Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:44 (888733): wrapper (7.7.26015): starting
15:04:44 (888733): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 15:04:44] Arguments: --nthreads 3
[2025-12-17 15:04:44] Threads: 3
[2025-12-17 15:04:44] Checking for CVMFS
[2025-12-17 15:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 15:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 15:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 15:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 15:04:45] 2.9.2.0 3520241 5847 83700 154112 1 61 13858598 36864001 0 130560 0 4128671 99.990 211098 18769 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 15:04:45] CVMFS is ok
[2025-12-17 15:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 15:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 15:04:45] Further information can be found at the LHC@home message board.
[2025-12-17 15:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 15:04:45] Checking for apptainer binary...
[2025-12-17 15:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 15:04:45] Running /usr/bin/apptainer --version
[2025-12-17 15:04:45] apptainer version 1.4.1-1.1
[2025-12-17 15:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 15:04:45] thA373
[2025-12-17 15:04:45] apptainer works
[2025-12-17 15:04:45] Set ATHENA_PROC_NUMBER=3
[2025-12-17 15:04:45] Set ATHENA_CORE_NUMBER=3
[2025-12-17 15:04:45] Starting ATLAS job with PandaID=6931597338
[2025-12-17 15:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 16:30:10]  *** The last 200 lines of the pilot log: ***
[2025-12-17 16:30:10] VERSION_ID="7"
[2025-12-17 16:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 16:30:10] ANSI_COLOR="0;31"
[2025-12-17 16:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 16:30:10] HOME_URL="https://www.centos.org/"
[2025-12-17 16:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 16:30:10] 
[2025-12-17 16:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 16:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 16:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 16:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 16:30:10] 
[2025-12-17 16:30:10] 2025-12-17 15:29:53,137 | INFO     | ***************************************
[2025-12-17 16:30:10] 2025-12-17 15:29:53,640 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | INFO     | sufficient remaining disk space (245526167552 B)
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | INFO     | update_server=False
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 16:30:10] 2025-12-17 15:29:53,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 16:30:10] 2025-12-17 15:29:53,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 16:30:10] 2025-12-17 15:29:53,654 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-17 16:30:10] 2025-12-17 15:29:53,654 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 16:30:10] 2025-12-17 15:29:53,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 16:30:10] 2025-12-17 15:29:53,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 16:30:10] 2025-12-17 15:29:53,932 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 16:30:10] 2025-12-17 15:29:53,932 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 16:30:10] 2025-12-17 15:29:53,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 16:30:10] 2025-12-17 15:29:53,932 | INFO     | will abort loop
[2025-12-17 16:30:10] 2025-12-17 15:29:54,349 | INFO     | all payload control threads have been joined
[2025-12-17 16:30:10] 2025-12-17 15:29:54,564 | INFO     | all data control threads have been joined
[2025-12-17 16:30:10] 2025-12-17 15:29:54,659 | INFO     | [job] retrieve thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:54,659 | INFO     | [job] queue monitor thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:54,938 | INFO     | [job] job monitor thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,042 | INFO     | [payload] validate_post thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,076 | INFO     | all job control threads have been joined
[2025-12-17 16:30:10] 2025-12-17 15:29:55,355 | INFO     | [payload] control thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,428 | INFO     | [payload] failed_post thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,543 | INFO     | [data] copytool_in thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,569 | INFO     | [data] control thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,660 | INFO     | [data] copytool_out thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,716 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:55,927 | INFO     | [monitor] cgroup control has ended
[2025-12-17 16:30:10] 2025-12-17 15:29:56,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 16:30:10] 2025-12-17 15:29:56,051 | INFO     | [job] validate thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:56,082 | INFO     | [job] control thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:56,141 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:29:56,153 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:30:00,027 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:30:03,717 | INFO     | job.realtimelogging is not enabled
[2025-12-17 16:30:10] 2025-12-17 15:30:04,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 16:30:10] 2025-12-17 15:30:05,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641038931776)>', '<ExcThread(monitor, started 139640686225152)>']
[2025-12-17 16:30:10] 2025-12-17 15:30:06,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 16:30:10] 2025-12-17 15:30:06,723 | INFO     | [monitor] control thread has ended
