Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:08 (732772): wrapper (7.7.26015): starting
19:03:08 (732772): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 19:03:08] Arguments: --nthreads 8
[2025-12-16 19:03:08] Threads: 8
[2025-12-16 19:03:08] Checking for CVMFS
[2025-12-16 19:03:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 19:03:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 19:03:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 19:03:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 19:03:11] 2.13.3.0 5308 37930 358544 154092 2 566 26795548 32935937 16442 16776704 0 104927814 99.339 205317582 40508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 19:03:11] CVMFS is ok
[2025-12-16 19:03:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 19:03:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 19:03:11] Further information can be found at the LHC@home message board.
[2025-12-16 19:03:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 19:03:11] Checking for apptainer binary...
[2025-12-16 19:03:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 19:03:11] Running /usr/bin/apptainer --version
[2025-12-16 19:03:11] apptainer version 1.4.5-2.el9
[2025-12-16 19:03:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 19:03:11] c6-1-24-1.aglt2.org
[2025-12-16 19:03:11] apptainer works
[2025-12-16 19:03:12] Set ATHENA_PROC_NUMBER=8
[2025-12-16 19:03:12] Set ATHENA_CORE_NUMBER=8
[2025-12-16 19:03:12] Starting ATLAS job with PandaID=6931484749
[2025-12-16 19:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 22:52:49]  *** The last 200 lines of the pilot log: ***
[2025-12-16 22:52:49] 2025-12-17 03:52:07,928 | INFO     | time since job start (13669s) is within the limit (174528.0s)
[2025-12-16 22:52:49] 2025-12-17 03:52:09,150 | INFO     | monitor loop #888: job 0:6931484749 is in state 'finished'
[2025-12-16 22:52:49] 2025-12-17 03:52:09,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:52:49] 2025-12-17 03:52:09,449 | INFO     | PID=744232 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 22:52:49] 2025-12-17 03:52:09,449 | INFO     | .. there are 17 such processes running
[2025-12-16 22:52:49] 2025-12-17 03:52:10,450 | INFO     | time since job start (13672s) is within the limit (174528.0s)
[2025-12-16 22:52:49] 2025-12-17 03:52:11,659 | INFO     | monitor loop #889: job 0:6931484749 is in state 'finished'
[2025-12-16 22:52:49] 2025-12-17 03:52:11,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,456 | INFO     | time since job start (13674s) is within the limit (174528.0s)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,638 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 22:52:49] 2025-12-17 03:52:12,641 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2998.6145000000006
[2025-12-16 22:52:49] 2025-12-17 03:52:12,748 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6931484749/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,748 | INFO     | extracted standard info from prmon json
[2025-12-16 22:52:49] 2025-12-17 03:52:12,748 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 22:52:49] 2025-12-17 03:52:12,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 22:52:49] 2025-12-17 03:52:12,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 22:52:49] 2025-12-17 03:52:12,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 22:52:49] 2025-12-17 03:52:12,821 | INFO     | fitting pss+swap vs Time
[2025-12-16 22:52:49] 2025-12-17 03:52:12,821 | INFO     | sum of square deviations: 3393130051.4594617
[2025-12-16 22:52:49] 2025-12-17 03:52:12,823 | INFO     | sum of deviations: 30526224618.459457
[2025-12-16 22:52:49] 2025-12-17 03:52:12,823 | INFO     | mean x: 1765936742.5135136
[2025-12-16 22:52:49] 2025-12-17 03:52:12,823 | INFO     | mean y: 2497617.5135135134
[2025-12-16 22:52:49] 2025-12-17 03:52:12,823 | INFO     | intersect: -15884715912.887815
[2025-12-16 22:52:49] 2025-12-17 03:52:12,824 | INFO     | chi2: 2.9645374360273893
[2025-12-16 22:52:49] 2025-12-17 03:52:12,824 | INFO     | sum of square deviations: 3169065303.8341103
[2025-12-16 22:52:49] 2025-12-17 03:52:12,825 | INFO     | sum of deviations: 43835182167.83409
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | mean x: 1765936590.0276499
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | mean y: 2506501.0276497696
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | intersect: -24424302257.70973
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | chi2: 2.283356685533866
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | current chi2=2.283356685533866 (change=22.977640363561587 %)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,826 | INFO     | right removable region: 216
[2025-12-16 22:52:49] 2025-12-17 03:52:12,827 | INFO     | sum of square deviations: 3168968558.774207
[2025-12-16 22:52:49] 2025-12-17 03:52:12,837 | INFO     | sum of deviations: -18289922301.483864
[2025-12-16 22:52:49] 2025-12-17 03:52:12,837 | INFO     | mean x: 1765936895.032258
[2025-12-16 22:52:49] 2025-12-17 03:52:12,837 | INFO     | mean y: 2530622.2119815666
[2025-12-16 22:52:49] 2025-12-17 03:52:12,837 | INFO     | intersect: 10194758156.320816
[2025-12-16 22:52:49] 2025-12-17 03:52:12,841 | INFO     | chi2: 0.804394718697224
