Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:29:28 (395714): wrapper (7.7.26015): starting
17:29:28 (395714): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 17:29:28] Arguments: --nthreads 8
[2025-12-16 17:29:28] Threads: 8
[2025-12-16 17:29:28] Checking for CVMFS
[2025-12-16 17:29:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 17:29:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 17:29:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 17:29:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 17:29:31] 2.13.3.0 11393 59452 335788 154090 3 302 17314495 32935937 18329 16776704 0 187828351 99.349 323210545 40706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 17:29:31] CVMFS is ok
[2025-12-16 17:29:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 17:29:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 17:29:31] Further information can be found at the LHC@home message board.
[2025-12-16 17:29:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 17:29:31] Checking for apptainer binary...
[2025-12-16 17:29:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 17:29:31] Running /usr/bin/apptainer --version
[2025-12-16 17:29:31] apptainer version 1.4.5-2.el9
[2025-12-16 17:29:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 17:29:32] c6-5-37-2.aglt2.org
[2025-12-16 17:29:32] apptainer works
[2025-12-16 17:29:32] Set ATHENA_PROC_NUMBER=8
[2025-12-16 17:29:32] Set ATHENA_CORE_NUMBER=8
[2025-12-16 17:29:32] Starting ATLAS job with PandaID=6931597556
[2025-12-16 17:29:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 21:17:22]  *** The last 200 lines of the pilot log: ***
[2025-12-16 21:17:22] 2025-12-17 02:16:29,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,269 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 21:17:22] 2025-12-17 02:16:31,291 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3065.293321428571
[2025-12-16 21:17:22] 2025-12-17 02:16:31,346 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931597556/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,369 | INFO     | time since job start (13539s) is within the limit (174528.0s)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,369 | INFO     | extracted standard info from prmon json
[2025-12-16 21:17:22] 2025-12-17 02:16:31,370 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 21:17:22] 2025-12-17 02:16:31,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 21:17:22] 2025-12-17 02:16:31,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 21:17:22] 2025-12-17 02:16:31,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 21:17:22] 2025-12-17 02:16:31,414 | INFO     | fitting pss+swap vs Time
[2025-12-16 21:17:22] 2025-12-17 02:16:31,415 | INFO     | sum of square deviations: 3256835364.1735144
[2025-12-16 21:17:22] 2025-12-17 02:16:31,416 | INFO     | sum of deviations: -31708508874.940636
[2025-12-16 21:17:22] 2025-12-17 02:16:31,416 | INFO     | mean x: 1765931066.091324
[2025-12-16 21:17:22] 2025-12-17 02:16:31,416 | INFO     | mean y: 2507602.3470319635
[2025-12-16 21:17:22] 2025-12-17 02:16:31,416 | INFO     | intersect: 17195590647.82666
[2025-12-16 21:17:22] 2025-12-17 02:16:31,416 | INFO     | chi2: 3.1814355517378776
[2025-12-16 21:17:22] 2025-12-17 02:16:31,417 | INFO     | sum of square deviations: 3038832373.4392543
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | sum of deviations: -15503056445.392517
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | mean x: 1765930913.598131
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | mean y: 2518741.0186915887
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | intersect: 9011678598.424913
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | chi2: 2.3216471261331773
[2025-12-16 21:17:22] 2025-12-17 02:16:31,418 | INFO     | current chi2=2.3216471261331773 (change=27.025171864161635 %)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,424 | INFO     | sum of square deviations: 2830783057.6841974
[2025-12-16 21:17:22] 2025-12-17 02:16:31,425 | INFO     | sum of deviations: -14909101309.684204
[2025-12-16 21:17:22] 2025-12-17 02:16:31,425 | INFO     | mean x: 1765930761.1052632
[2025-12-16 21:17:22] 2025-12-17 02:16:31,425 | INFO     | mean y: 2519176.4401913877
[2025-12-16 21:17:22] 2025-12-17 02:16:31,425 | INFO     | intersect: 9303281575.641787
[2025-12-16 21:17:22] 2025-12-17 02:16:31,426 | INFO     | chi2: 2.320282004254094
[2025-12-16 21:17:22] 2025-12-17 02:16:31,426 | INFO     | current chi2=2.320282004254094 (change=0.05879971438022924 %)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,426 | INFO     | right removable region: 208
[2025-12-16 21:17:22] 2025-12-17 02:16:31,447 | INFO     | sum of square deviations: 3038739770.579443
[2025-12-16 21:17:22] 2025-12-17 02:16:31,448 | INFO     | sum of deviations: -72595991450.01866
[2025-12-16 21:17:22] 2025-12-17 02:16:31,448 | INFO     | mean x: 1765931218.6168225
[2025-12-16 21:17:22] 2025-12-17 02:16:31,448 | INFO     | mean y: 2535940.0607476635
[2025-12-16 21:17:22] 2025-12-17 02:16:31,448 | INFO     | intersect: 42190922352.49188
[2025-12-16 21:17:22] 2025-12-17 02:16:31,449 | INFO     | chi2: 1.2631216750785759
[2025-12-16 21:17:22] 2025-12-17 02:16:31,449 | INFO     | current chi2=1.2631216750785759 (change=60.29711573479499 %)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,449 | INFO     | sum of square deviations: 2830637011.511981
