Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:06:03 (6219): wrapper (7.7.26015): starting
05:06:03 (6219): wrapper: running run_atlas (--nthreads 8)
[2025-12-17 05:06:03] Arguments: --nthreads 8
[2025-12-17 05:06:03] Threads: 8
[2025-12-17 05:06:03] Checking for CVMFS
[2025-12-17 05:06:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 05:06:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 05:06:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 05:06:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 05:06:06] 2.11.2.0 24088 1793 69932 154097 0 269 24365263 25165825 4699 130560 0 1225162 99.755 1668042 1311 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-17 05:06:06] CVMFS is ok
[2025-12-17 05:06:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 05:06:07] Checking for apptainer binary...
[2025-12-17 05:06:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 05:06:07] Running /usr/bin/apptainer --version
[2025-12-17 05:06:07] apptainer version 1.3.2-1.el7
[2025-12-17 05:06:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 05:06:28] cg-vwn483.simple-grid.lan
[2025-12-17 05:06:28] apptainer works
[2025-12-17 05:06:28] Set ATHENA_PROC_NUMBER=8
[2025-12-17 05:06:28] Set ATHENA_CORE_NUMBER=8
[2025-12-17 05:06:28] Starting ATLAS job with PandaID=6931597490
[2025-12-17 05:06:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 09:29:24]  *** The last 200 lines of the pilot log: ***
[2025-12-17 09:29:24] 2025-12-17 08:28:19,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 09:29:24] 2025-12-17 08:28:19,815 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-17 09:29:24] 2025-12-17 08:28:19,817 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6931597490/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,817 | INFO     | extracted standard info from prmon json
[2025-12-17 09:29:24] 2025-12-17 08:28:19,817 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 09:29:24] 2025-12-17 08:28:19,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 09:29:24] 2025-12-17 08:28:19,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 09:29:24] 2025-12-17 08:28:19,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 09:29:24] 2025-12-17 08:28:19,823 | INFO     | fitting pss+swap vs Time
[2025-12-17 09:29:24] 2025-12-17 08:28:19,823 | INFO     | sum of square deviations: 4560048290.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,831 | INFO     | sum of deviations: 14037850883.000006
[2025-12-17 09:29:24] 2025-12-17 08:28:19,832 | INFO     | mean x: 1765952497.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,832 | INFO     | mean y: 2472786.06122449
[2025-12-17 09:29:24] 2025-12-17 08:28:19,832 | INFO     | intersect: -5433912147.342083
[2025-12-17 09:29:24] 2025-12-17 08:28:19,832 | INFO     | chi2: 5.2831506578056056
[2025-12-17 09:29:24] 2025-12-17 08:28:19,833 | INFO     | sum of square deviations: 4286517580.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,835 | INFO     | sum of deviations: 30663965193.99995
[2025-12-17 09:29:24] 2025-12-17 08:28:19,835 | INFO     | mean x: 1765952344.5
[2025-12-17 09:29:24] 2025-12-17 08:28:19,835 | INFO     | mean y: 2481902.7083333335
[2025-12-17 09:29:24] 2025-12-17 08:28:19,835 | INFO     | intersect: -12630407200.2475
[2025-12-17 09:29:24] 2025-12-17 08:28:19,835 | INFO     | chi2: 4.504915515064573
[2025-12-17 09:29:24] 2025-12-17 08:28:19,836 | INFO     | current chi2=4.504915515064573 (change=14.730512021102921 %)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,836 | INFO     | right removable region: 239