[2025-12-16 22:52:49] 2025-12-17 03:52:12,841 | INFO     | current chi2=0.804394718697224 (change=72.86609678388315 %)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,842 | INFO     | sum of square deviations: 2954913150.5282946
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | sum of deviations: -20581561464.075474
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | mean x: 1765937047.54717
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | mean y: 2532223.4575471696
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | intersect: 12302637178.921963
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | chi2: 0.7873432533472664
[2025-12-16 22:52:49] 2025-12-17 03:52:12,843 | INFO     | current chi2=0.7873432533472664 (change=2.119788327001164 %)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,844 | INFO     | left removable region: 20
[2025-12-16 22:52:49] 2025-12-17 03:52:12,844 | INFO     | sum of square deviations: 2335134468.530622
[2025-12-16 22:52:49] 2025-12-17 03:52:12,857 | INFO     | sum of deviations: -12613059691.448984
[2025-12-16 22:52:49] 2025-12-17 03:52:12,857 | INFO     | mean x: 1765937169.6122448
[2025-12-16 22:52:49] 2025-12-17 03:52:12,857 | INFO     | mean y: 2547077.7704081633
[2025-12-16 22:52:49] 2025-12-17 03:52:12,857 | INFO     | intersect: 9541128787.663757
[2025-12-16 22:52:49] 2025-12-17 03:52:12,857 | INFO     | chi2: 0.019474597346617828
[2025-12-16 22:52:49] 2025-12-17 03:52:12,858 | INFO     | current memory leak: -5.40 B/s (using 196 data points, chi2=0.02)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,858 | INFO     | could have reported an average CPU frequency of 3004 MHz (11 samples)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,858 | INFO     | ..............................
[2025-12-16 22:52:49] 2025-12-17 03:52:12,858 | INFO     | . Timing measurements:
[2025-12-16 22:52:49] 2025-12-17 03:52:12,858 | INFO     | . get job = 0 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . initial setup = 4 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . payload setup = 44 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . stage-in = 0 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . payload execution = 13542 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . stage-out = 2 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | . log creation = 0 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,859 | INFO     | ..............................
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | 
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | job summary report
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | --------------------------------------------------
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | PanDA job id: 6931484749
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | task id: 47905857
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | errors: (none)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | pilot state: finished 
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | transexitcode: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | exeerrorcode: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | exeerrordiag: 
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | exitcode: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:12,944 | INFO     | exitmsg: OK
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | cpuconsumptiontime: 60212 s
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | nevents: 400
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | neventsw: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | pid: 752648
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | pgrp: 752648
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | corecount: 8
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | event service: False
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | sizes: {0: 2283682, 1: 2283738, 2: 2283766, 3: 2283993, 14: 2283993, 25: 2284021, 30: 2284439, 35: 2284467, 13591: 2314704, 13594: 2323758, 13609: 2323896}
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | --------------------------------------------------
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | 
[2025-12-16 22:52:49] 2025-12-17 03:52:12,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | job 6931484749 has completed (purged errors)
[2025-12-16 22:52:49] 2025-12-17 03:52:12,968 | INFO     | overall cleanup function is called
[2025-12-16 22:52:49] 2025-12-17 03:52:13,983 | INFO     | --- collectZombieJob: --- 10, [752648]
[2025-12-16 22:52:49] 2025-12-17 03:52:13,983 | INFO     | zombie collector waiting for pid 752648
[2025-12-16 22:52:49] 2025-12-17 03:52:13,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 22:52:49] 2025-12-17 03:52:13,983 | INFO     | collected zombie processes
[2025-12-16 22:52:49] 2025-12-17 03:52:13,983 | INFO     | will attempt to kill all subprocesses of pid=752648
[2025-12-16 22:52:49] 2025-12-17 03:52:14,418 | INFO     | process IDs to be killed: [752648] (in reverse order)
[2025-12-16 22:52:49] 2025-12-17 03:52:14,596 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 22:52:49] 2025-12-17 03:52:14,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 22:52:49] 2025-12-17 03:52:14,616 | INFO     | did not find any defunct processes belonging to 752648
[2025-12-16 22:52:49] 2025-12-17 03:52:14,629 | INFO     | did not find any defunct processes belonging to 752648