[2025-12-16 21:17:22] 2025-12-17 02:16:31,450 | INFO     | sum of deviations: -67070792615.191345
[2025-12-16 21:17:22] 2025-12-17 02:16:31,450 | INFO     | mean x: 1765931371.1291866
[2025-12-16 21:17:22] 2025-12-17 02:16:31,450 | INFO     | mean y: 2531845.933014354
[2025-12-16 21:17:22] 2025-12-17 02:16:31,450 | INFO     | intersect: 41845557385.40348
[2025-12-16 21:17:22] 2025-12-17 02:16:31,455 | INFO     | chi2: 1.2459185262725048
[2025-12-16 21:17:22] 2025-12-17 02:16:31,455 | INFO     | current chi2=1.2459185262725048 (change=1.3619549997034872 %)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,455 | INFO     | left removable region: 20
[2025-12-16 21:17:22] 2025-12-17 02:16:31,455 | INFO     | sum of square deviations: 2060266522.1861737
[2025-12-16 21:17:22] 2025-12-17 02:16:31,456 | INFO     | sum of deviations: -29467381423.941475
[2025-12-16 21:17:22] 2025-12-17 02:16:31,456 | INFO     | mean x: 1765931340.6223404
[2025-12-16 21:17:22] 2025-12-17 02:16:31,456 | INFO     | mean y: 2528052.3670212766
[2025-12-16 21:17:22] 2025-12-17 02:16:31,456 | INFO     | intersect: 25260120612.47586
[2025-12-16 21:17:22] 2025-12-17 02:16:31,457 | INFO     | chi2: 0.27001642908164
[2025-12-16 21:17:22] 2025-12-17 02:16:31,457 | INFO     | current memory leak: -14.30 B/s (using 188 data points, chi2=0.27)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,457 | INFO     | could have reported an average CPU frequency of 2898 MHz (11 samples)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,457 | INFO     | ..............................
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . Timing measurements:
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . get job = 0 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . initial setup = 5 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . payload setup = 46 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . stage-in = 0 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . payload execution = 13362 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . stage-out = 5 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | . log creation = 1 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,458 | INFO     | ..............................
[2025-12-16 21:17:22] 2025-12-17 02:16:31,716 | INFO     | 
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | job summary report
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | --------------------------------------------------
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | PanDA job id: 6931597556
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | task id: 47886831
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | errors: (none)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | pilot state: finished 
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | transexitcode: 0
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | exeerrorcode: 0
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | exeerrordiag: 
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | exitcode: 0
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | exitmsg: OK
[2025-12-16 21:17:22] 2025-12-17 02:16:31,717 | INFO     | cpuconsumptiontime: 41742 s
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | nevents: 400
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | neventsw: 0
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | pid: 414045
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | pgrp: 414045
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | corecount: 8
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | event service: False
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | sizes: {0: 2283822, 1: 2284021, 2: 2284021, 13: 2284049, 25: 2284105, 36: 2284133, 39: 2284551, 48: 2284579, 13413: 2314857, 13420: 2323855, 13423: 2323911, 13454:
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | --------------------------------------------------
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | 
[2025-12-16 21:17:22] 2025-12-17 02:16:31,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 21:17:22] 2025-12-17 02:16:31,815 | INFO     | job 6931597556 has completed (purged errors)
[2025-12-16 21:17:22] 2025-12-17 02:16:31,815 | INFO     | overall cleanup function is called
[2025-12-16 21:17:22] 2025-12-17 02:16:32,823 | INFO     | --- collectZombieJob: --- 10, [414045]
[2025-12-16 21:17:22] 2025-12-17 02:16:32,824 | INFO     | zombie collector waiting for pid 414045
[2025-12-16 21:17:22] 2025-12-17 02:16:32,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 21:17:22] 2025-12-17 02:16:32,824 | INFO     | collected zombie processes
[2025-12-16 21:17:22] 2025-12-17 02:16:32,824 | INFO     | will attempt to kill all subprocesses of pid=414045
[2025-12-16 21:17:22] 2025-12-17 02:16:34,464 | INFO     | process IDs to be killed: [414045] (in reverse order)
[2025-12-16 21:17:22] 2025-12-17 02:16:35,402 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 21:17:22] 2025-12-17 02:16:35,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 21:17:22] 2025-12-17 02:16:35,498 | INFO     | did not find any defunct processes belonging to 414045
