: 4644361105.569674
[2025-12-17 00:45:52] 2025-12-17 05:45:08,290 | INFO     | mean x: 1765942152.2827868
[2025-12-17 00:45:52] 2025-12-17 05:45:08,290 | INFO     | mean y: 2513823.3975409837
[2025-12-17 00:45:52] 2025-12-17 05:45:08,291 | INFO     | intersect: -1818138493.060677
[2025-12-17 00:45:52] 2025-12-17 05:45:08,291 | INFO     | chi2: 0.001123165088531977
[2025-12-17 00:45:52] 2025-12-17 05:45:08,291 | INFO     | current memory leak: 1.03 B/s (using 244 data points, chi2=0.00)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,292 | INFO     | could have reported an average CPU frequency of 2577 MHz (13 samples)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,292 | INFO     | ..............................
[2025-12-17 00:45:52] 2025-12-17 05:45:08,292 | INFO     | . Timing measurements:
[2025-12-17 00:45:52] 2025-12-17 05:45:08,292 | INFO     | . get job = 0 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,296 | INFO     | . initial setup = 2 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,296 | INFO     | . payload setup = 26 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,296 | INFO     | . stage-in = 0 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,297 | INFO     | . payload execution = 16762 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,297 | INFO     | . stage-out = 6 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,297 | INFO     | . log creation = 0 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,297 | INFO     | ..............................
[2025-12-17 00:45:52] 2025-12-17 05:45:08,983 | INFO     | 
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | job summary report
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | --------------------------------------------------
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | PanDA job id: 6931283434
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | task id: 47905841
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | errors: (none)
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | pilot state: finished 
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | transexitcode: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | exeerrorcode: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | exeerrordiag: 
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | exitcode: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:08,984 | INFO     | exitmsg: OK
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | cpuconsumptiontime: 61250 s
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | nevents: 400
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | neventsw: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | pid: 2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | pgrp: 2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | corecount: 8
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | event service: False
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | sizes: {0: 2283869, 1: 2283869, 12: 2283897, 21: 2284187, 23: 2284215, 16793: 2315901, 16794: 2316028, 16801: 2325082, 16804: 2325138, 16836: 2325332}
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | --------------------------------------------------
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | 
[2025-12-17 00:45:52] 2025-12-17 05:45:08,985 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 00:45:52] 2025-12-17 05:45:09,053 | INFO     | job 6931283434 has completed (purged errors)
[2025-12-17 00:45:52] 2025-12-17 05:45:09,053 | INFO     | overall cleanup function is called
[2025-12-17 00:45:52] 2025-12-17 05:45:10,087 | INFO     | --- collectZombieJob: --- 10, [2170130]
[2025-12-17 00:45:52] 2025-12-17 05:45:10,087 | INFO     | zombie collector waiting for pid 2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:10,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 00:45:52] 2025-12-17 05:45:10,088 | INFO     | collected zombie processes
[2025-12-17 00:45:52] 2025-12-17 05:45:10,088 | INFO     | will attempt to kill all subprocesses of pid=2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:13,364 | INFO     | PID=2161686 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 00:45:52] 2025-12-17 05:45:13,364 | INFO     | .. there are 25 such processes running
[2025-12-17 00:45:52] 2025-12-17 05:45:14,495 | INFO     | process IDs to be killed: [2170130] (in reverse order)
[2025-12-17 00:45:52] 2025-12-17 05:45:14,770 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 00:45:52] 2025-12-17 05:45:14,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 00:45:52] 2025-12-17 05:45:14,809 | INFO     | did not find any defunct processes belonging to 2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:14,828 | INFO     | did not find any defunct processes belonging to 2170130
[2025-12-17 00:45:52] 2025-12-17 05:45:14,828 | INFO     | ready for new job
[2025-12-17 00:45:52] 2025-12-17 05:45:14,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 00:45:52] 2025-12-17 05:45:14,830 | INFO     | ***************************************