[2025-12-16 22:52:49] 2025-12-17 03:52:14,630 | INFO     | ready for new job
[2025-12-16 22:52:49] 2025-12-17 03:52:14,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 22:52:49] 2025-12-17 03:52:14,632 | INFO     | ***************************************
[2025-12-16 22:52:49] 2025-12-17 03:52:14,632 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 22:52:49] 2025-12-17 03:52:14,632 | INFO     | ***************************************
[2025-12-16 22:52:49] 2025-12-17 03:52:14,632 | INFO     | 
[2025-12-16 22:52:49] 2025-12-17 03:52:14,635 | INFO     | architecture information:
[2025-12-16 22:52:49] 2025-12-17 03:52:14,636 | INFO     | executing command: cat /etc/os-release
[2025-12-16 22:52:49] 2025-12-17 03:52:14,719 | INFO     | cat /etc/os-release:
[2025-12-16 22:52:49] NAME="CentOS Linux"
[2025-12-16 22:52:49] VERSION="7 (Core)"
[2025-12-16 22:52:49] ID="centos"
[2025-12-16 22:52:49] ID_LIKE="rhel fedora"
[2025-12-16 22:52:49] VERSION_ID="7"
[2025-12-16 22:52:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 22:52:49] ANSI_COLOR="0;31"
[2025-12-16 22:52:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 22:52:49] HOME_URL="https://www.centos.org/"
[2025-12-16 22:52:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 22:52:49] 
[2025-12-16 22:52:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 22:52:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 22:52:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 22:52:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 22:52:49] 
[2025-12-16 22:52:49] 2025-12-17 03:52:14,720 | INFO     | ***************************************
[2025-12-16 22:52:49] 2025-12-17 03:52:15,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-16 22:52:49] 2025-12-17 03:52:15,286 | INFO     | sufficient remaining disk space (75264688128 B)
[2025-12-16 22:52:49] 2025-12-17 03:52:15,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 22:52:49] 2025-12-17 03:52:15,286 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 22:52:49] 2025-12-17 03:52:15,286 | INFO     | update_server=False
[2025-12-16 22:52:49] 2025-12-17 03:52:15,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 22:52:49] 2025-12-17 03:52:15,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:52:49] 2025-12-17 03:52:15,292 | INFO     | aborting loop
[2025-12-16 22:52:49] 2025-12-17 03:52:15,469 | INFO     | all data control threads have been joined
[2025-12-16 22:52:49] 2025-12-17 03:52:15,872 | INFO     | all payload control threads have been joined
[2025-12-16 22:52:49] 2025-12-17 03:52:16,292 | INFO     | [job] retrieve thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,296 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,298 | INFO     | [job] job monitor thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,319 | INFO     | all job control threads have been joined
[2025-12-16 22:52:49] 2025-12-17 03:52:16,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 22:52:49] 2025-12-17 03:52:16,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,434 | INFO     | [payload] failed_post thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,442 | INFO     | [data] copytool_in thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,475 | INFO     | [data] control thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,606 | INFO     | [job] validate thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,878 | INFO     | [payload] control thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:16,926 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:17,240 | INFO     | [payload] validate_post thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:17,325 | INFO     | [job] control thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:17,696 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:17,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 22:52:49] 2025-12-17 03:52:17,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 22:52:49] 2025-12-17 03:52:18,377 | INFO     | [data] copytool_out thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:18,967 | INFO     | [job] queue monitor thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:22,009 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 22:52:49] 2025-12-17 03:52:41,775 | INFO     | [monitor] cgroup control has ended
[2025-12-16 22:52:49] 2025-12-17 03:52:43,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373974271808)>', '<ExcThread(monitor, started 140373338871552)>']
[2025-12-16 22:52:49] 2025-12-17 03:52:46,044 | INFO     | PID=744232 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 22:52:49] 2025-12-17 03:52:46,044 | INFO     | .. there are 17 such processes running
[2025-12-16 22:52:49] 2025-12-17 03:52:46,045 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 22:52:49] 2025-12-17 03:52:46,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 22:52:49] 2025-12-17 03:52:46,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 22:52:49] 2025-12-17 03:52:46,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 22:52:49] 2025-12-17 03:52:46,045 | INFO     | [monitor] control thread has ended
[2025-12-16 22:52:49] 2025-12-17 03:52:48,428 | INFO     | all workflow threads have been joined
