Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:08 (7682): wrapper (7.7.26015): starting
03:38:08 (7682): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 03:38:08] Arguments: --nthreads 8
[2025-12-17 03:38:08] Threads: 8
[2025-12-17 03:38:08] Checking for CVMFS
[2025-12-17 03:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 03:38:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 03:38:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 03:38:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 03:38:11] 2.11.2.0 2518 1704 64028 154095 0 61 24848736 25165824 4712 130560 0 1089645 99.901 308005 1494 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 03:38:11] CVMFS is ok
[2025-12-17 03:38:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 03:38:11] Checking for apptainer binary...
[2025-12-17 03:38:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 03:38:11] Running /usr/bin/apptainer --version
[2025-12-17 03:38:11] apptainer version 1.3.2-1.el7
[2025-12-17 03:38:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 03:38:15] cg-vwn419.simple-grid.lan
[2025-12-17 03:38:15] apptainer works
[2025-12-17 03:38:15] Set ATHENA_PROC_NUMBER=8
[2025-12-17 03:38:15] Set ATHENA_CORE_NUMBER=8
[2025-12-17 03:38:15] Starting ATLAS job with PandaID=6931598084
[2025-12-17 03:38:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 08:23:15]  *** The last 200 lines of the pilot log: ***
[2025-12-17 08:23:16] 2025-12-17 07:22:18,039 | INFO     | time since job start (16840s) is within the limit (174528.0s)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,546 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 08:23:16] 2025-12-17 07:22:18,547 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-17 08:23:16] 2025-12-17 07:22:18,548 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6931598084/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,549 | INFO     | extracted standard info from prmon json
[2025-12-17 08:23:16] 2025-12-17 07:22:18,549 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 08:23:16] 2025-12-17 07:22:18,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 08:23:16] 2025-12-17 07:22:18,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 08:23:16] 2025-12-17 07:22:18,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 08:23:16] 2025-12-17 07:22:18,555 | INFO     | fitting pss+swap vs Time
[2025-12-17 08:23:16] 2025-12-17 07:22:18,556 | INFO     | sum of square deviations: 5968658887.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,559 | INFO     | sum of deviations: 88871430303.49997
[2025-12-17 08:23:16] 2025-12-17 07:22:18,559 | INFO     | mean x: 1765947898.5
[2025-12-17 08:23:16] 2025-12-17 07:22:18,559 | INFO     | mean y: 2427385.5335820895
[2025-12-17 08:23:16] 2025-12-17 07:22:18,559 | INFO     | intersect: -26291974514.863544
[2025-12-17 08:23:16] 2025-12-17 07:22:18,560 | INFO     | chi2: 5.891734202327423
[2025-12-17 08:23:16] 2025-12-17 07:22:18,560 | INFO     | sum of square deviations: 5640782972.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,563 | INFO     | sum of deviations: 104713500969.99998
[2025-12-17 08:23:16] 2025-12-17 07:22:18,563 | INFO     | mean x: 1765947746.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,563 | INFO     | mean y: 2434630.049429658
[2025-12-17 08:23:16] 2025-12-17 07:22:18,563 | INFO     | intersect: -32779995031.160427
[2025-12-17 08:23:16] 2025-12-17 07:22:18,563 | INFO     | chi2: 5.158922290199219
[2025-12-17 08:23:16] 2025-12-17 07:22:18,564 | INFO     | current chi2=5.158922290199219 (change=12.437966258537594 %)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,564 | INFO     | right removable region: 262
[2025-12-17 08:23:16] 2025-12-17 07:22:18,564 | INFO     | sum of square deviations: 5640782972.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,566 | INFO     | sum of deviations: 303853322.0000076
[2025-12-17 08:23:16] 2025-12-17 07:22:18,567 | INFO     | mean x: 1765948051.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,567 | INFO     | mean y: 2468540.5171102663
[2025-12-17 08:23:16] 2025-12-17 07:22:18,567 | INFO     | intersect: -92658179.37963757
[2025-12-17 08:23:16] 2025-12-17 07:22:18,567 | INFO     | chi2: 1.5753057599645204
[2025-12-17 08:23:16] 2025-12-17 07:22:18,567 | INFO     | current chi2=1.5753057599645204 (change=73.26244352058134 %)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,568 | INFO     | sum of square deviations: 5325139844.5
[2025-12-17 08:23:16] 2025-12-17 07:22:18,570 | INFO     | sum of deviations: -28429838303.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,570 | INFO     | mean x: 1765948203.5
[2025-12-17 08:23:16] 2025-12-17 07:22:18,570 | INFO     | mean y: 2482311.093023256
[2025-12-17 08:23:16] 2025-12-17 07:22:18,571 | INFO     | intersect: 9430520511.598227
[2025-12-17 08:23:16] 2025-12-17 07:22:18,571 | INFO     | chi2: 0.8870577108689783
[2025-12-17 08:23:16] 2025-12-17 07:22:18,571 | INFO     | current chi2=0.8870577108689783 (change=43.68980718454575 %)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,572 | INFO     | sum of square deviations: 5021496942.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,574 | INFO     | sum of deviations: -22744593468.000008