[2025-12-17 00:45:52] 2025-12-17 05:45:14,832 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 00:45:52] 2025-12-17 05:45:14,832 | INFO     | ***************************************
[2025-12-17 00:45:52] 2025-12-17 05:45:14,832 | INFO     | 
[2025-12-17 00:45:52] 2025-12-17 05:45:14,837 | INFO     | architecture information:
[2025-12-17 00:45:52] 2025-12-17 05:45:14,838 | INFO     | executing command: cat /etc/os-release
[2025-12-17 00:45:52] 2025-12-17 05:45:14,890 | INFO     | cat /etc/os-release:
[2025-12-17 00:45:52] NAME="CentOS Linux"
[2025-12-17 00:45:52] VERSION="7 (Core)"
[2025-12-17 00:45:52] ID="centos"
[2025-12-17 00:45:52] ID_LIKE="rhel fedora"
[2025-12-17 00:45:52] VERSION_ID="7"
[2025-12-17 00:45:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 00:45:52] ANSI_COLOR="0;31"
[2025-12-17 00:45:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 00:45:52] HOME_URL="https://www.centos.org/"
[2025-12-17 00:45:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 00:45:52] 
[2025-12-17 00:45:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 00:45:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 00:45:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 00:45:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 00:45:52] 
[2025-12-17 00:45:52] 2025-12-17 05:45:14,891 | INFO     | ***************************************
[2025-12-17 00:45:52] 2025-12-17 05:45:15,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-17 00:45:52] 2025-12-17 05:45:15,476 | INFO     | sufficient remaining disk space (73806118912 B)
[2025-12-17 00:45:52] 2025-12-17 05:45:15,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 00:45:52] 2025-12-17 05:45:15,477 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 00:45:52] 2025-12-17 05:45:15,477 | INFO     | update_server=False
[2025-12-17 00:45:52] 2025-12-17 05:45:15,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 00:45:52] 2025-12-17 05:45:15,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:45:52] 2025-12-17 05:45:15,477 | INFO     | aborting loop
[2025-12-17 00:45:52] 2025-12-17 05:45:15,571 | INFO     | all payload control threads have been joined
[2025-12-17 00:45:52] 2025-12-17 05:45:15,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 00:45:52] 2025-12-17 05:45:15,672 | INFO     | all job control threads have been joined
[2025-12-17 00:45:52] 2025-12-17 05:45:15,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 00:45:52] 2025-12-17 05:45:16,214 | INFO     | all data control threads have been joined
[2025-12-17 00:45:52] 2025-12-17 05:45:16,484 | INFO     | [job] retrieve thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:16,485 | INFO     | [job] job monitor thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:16,577 | INFO     | [payload] control thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:16,678 | INFO     | [job] control thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,155 | INFO     | [job] validate thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,159 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,220 | INFO     | [data] control thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,409 | INFO     | [data] copytool_in thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,475 | INFO     | [payload] validate_post thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,500 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,696 | INFO     | [data] copytool_out thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,697 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:17,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 00:45:52] 2025-12-17 05:45:18,087 | INFO     | [payload] failed_post thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:18,785 | INFO     | [job] queue monitor thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:19,672 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 00:45:52] 2025-12-17 05:45:21,219 | INFO     | [monitor] cgroup control has ended
[2025-12-17 00:45:52] 2025-12-17 05:45:23,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702567450432)>', '<ExcThread(monitor, started 140701853546240)>']
[2025-12-17 00:45:52] 2025-12-17 05:45:28,345 | INFO     | all workflow threads have been joined
[2025-12-17 00:45:52] 2025-12-17 05:45:28,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 00:45:52] 2025-12-17 05:45:28,346 | INFO     | traces error code: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:28,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 00:45:52] 2025-12-17 05:45:50,449 | INFO     | PID=2161686 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 00:45:52] 2025-12-17 05:45:50,450 | INFO     | .. there are 26 such processes running
[2025-12-17 00:45:52] 2025-12-17 05:45:50,451 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 00:45:52] 2025-12-17 05:45:50,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 00:45:52] 2025-12-17 05:45:50,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 00:45:52] 2025-12-17 05:45:50,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 00:45:52] 2025-12-17 05:45:50,451 | INFO     | [monitor] control thread has ended
[2025-12-17 00:45:52] 2025-12-17 05:45:51,766 [wrapper] ==== pilot stdout END ====