[2025-12-16 21:17:22] 2025-12-17 02:16:35,539 | INFO     | did not find any defunct processes belonging to 414045
[2025-12-16 21:17:22] 2025-12-17 02:16:35,559 | INFO     | ready for new job
[2025-12-16 21:17:22] 2025-12-17 02:16:35,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 21:17:22] 2025-12-17 02:16:35,561 | INFO     | ***************************************
[2025-12-16 21:17:22] 2025-12-17 02:16:35,561 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 21:17:22] 2025-12-17 02:16:35,561 | INFO     | ***************************************
[2025-12-16 21:17:22] 2025-12-17 02:16:35,561 | INFO     | 
[2025-12-16 21:17:22] 2025-12-17 02:16:35,588 | INFO     | architecture information:
[2025-12-16 21:17:22] 2025-12-17 02:16:35,598 | INFO     | executing command: cat /etc/os-release
[2025-12-16 21:17:22] 2025-12-17 02:16:35,659 | INFO     | cat /etc/os-release:
[2025-12-16 21:17:22] NAME="CentOS Linux"
[2025-12-16 21:17:22] VERSION="7 (Core)"
[2025-12-16 21:17:22] ID="centos"
[2025-12-16 21:17:22] ID_LIKE="rhel fedora"
[2025-12-16 21:17:22] VERSION_ID="7"
[2025-12-16 21:17:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 21:17:22] ANSI_COLOR="0;31"
[2025-12-16 21:17:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 21:17:22] HOME_URL="https://www.centos.org/"
[2025-12-16 21:17:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 21:17:22] 
[2025-12-16 21:17:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 21:17:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 21:17:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 21:17:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 21:17:22] 
[2025-12-16 21:17:22] 2025-12-17 02:16:35,659 | INFO     | ***************************************
[2025-12-16 21:17:22] 2025-12-17 02:16:36,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-16 21:17:22] 2025-12-17 02:16:36,363 | INFO     | sufficient remaining disk space (75677827072 B)
[2025-12-16 21:17:22] 2025-12-17 02:16:36,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 21:17:22] 2025-12-17 02:16:36,363 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 21:17:22] 2025-12-17 02:16:36,363 | INFO     | update_server=False
[2025-12-16 21:17:22] 2025-12-17 02:16:36,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 21:17:22] 2025-12-17 02:16:36,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:17:22] 2025-12-17 02:16:36,368 | INFO     | aborting loop
[2025-12-16 21:17:22] 2025-12-17 02:16:36,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:17:22] 2025-12-17 02:16:36,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 21:17:22] 2025-12-17 02:16:36,947 | INFO     | all job control threads have been joined
[2025-12-16 21:17:22] 2025-12-17 02:16:37,370 | INFO     | [job] retrieve thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,374 | INFO     | [job] job monitor thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,382 | INFO     | all data control threads have been joined
[2025-12-16 21:17:22] 2025-12-17 02:16:37,406 | INFO     | [job] validate thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,727 | INFO     | all payload control threads have been joined
[2025-12-16 21:17:22] 2025-12-17 02:16:37,741 | INFO     | [job] queue monitor thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,780 | INFO     | [payload] validate_post thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,914 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:37,954 | INFO     | [job] control thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,032 | INFO     | [data] copytool_in thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,036 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,136 | INFO     | [payload] failed_post thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,389 | INFO     | [data] control thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,734 | INFO     | [payload] control thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,785 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:38,915 | INFO     | [data] copytool_out thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:16:39,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 21:17:22] 2025-12-17 02:16:43,040 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 21:17:22] 2025-12-17 02:17:05,665 | INFO     | PID=402965 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 21:17:22] 2025-12-17 02:17:05,668 | INFO     | .. there are 17 such processes running
[2025-12-16 21:17:22] 2025-12-17 02:17:05,669 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 21:17:22] 2025-12-17 02:17:05,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 21:17:22] 2025-12-17 02:17:05,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 21:17:22] 2025-12-17 02:17:15,648 | INFO     | [monitor] cgroup control has ended
[2025-12-16 21:17:22] 2025-12-17 02:17:16,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140133267130176)>', '<ExcThread(monitor, started 140132602590976)>']
[2025-12-16 21:17:22] 2025-12-17 02:17:16,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 21:17:22] 2025-12-17 02:17:16,734 | INFO     | [monitor] control thread has ended
[2025-12-16 21:17:22] 2025-12-17 02:17:21,271 | INFO     | all workflow threads have been joined
[2025-12-16 21:17:22] 2025-12-17 02:17:21,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 21:17:22] 2025-12-17 02:17:21,272 | INFO     | traces error code: 0