[2025-12-17 09:29:24] 2025-12-17 08:28:19,836 | INFO     | sum of square deviations: 4286517580.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,838 | INFO     | sum of deviations: -62240033955.50001
[2025-12-17 09:29:24] 2025-12-17 08:28:19,838 | INFO     | mean x: 1765952649.5
[2025-12-17 09:29:24] 2025-12-17 08:28:19,838 | INFO     | mean y: 2515242.6958333333
[2025-12-17 09:29:24] 2025-12-17 08:28:19,838 | INFO     | intersect: 25644064779.67107
[2025-12-17 09:29:24] 2025-12-17 08:28:19,839 | INFO     | chi2: 1.4993065330529618
[2025-12-17 09:29:24] 2025-12-17 08:28:19,839 | INFO     | current chi2=1.4993065330529618 (change=71.6209771372352 %)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,839 | INFO     | sum of square deviations: 4024149870.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,841 | INFO     | sum of deviations: -80441635435.00009
[2025-12-17 09:29:24] 2025-12-17 08:28:19,841 | INFO     | mean x: 1765952802.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,841 | INFO     | mean y: 2525716.9234042554
[2025-12-17 09:29:24] 2025-12-17 08:28:19,841 | INFO     | intersect: 35303430524.89987
[2025-12-17 09:29:24] 2025-12-17 08:28:19,842 | INFO     | chi2: 1.066677948340137
[2025-12-17 09:29:24] 2025-12-17 08:28:19,842 | INFO     | current chi2=1.066677948340137 (change=28.85524575364087 %)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,842 | INFO     | sum of square deviations: 3772712597.5
[2025-12-17 09:29:24] 2025-12-17 08:28:19,851 | INFO     | sum of deviations: -76198191571.5
[2025-12-17 09:29:24] 2025-12-17 08:28:19,851 | INFO     | mean x: 1765952954.5
[2025-12-17 09:29:24] 2025-12-17 08:28:19,852 | INFO     | mean y: 2523120.4217391303
[2025-12-17 09:29:24] 2025-12-17 08:28:19,852 | INFO     | intersect: 35669809736.00323
[2025-12-17 09:29:24] 2025-12-17 08:28:19,852 | INFO     | chi2: 1.058072068643104
[2025-12-17 09:29:24] 2025-12-17 08:28:19,852 | INFO     | current chi2=1.058072068643104 (change=0.8067926884984004 %)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,852 | INFO     | left removable region: 30
[2025-12-17 09:29:24] 2025-12-17 08:28:19,853 | INFO     | sum of square deviations: 2830787960.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,854 | INFO     | sum of deviations: -37096924726.99999
[2025-12-17 09:29:24] 2025-12-17 08:28:19,854 | INFO     | mean x: 1765953229.0
[2025-12-17 09:29:24] 2025-12-17 08:28:19,854 | INFO     | mean y: 2519142.5263157897
[2025-12-17 09:29:24] 2025-12-17 08:28:19,855 | INFO     | intersect: 23144992168.87605
[2025-12-17 09:29:24] 2025-12-17 08:28:19,855 | INFO     | chi2: 0.18692752382545316
[2025-12-17 09:29:24] 2025-12-17 08:28:19,855 | INFO     | current memory leak: -13.10 B/s (using 209 data points, chi2=0.19)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | ..............................
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . Timing measurements:
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . get job = 0 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . initial setup = 4 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . payload setup = 135 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . stage-in = 0 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . payload execution = 15093 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . stage-out = 5 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,856 | INFO     | . log creation = 1 s
[2025-12-17 09:29:24] 2025-12-17 08:28:19,857 | INFO     | ..............................