[2025-12-17 00:45:52] 2025-12-17 05:45:51,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 00:45:52] 2025-12-17 05:45:51,805 [wrapper] pilotpid: 2161686
[2025-12-17 00:45:52] 2025-12-17 05:45:51,832 [wrapper] Pilot exit status: 0
[2025-12-17 00:45:52] 2025-12-17 05:45:51,941 [wrapper] pandaids: 6931283434
[2025-12-17 00:45:52] 2025-12-17 05:45:52,209 [wrapper] cleanup supervisor_pilot 3050719 2161687
[2025-12-17 00:45:52] 2025-12-17 05:45:52,321 [wrapper] Test setup, not cleaning
[2025-12-17 00:45:52] 2025-12-17 05:45:52,335 [wrapper] apfmon messages muted
[2025-12-17 00:45:52] 2025-12-17 05:45:52,350 [wrapper] ==== wrapper stdout END ====
[2025-12-17 00:45:52] 2025-12-17 05:45:52,358 [wrapper] ==== wrapper stderr END ====
[2025-12-17 00:45:52]  *** Error codes and diagnostics ***
[2025-12-17 00:45:52]     "exeErrorCode": 0,
[2025-12-17 00:45:52]     "exeErrorDiag": "",
[2025-12-17 00:45:52]     "pilotErrorCode": 0,
[2025-12-17 00:45:52]     "pilotErrorDiag": "",
[2025-12-17 00:45:52]  *** Listing of results directory ***
[2025-12-17 00:45:52] total 404240
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 07:06 pilot3.tar.gz
[2025-12-17 00:45:52] -rwx------. 1 boincer umatlas     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 07:09 queuedata.json
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas       100 Dec 16 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 00:45:52] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 20:03 run_atlas
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas       105 Dec 16 20:03 job.xml
[2025-12-17 00:45:52] -rw-r--r--. 2 boincer umatlas 200018465 Dec 16 20:03 EVNT.47905839._000002.pool.root.1
[2025-12-17 00:45:52] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:03 start_atlas.sh
[2025-12-17 00:45:52] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 20:03 shared
[2025-12-17 00:45:52] -rw-r--r--. 2 boincer umatlas    592373 Dec 16 20:03 input.tar.gz
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas         0 Dec 16 20:03 boinc_lockfile
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas      2447 Dec 16 20:03 pandaJob.out
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas        57 Dec 16 20:03 setup.sh.local
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas    987401 Dec 16 20:03 agis_schedconf.cvmfs.json
[2025-12-17 00:45:52] drwx------. 5 boincer umatlas      4096 Dec 16 20:03 pilot3
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas      6877 Dec 17 00:39 init_data.xml
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas 204790609 Dec 17 00:42 HITS.47905841._000045.pool.root.1
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas       531 Dec 17 00:42 boinc_task_state.xml
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas      1044 Dec 17 00:44 memory_monitor_summary.json
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas   1516240 Dec 17 00:44 agis_ddmendpoints.agis.ALL.json
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas    495202 Dec 17 00:44 log.47905841._000045.job.log.tgz.1
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas      7815 Dec 17 00:45 heartbeat.json
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas      8192 Dec 17 00:45 boinc_mmap_file
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas        28 Dec 17 00:45 wrapper_checkpoint.txt
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas        95 Dec 17 00:45 pilot_heartbeat.json
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas       823 Dec 17 00:45 pilotlog.txt
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas   2114368 Dec 17 00:45 log.47905841._000045.job.log.1
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas       357 Dec 17 00:45 output.list
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas       620 Dec 17 00:45 runtime_log
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas   2631680 Dec 17 00:45 result.tar.gz
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas      9348 Dec 17 00:45 runtime_log.err
[2025-12-17 00:45:52] -rw-------. 1 boincer umatlas       657 Dec 17 00:45 8DVMDm11ip8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCZVKDmEfX1cn.diag
[2025-12-17 00:45:52] -rw-r--r--. 1 boincer umatlas     21295 Dec 17 00:45 stderr.txt
[2025-12-17 00:45:53] HITS file was successfully produced:
[2025-12-17 00:45:53] -rw-------. 1 boincer umatlas 204790609 Dec 17 00:42 shared/HITS.pool.root.1
[2025-12-17 00:45:53]  *** Contents of shared directory: ***
[2025-12-17 00:45:53] total 398496
[2025-12-17 00:45:53] -rw-r--r--. 2 boincer umatlas 200018465 Dec 16 20:03 ATLAS.root_0
[2025-12-17 00:45:53] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 20:03 start_atlas.sh
[2025-12-17 00:45:53] -rw-r--r--. 2 boincer umatlas    592373 Dec 16 20:03 input.tar.gz
[2025-12-17 00:45:53] -rw-------. 1 boincer umatlas 204790609 Dec 17 00:42 HITS.pool.root.1
[2025-12-17 00:45:53] -rw-------. 1 boincer umatlas   2631680 Dec 17 00:45 result.tar.gz
00:45:54 (2155369): run_atlas exited; CPU time 61957.061527
00:45:54 (2155369): called boinc_finish(0)

</stderr_txt>
]]>

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