[2025-12-16 21:17:22] 2025-12-17 02:17:21,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 21:17:22] 2025-12-17 02:17:21,720 [wrapper] ==== pilot stdout END ====
[2025-12-16 21:17:22] 2025-12-17 02:17:21,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 21:17:22] 2025-12-17 02:17:21,803 [wrapper] pilotpid: 402965
[2025-12-16 21:17:22] 2025-12-17 02:17:21,849 [wrapper] Pilot exit status: 0
[2025-12-16 21:17:22] 2025-12-17 02:17:21,974 [wrapper] pandaids: 6931597556
[2025-12-16 21:17:22] 2025-12-17 02:17:22,147 [wrapper] cleanup supervisor_pilot 1066079 402966
[2025-12-16 21:17:22] 2025-12-17 02:17:22,159 [wrapper] Test setup, not cleaning
[2025-12-16 21:17:22] 2025-12-17 02:17:22,189 [wrapper] apfmon messages muted
[2025-12-16 21:17:22] 2025-12-17 02:17:22,221 [wrapper] ==== wrapper stdout END ====
[2025-12-16 21:17:22] 2025-12-17 02:17:22,249 [wrapper] ==== wrapper stderr END ====
[2025-12-16 21:17:22]  *** Error codes and diagnostics ***
[2025-12-16 21:17:22]     "exeErrorCode": 0,
[2025-12-16 21:17:22]     "exeErrorDiag": "",
[2025-12-16 21:17:22]     "pilotErrorCode": 0,
[2025-12-16 21:17:22]     "pilotErrorDiag": "",
[2025-12-16 21:17:22]  *** Listing of results directory ***
[2025-12-16 21:17:22] total 340884
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:35 pilot3.tar.gz
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:36 queuedata.json
[2025-12-16 21:17:22] -rwx------. 1 boincer umatlas     36322 Dec 16 12:36 runpilot2-wrapper.sh
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas       100 Dec 16 17:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 21:17:22] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 17:29 run_atlas
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas       105 Dec 16 17:29 job.xml
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas 190410138 Dec 16 17:29 EVNT.47886829._000509.pool.root.1
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 17:29 start_atlas.sh
[2025-12-16 21:17:22] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 17:29 shared
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas    592411 Dec 16 17:29 input.tar.gz
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas         0 Dec 16 17:29 boinc_lockfile
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas      2539 Dec 16 17:29 pandaJob.out
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas        57 Dec 16 17:29 setup.sh.local
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas    987393 Dec 16 17:30 agis_schedconf.cvmfs.json
[2025-12-16 21:17:22] drwx------. 5 boincer umatlas      4096 Dec 16 17:30 pilot3
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas      6845 Dec 16 21:12 init_data.xml
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas 150330975 Dec 16 21:15 HITS.47886831._014375.pool.root.1
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas       531 Dec 16 21:15 boinc_task_state.xml
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas      1042 Dec 16 21:15 memory_monitor_summary.json
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas   1516240 Dec 16 21:15 agis_ddmendpoints.agis.ALL.json
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas    444205 Dec 16 21:15 log.47886831._014375.job.log.tgz.1
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas      7824 Dec 16 21:16 heartbeat.json
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas        95 Dec 16 21:17 pilot_heartbeat.json
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 21:17 boinc_mmap_file
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas        28 Dec 16 21:17 wrapper_checkpoint.txt
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas      4823 Dec 16 21:17 pilotlog.txt
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas   1758998 Dec 16 21:17 log.47886831._014375.job.log.1
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas       357 Dec 16 21:17 output.list
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas       620 Dec 16 21:17 runtime_log
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas   2222080 Dec 16 21:17 result.tar.gz
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 21:17 runtime_log.err
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas       656 Dec 16 21:17 pxPLDmu9np8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOwVKDmXXhsHm.diag
[2025-12-16 21:17:22] -rw-r--r--. 1 boincer umatlas     21241 Dec 16 21:17 stderr.txt
[2025-12-16 21:17:22] HITS file was successfully produced:
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas 150330975 Dec 16 21:15 shared/HITS.pool.root.1
[2025-12-16 21:17:22]  *** Contents of shared directory: ***
[2025-12-16 21:17:22] total 335532
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas 190410138 Dec 16 17:29 ATLAS.root_0
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 17:29 start_atlas.sh
[2025-12-16 21:17:22] -rw-r--r--. 2 boincer umatlas    592411 Dec 16 17:29 input.tar.gz
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas 150330975 Dec 16 21:15 HITS.pool.root.1
[2025-12-16 21:17:22] -rw-------. 1 boincer umatlas   2222080 Dec 16 21:17 result.tar.gz
21:17:23 (395714): run_atlas exited; CPU time 42128.082239
21:17:23 (395714): called boinc_finish(0)

</stderr_txt>
]]>

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