[2025-12-17 16:30:10] 2025-12-17 15:30:10,751 | INFO     | all workflow threads have been joined
[2025-12-17 16:30:10] 2025-12-17 15:30:10,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 16:30:10] 2025-12-17 15:30:10,752 | INFO     | traces error code: 0
[2025-12-17 16:30:10] 2025-12-17 15:30:10,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 16:30:10] 2025-12-17 15:30:10,801 [wrapper] ==== pilot stdout END ====
[2025-12-17 16:30:10] 2025-12-17 15:30:10,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 16:30:10] 2025-12-17 15:30:10,805 [wrapper] pilotpid: 892454
[2025-12-17 16:30:10] 2025-12-17 15:30:10,808 [wrapper] Pilot exit status: 0
[2025-12-17 16:30:10] 2025-12-17 15:30:10,815 [wrapper] pandaids: 6931597338
[2025-12-17 16:30:10] 2025-12-17 15:30:10,831 [wrapper] cleanup supervisor_pilot  910637 892455
[2025-12-17 16:30:10] 2025-12-17 15:30:10,833 [wrapper] Test setup, not cleaning
[2025-12-17 16:30:10] 2025-12-17 15:30:10,836 [wrapper] apfmon messages muted
[2025-12-17 16:30:10] 2025-12-17 15:30:10,838 [wrapper] ==== wrapper stdout END ====
[2025-12-17 16:30:10] 2025-12-17 15:30:10,840 [wrapper] ==== wrapper stderr END ====
[2025-12-17 16:30:10]  *** Error codes and diagnostics ***
[2025-12-17 16:30:10]     "exeErrorCode": 0,
[2025-12-17 16:30:10]     "exeErrorDiag": "",
[2025-12-17 16:30:10]     "pilotErrorCode": 0,
[2025-12-17 16:30:10]     "pilotErrorDiag": "",
[2025-12-17 16:30:10]  *** Listing of results directory ***
[2025-12-17 16:30:10] total 342640
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc    579449 Dec 16 18:35 pilot3.tar.gz
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      5112 Dec 16 18:36 queuedata.json
[2025-12-17 16:30:10] -rwx------ 1 boinc boinc     36322 Dec 16 18:36 runpilot2-wrapper.sh
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc       100 Dec 17 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 16:30:10] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 15:04 run_atlas
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc       105 Dec 17 15:04 job.xml
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc 192616313 Dec 17 15:04 EVNT.47886829._000500.pool.root.1
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc    592413 Dec 17 15:04 input.tar.gz
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc     15847 Dec 17 15:04 start_atlas.sh
[2025-12-17 16:30:10] drwxrwx--x 2 boinc boinc      4096 Dec 17 15:04 shared
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc         0 Dec 17 15:04 boinc_setup_complete
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      6439 Dec 17 15:04 init_data.xml
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc         0 Dec 17 15:04 boinc_lockfile
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      2539 Dec 17 15:04 pandaJob.out
[2025-12-17 16:30:10] -rw------- 1 boinc boinc    987423 Dec 17 15:04 agis_schedconf.cvmfs.json
[2025-12-17 16:30:10] -rw------- 1 boinc boinc   1516240 Dec 17 15:04 agis_ddmendpoints.agis.ALL.json
[2025-12-17 16:30:10] drwx------ 5 boinc boinc      4096 Dec 17 15:04 pilot3
[2025-12-17 16:30:10] -rw------- 1 boinc boinc        95 Dec 17 16:29 pilot_heartbeat.json
[2025-12-17 16:30:10] -rw------- 1 boinc boinc 152315371 Dec 17 16:29 HITS.47886831._014157.pool.root.1
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc       529 Dec 17 16:29 boinc_task_state.xml
[2025-12-17 16:30:10] -rw------- 1 boinc boinc      1015 Dec 17 16:29 memory_monitor_summary.json
[2025-12-17 16:30:10] -rw------- 1 boinc boinc    263270 Dec 17 16:29 log.47886831._014157.job.log.tgz.1
[2025-12-17 16:30:10] -rw------- 1 boinc boinc      7752 Dec 17 16:29 heartbeat.json
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc        27 Dec 17 16:30 wrapper_checkpoint.txt
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      8192 Dec 17 16:30 boinc_mmap_file
[2025-12-17 16:30:10] -rw------- 1 boinc boinc      4814 Dec 17 16:30 pilotlog.txt
[2025-12-17 16:30:10] -rw------- 1 boinc boinc    746773 Dec 17 16:30 log.47886831._014157.job.log.1
[2025-12-17 16:30:10] -rw------- 1 boinc boinc       357 Dec 17 16:30 output.list
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc       620 Dec 17 16:30 runtime_log
[2025-12-17 16:30:10] -rw------- 1 boinc boinc   1034240 Dec 17 16:30 result.tar.gz
[2025-12-17 16:30:10] -rw------- 1 boinc boinc       658 Dec 17 16:30 xddNDmt9np8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaPaKDmywv9nm.diag
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      8897 Dec 17 16:30 runtime_log.err
[2025-12-17 16:30:10] -rw-r--r-- 1 boinc boinc      8789 Dec 17 16:30 stderr.txt
[2025-12-17 16:30:10] HITS file was successfully produced:
[2025-12-17 16:30:10] -rw------- 1 boinc boinc 152315371 Dec 17 16:29 shared/HITS.pool.root.1
[2025-12-17 16:30:10]  *** Contents of shared directory: ***
[2025-12-17 16:30:10] total 338468
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc 192616313 Dec 17 15:04 ATLAS.root_0
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc    592413 Dec 17 15:04 input.tar.gz
[2025-12-17 16:30:10] -rw-r--r-- 2 boinc boinc     15847 Dec 17 15:04 start_atlas.sh
[2025-12-17 16:30:10] -rw------- 1 boinc boinc 152315371 Dec 17 16:29 HITS.pool.root.1
[2025-12-17 16:30:10] -rw------- 1 boinc boinc   1034240 Dec 17 16:30 result.tar.gz
16:30:12 (888733): run_atlas exited; CPU time 14588.255525
16:30:12 (888733): called boinc_finish(0)

</stderr_txt>
]]>

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