[2025-12-16 22:52:49] 2025-12-17 03:52:48,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 22:52:49] 2025-12-17 03:52:48,430 | INFO     | traces error code: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:48,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 22:52:49] 2025-12-17 03:52:49,106 [wrapper] ==== pilot stdout END ====
[2025-12-16 22:52:49] 2025-12-17 03:52:49,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 22:52:49] 2025-12-17 03:52:49,125 [wrapper] pilotpid: 744232
[2025-12-16 22:52:49] 2025-12-17 03:52:49,141 [wrapper] Pilot exit status: 0
[2025-12-16 22:52:49] 2025-12-17 03:52:49,220 [wrapper] pandaids: 6931484749
[2025-12-16 22:52:49] 2025-12-17 03:52:49,418 [wrapper] cleanup supervisor_pilot 1404090 744233
[2025-12-16 22:52:49] 2025-12-17 03:52:49,445 [wrapper] Test setup, not cleaning
[2025-12-16 22:52:49] 2025-12-17 03:52:49,467 [wrapper] apfmon messages muted
[2025-12-16 22:52:49] 2025-12-17 03:52:49,470 [wrapper] ==== wrapper stdout END ====
[2025-12-16 22:52:49] 2025-12-17 03:52:49,472 [wrapper] ==== wrapper stderr END ====
[2025-12-16 22:52:49]  *** Error codes and diagnostics ***
[2025-12-16 22:52:49]     "exeErrorCode": 0,
[2025-12-16 22:52:49]     "exeErrorDiag": "",
[2025-12-16 22:52:49]     "pilotErrorCode": 0,
[2025-12-16 22:52:49]     "pilotErrorDiag": "",
[2025-12-16 22:52:49]  *** Listing of results directory ***
[2025-12-16 22:52:49] total 412332
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:35 pilot3.tar.gz
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:36 queuedata.json
[2025-12-16 22:52:49] -rwx------. 1 boincer umatlas     36322 Dec 16 12:37 runpilot2-wrapper.sh
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas       100 Dec 16 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 22:52:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 19:03 run_atlas
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas       105 Dec 16 19:03 job.xml
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas 202785354 Dec 16 19:03 EVNT.47905855._000014.pool.root.1
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 19:03 start_atlas.sh
[2025-12-16 22:52:49] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 19:03 shared
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas    592372 Dec 16 19:03 input.tar.gz
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas         0 Dec 16 19:03 boinc_lockfile
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas      2476 Dec 16 19:03 pandaJob.out
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas        57 Dec 16 19:03 setup.sh.local
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas    987401 Dec 16 19:04 agis_schedconf.cvmfs.json
[2025-12-16 22:52:49] drwx------. 5 boincer umatlas      4096 Dec 16 19:04 pilot3
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas      6843 Dec 16 22:46 init_data.xml
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas 211072884 Dec 16 22:51 HITS.47905857._000336.pool.root.1
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas       529 Dec 16 22:51 boinc_task_state.xml
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas      1043 Dec 16 22:51 memory_monitor_summary.json
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas   1516240 Dec 16 22:51 agis_ddmendpoints.agis.ALL.json
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas    447518 Dec 16 22:51 log.47905857._000336.job.log.tgz.1
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas      7819 Dec 16 22:52 heartbeat.json
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 22:52 boinc_mmap_file
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas        27 Dec 16 22:52 wrapper_checkpoint.txt
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas        95 Dec 16 22:52 pilot_heartbeat.json
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas      4823 Dec 16 22:52 pilotlog.txt
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas   1779998 Dec 16 22:52 log.47905857._000336.job.log.1
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas       357 Dec 16 22:52 output.list
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas       620 Dec 16 22:52 runtime_log
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas   2242560 Dec 16 22:52 result.tar.gz
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 22:52 runtime_log.err
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas       658 Dec 16 22:52 JjnMDmEAop8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0yVKDmXER93n.diag
[2025-12-16 22:52:49] -rw-r--r--. 1 boincer umatlas     21506 Dec 16 22:52 stderr.txt
[2025-12-16 22:52:49] HITS file was successfully produced:
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas 211072884 Dec 16 22:51 shared/HITS.pool.root.1
[2025-12-16 22:52:49]  *** Contents of shared directory: ***
[2025-12-16 22:52:49] total 406956
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas 202785354 Dec 16 19:03 ATLAS.root_0
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 19:03 start_atlas.sh
[2025-12-16 22:52:49] -rw-r--r--. 2 boincer umatlas    592372 Dec 16 19:03 input.tar.gz
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas 211072884 Dec 16 22:51 HITS.pool.root.1
[2025-12-16 22:52:49] -rw-------. 1 boincer umatlas   2242560 Dec 16 22:52 result.tar.gz
22:52:50 (732772): run_atlas exited; CPU time 60582.336076
22:52:50 (732772): called boinc_finish(0)

</stderr_txt>
]]>

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