[2025-12-17 08:23:16] 2025-12-17 07:22:18,574 | INFO     | mean x: 1765948356.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,574 | INFO     | mean y: 2479434.1343873516
[2025-12-17 08:23:16] 2025-12-17 07:22:18,574 | INFO     | intersect: 8001245122.261127
[2025-12-17 08:23:16] 2025-12-17 07:22:18,574 | INFO     | chi2: 0.8655099621428477
[2025-12-17 08:23:16] 2025-12-17 07:22:18,575 | INFO     | current chi2=0.8655099621428477 (change=2.4291259139185044 %)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,575 | INFO     | left removable region: 30
[2025-12-17 08:23:16] 2025-12-17 07:22:18,575 | INFO     | sum of square deviations: 3871990738.0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,577 | INFO     | sum of deviations: 5799094624.999999
[2025-12-17 08:23:16] 2025-12-17 07:22:18,577 | INFO     | mean x: 1765948630.5
[2025-12-17 08:23:16] 2025-12-17 07:22:18,577 | INFO     | mean y: 2481829.043103448
[2025-12-17 08:23:16] 2025-12-17 07:22:18,577 | INFO     | intersect: -2642385864.118889
[2025-12-17 08:23:16] 2025-12-17 07:22:18,578 | INFO     | chi2: 0.000683139253969478
[2025-12-17 08:23:16] 2025-12-17 07:22:18,578 | INFO     | current memory leak: 1.50 B/s (using 232 data points, chi2=0.00)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | ..............................
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . Timing measurements:
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . get job = 0 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . initial setup = 12 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . payload setup = 122 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . stage-in = 0 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . payload execution = 16433 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,579 | INFO     | . stage-out = 2 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,580 | INFO     | . log creation = 1 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,580 | INFO     | ..............................
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | 
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | job summary report
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | --------------------------------------------------
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | PanDA job id: 6931598084
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | task id: 47886831
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | errors: (none)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | pilot state: finished 
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | transexitcode: 0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | exeerrorcode: 0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | exeerrordiag: 
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | exitcode: 0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | exitmsg: OK
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | cpuconsumptiontime: 60544 s
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | nevents: 400
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | neventsw: 0
[2025-12-17 08:23:16] 2025-12-17 07:22:18,812 | INFO     | pid: 17975
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | pgrp: 17975
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | corecount: 8
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | event service: False
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | sizes: {0: 2283767, 1: 2284022, 2: 2284022, 12: 2284050, 23: 2284078, 34: 2284106, 44: 2284262, 55: 2284290, 66: 2284318, 77: 2284346, 87: 2284402, 89: 2284972, 98
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | --------------------------------------------------
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | 
[2025-12-17 08:23:16] 2025-12-17 07:22:18,813 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 08:23:16] 2025-12-17 07:22:18,927 | INFO     | job 6931598084 has completed (purged errors)
[2025-12-17 08:23:16] 2025-12-17 07:22:18,927 | INFO     | overall cleanup function is called
[2025-12-17 08:23:16] 2025-12-17 07:22:19,936 | INFO     | --- collectZombieJob: --- 10, [17975]
[2025-12-17 08:23:16] 2025-12-17 07:22:19,936 | INFO     | zombie collector waiting for pid 17975
[2025-12-17 08:23:16] 2025-12-17 07:22:19,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 08:23:16] 2025-12-17 07:22:19,936 | INFO     | collected zombie processes
[2025-12-17 08:23:16] 2025-12-17 07:22:19,936 | INFO     | will attempt to kill all subprocesses of pid=17975
[2025-12-17 08:23:16] 2025-12-17 07:22:20,043 | INFO     | process IDs to be killed: [17975] (in reverse order)
[2025-12-17 08:23:16] 2025-12-17 07:22:20,127 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 08:23:16] 2025-12-17 07:22:20,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 08:23:16] 2025-12-17 07:22:20,131 | INFO     | did not find any defunct processes belonging to 17975
[2025-12-17 08:23:16] 2025-12-17 07:22:20,135 | INFO     | did not find any defunct processes belonging to 17975
[2025-12-17 08:23:16] 2025-12-17 07:22:20,135 | INFO     | ready for new job
[2025-12-17 08:23:16] 2025-12-17 07:22:20,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 08:23:16] 2025-12-17 07:22:20,137 | INFO     | ***************************************
[2025-12-17 08:23:16] 2025-12-17 07:22:20,138 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 08:23:16] 2025-12-17 07:22:20,138 | INFO     | ***************************************
[2025-12-17 08:23:16] 2025-12-17 07:22:20,138 | INFO     | 
[2025-12-17 08:23:16] 2025-12-17 07:22:20,138 | INFO     | pilot is running in a VM
[2025-12-17 08:23:16] 2025-12-17 07:22:20,138 | INFO     | architecture information:
[2025-12-17 08:23:16] 2025-12-17 07:22:20,139 | INFO     | executing command: cat /etc/os-release
[2025-12-17 08:23:16] 2025-12-17 07:22:20,160 | INFO     | cat /etc/os-release:
[2025-12-17 08:23:16] NAME="CentOS Linux"
[2025-12-17 08:23:16] VERSION="7 (Core)"
[2025-12-17 08:23:16] ID="centos"
[2025-12-17 08:23:16] ID_LIKE="rhel fedora"
[2025-12-17 08:23:16] VERSION_ID="7"
[2025-12-17 08:23:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 08:23:16] ANSI_COLOR="0;31"
[2025-12-17 08:23:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 08:23:16] HOME_URL="https://www.centos.org/"
[2025-12-17 08:23:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 08:23:16] 
[2025-12-17 08:23:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 08:23:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 08:23:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 08:23:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 08:23:16] 
[2025-12-17 08:23:16] 2025-12-17 07:22:20,161 | INFO     | ***************************************
[2025-12-17 08:23:16] 2025-12-17 07:22:20,663 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-17 08:23:16] 2025-12-17 07:22:20,837 | INFO     | sufficient remaining disk space (495040069632 B)
[2025-12-17 08:23:16] 2025-12-17 07:22:20,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 08:23:16] 2025-12-17 07:22:20,838 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 08:23:16] 2025-12-17 07:22:20,838 | INFO     | update_server=False
[2025-12-17 08:23:16] 2025-12-17 07:22:20,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 08:23:16] 2025-12-17 07:22:20,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 08:23:16] 2025-12-17 07:22:21,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:23:16] 2025-12-17 07:22:21,157 | INFO     | aborting loop
[2025-12-17 08:23:16] 2025-12-17 07:22:21,159 | INFO     | all payload control threads have been joined
[2025-12-17 08:23:16] 2025-12-17 07:22:21,182 | INFO     | all job control threads have been joined
[2025-12-17 08:23:16] 2025-12-17 07:22:21,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 08:23:16] 2025-12-17 07:22:21,660 | INFO     | all data control threads have been joined
[2025-12-17 08:23:16] 2025-12-17 07:22:21,844 | INFO     | [job] retrieve thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,080 | INFO     | [payload] failed_post thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,163 | INFO     | [job] job monitor thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,165 | INFO     | [payload] control thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,188 | INFO     | [job] control thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,397 | INFO     | [data] copytool_in thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,421 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,441 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,666 | INFO     | [data] control thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,815 | INFO     | [job] validate thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:22,846 | INFO     | [data] copytool_out thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:23,143 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:23,196 | INFO     | [payload] validate_post thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:23,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 08:23:16] 2025-12-17 07:22:24,724 | INFO     | [job] queue monitor thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:25,576 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 08:23:16] 2025-12-17 07:22:51,229 | INFO     | PID=11443 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 08:23:16] 2025-12-17 07:22:51,229 | INFO     | .. there are 9 such processes running
[2025-12-17 08:23:16] 2025-12-17 07:22:51,229 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 08:23:16] 2025-12-17 07:22:51,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 08:23:16] 2025-12-17 07:22:51,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 08:23:16] 2025-12-17 07:23:06,964 | INFO     | [monitor] cgroup control has ended
[2025-12-17 08:23:16] 2025-12-17 07:23:07,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695993542464)>', '<ExcThread(monitor, started 140695310415616)>']
[2025-12-17 08:23:16] 2025-12-17 07:23:08,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 08:23:16] 2025-12-17 07:23:08,334 | INFO     | [monitor] control thread has ended
[2025-12-17 08:23:16] 2025-12-17 07:23:12,855 | INFO     | all workflow threads have been joined
[2025-12-17 08:23:16] 2025-12-17 07:23:12,855 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 08:23:16] 2025-12-17 07:23:12,855 | INFO     | traces error code: 0
[2025-12-17 08:23:16] 2025-12-17 07:23:12,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 08:23:16] 2025-12-17 07:23:13,271 [wrapper] ==== pilot stdout END ====
[2025-12-17 08:23:16] 2025-12-17 07:23:13,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 08:23:16] 2025-12-17 07:23:13,456 [wrapper] pilotpid: 11443
[2025-12-17 08:23:16] 2025-12-17 07:23:13,522 [wrapper] Pilot exit status: 0
[2025-12-17 08:23:16] 2025-12-17 07:23:13,819 [wrapper] pandaids: 6931598084
[2025-12-17 08:23:16] 2025-12-17 07:23:14,804 [wrapper] cleanup supervisor_pilot 20588 11444
[2025-12-17 08:23:16] 2025-12-17 07:23:14,808 [wrapper] Test setup, not cleaning
[2025-12-17 08:23:16] 2025-12-17 07:23:14,811 [wrapper] apfmon messages muted
[2025-12-17 08:23:16] 2025-12-17 07:23:14,814 [wrapper] ==== wrapper stdout END ====
[2025-12-17 08:23:16] 2025-12-17 07:23:14,817 [wrapper] ==== wrapper stderr END ====
[2025-12-17 08:23:16]  *** Error codes and diagnostics ***
[2025-12-17 08:23:16]     "exeErrorCode": 0,
[2025-12-17 08:23:16]     "exeErrorDiag": "",
[2025-12-17 08:23:16]     "pilotErrorCode": 0,
[2025-12-17 08:23:16]     "pilotErrorDiag": "",
[2025-12-17 08:23:16]  *** Listing of results directory ***
[2025-12-17 08:23:16] total 342408
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc    579449 Dec 16 18:35 pilot3.tar.gz
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc      5112 Dec 16 18:36 queuedata.json
[2025-12-17 08:23:16] -rwx------. 1 boinc boinc     36322 Dec 16 18:37 runpilot2-wrapper.sh
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc       100 Dec 17 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 08:23:16] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 03:38 run_atlas
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc       105 Dec 17 03:38 job.xml
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc      6392 Dec 17 03:38 init_data.xml
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc 193240940 Dec 17 03:38 EVNT.47886829._000576.pool.root.1
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc     15847 Dec 17 03:38 start_atlas.sh
[2025-12-17 08:23:16] drwxrwx--x. 2 boinc boinc        68 Dec 17 03:38 shared
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc    592408 Dec 17 03:38 input.tar.gz
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc         0 Dec 17 03:38 boinc_lockfile
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc      2539 Dec 17 03:38 pandaJob.out
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc    987409 Dec 17 03:41 agis_schedconf.cvmfs.json
[2025-12-17 08:23:16] drwx------. 5 boinc boinc      4096 Dec 17 03:41 pilot3
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc 148002357 Dec 17 08:20 HITS.47886831._014631.pool.root.1
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc       531 Dec 17 08:20 boinc_task_state.xml
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc      1014 Dec 17 08:20 memory_monitor_summary.json
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc   1516240 Dec 17 08:20 agis_ddmendpoints.agis.ALL.json
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc    494134 Dec 17 08:20 log.47886831._014631.job.log.tgz.1
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc        95 Dec 17 08:22 pilot_heartbeat.json
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc      7774 Dec 17 08:22 heartbeat.json
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc      4885 Dec 17 08:23 pilotlog.txt
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc   2248534 Dec 17 08:23 log.47886831._014631.job.log.1
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc       357 Dec 17 08:23 output.list
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc       620 Dec 17 08:23 runtime_log
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc   2764800 Dec 17 08:23 result.tar.gz
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc        28 Dec 17 08:23 wrapper_checkpoint.txt
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc      8192 Dec 17 08:23 boinc_mmap_file
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc      8833 Dec 17 08:23 runtime_log.err
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc       657 Dec 17 08:23 DTNNDm49np8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdxVKDmzAaQFn.diag
[2025-12-17 08:23:16] -rw-r--r--. 1 boinc boinc     20777 Dec 17 08:23 stderr.txt
[2025-12-17 08:23:16] HITS file was successfully produced:
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc 148002357 Dec 17 08:20 shared/HITS.pool.root.1
[2025-12-17 08:23:16]  *** Contents of shared directory: ***
[2025-12-17 08:23:16] total 336544
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc 193240940 Dec 17 03:38 ATLAS.root_0
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc     15847 Dec 17 03:38 start_atlas.sh
[2025-12-17 08:23:16] -rw-r--r--. 2 boinc boinc    592408 Dec 17 03:38 input.tar.gz
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc 148002357 Dec 17 08:20 HITS.pool.root.1
[2025-12-17 08:23:16] -rw-------. 1 boinc boinc   2764800 Dec 17 08:23 result.tar.gz
08:23:17 (7682): run_atlas exited; CPU time 60795.007278
08:23:17 (7682): called boinc_finish(0)

</stderr_txt>
]]>

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