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | 
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | job summary report
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | --------------------------------------------------
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | PanDA job id: 6931597490
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | task id: 47886831
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | errors: (none)
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 09:29:24] 2025-12-17 08:28:20,011 | INFO     | pilot state: finished 
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | transexitcode: 0
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | exeerrorcode: 0
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | exeerrordiag: 
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | exitcode: 0
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | exitmsg: OK
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | cpuconsumptiontime: 56755 s
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | nevents: 400
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | neventsw: 0
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | pid: 16628
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | pgrp: 16628
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | corecount: 8
[2025-12-17 09:29:24] 2025-12-17 08:28:20,012 | INFO     | event service: False
[2025-12-17 09:29:24] 2025-12-17 08:28:20,013 | INFO     | sizes: {0: 2283165, 1: 2283767, 2: 2284050, 3: 2284050, 13: 2284078, 24: 2284134, 35: 2284290, 45: 2284318, 56: 2284346, 67: 2284374, 78: 2284402, 88: 2284738, 90:
[2025-12-17 09:29:24] 2025-12-17 08:28:20,013 | INFO     | --------------------------------------------------
[2025-12-17 09:29:24] 2025-12-17 08:28:20,013 | INFO     | 
[2025-12-17 09:29:24] 2025-12-17 08:28:20,013 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-12-17 09:29:24] 2025-12-17 08:28:20,364 | INFO     | time since job start (15514s) is within the limit (174528.0s)
[2025-12-17 09:29:24] 2025-12-17 08:28:20,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | job 6931597490 has completed (purged errors)
[2025-12-17 09:29:24] 2025-12-17 08:28:20,417 | INFO     | overall cleanup function is called
[2025-12-17 09:29:24] 2025-12-17 08:28:21,426 | INFO     | --- collectZombieJob: --- 10, [16628]
[2025-12-17 09:29:24] 2025-12-17 08:28:21,426 | INFO     | zombie collector waiting for pid 16628
[2025-12-17 09:29:24] 2025-12-17 08:28:21,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 09:29:24] 2025-12-17 08:28:21,426 | INFO     | collected zombie processes
[2025-12-17 09:29:24] 2025-12-17 08:28:21,426 | INFO     | will attempt to kill all subprocesses of pid=16628
[2025-12-17 09:29:24] 2025-12-17 08:28:21,545 | INFO     | process IDs to be killed: [16628] (in reverse order)
[2025-12-17 09:29:24] 2025-12-17 08:28:22,638 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 09:29:24] 2025-12-17 08:28:22,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 09:29:24] 2025-12-17 08:28:22,648 | INFO     | did not find any defunct processes belonging to 16628
[2025-12-17 09:29:24] 2025-12-17 08:28:22,651 | INFO     | did not find any defunct processes belonging to 16628
[2025-12-17 09:29:24] 2025-12-17 08:28:22,652 | INFO     | ready for new job
[2025-12-17 09:29:24] 2025-12-17 08:28:22,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 09:29:24] 2025-12-17 08:28:22,654 | INFO     | ***************************************
[2025-12-17 09:29:24] 2025-12-17 08:28:22,654 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 09:29:24] 2025-12-17 08:28:22,654 | INFO     | ***************************************
[2025-12-17 09:29:24] 2025-12-17 08:28:22,654 | INFO     | 
[2025-12-17 09:29:24] 2025-12-17 08:28:22,655 | INFO     | pilot is running in a VM
[2025-12-17 09:29:24] 2025-12-17 08:28:22,655 | INFO     | architecture information:
[2025-12-17 09:29:24] 2025-12-17 08:28:22,669 | INFO     | executing command: cat /etc/os-release
[2025-12-17 09:29:24] 2025-12-17 08:28:22,925 | INFO     | cat /etc/os-release:
[2025-12-17 09:29:24] NAME="CentOS Linux"
[2025-12-17 09:29:24] VERSION="7 (Core)"
[2025-12-17 09:29:24] ID="centos"
[2025-12-17 09:29:24] ID_LIKE="rhel fedora"
[2025-12-17 09:29:24] VERSION_ID="7"
[2025-12-17 09:29:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 09:29:24] ANSI_COLOR="0;31"
[2025-12-17 09:29:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 09:29:24] HOME_URL="https://www.centos.org/"
[2025-12-17 09:29:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 09:29:24] 
[2025-12-17 09:29:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 09:29:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 09:29:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 09:29:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 09:29:24] 
[2025-12-17 09:29:24] 2025-12-17 08:28:22,925 | INFO     | ***************************************
[2025-12-17 09:29:24] 2025-12-17 08:28:23,429 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-12-17 09:29:24] 2025-12-17 08:28:23,676 | INFO     | sufficient remaining disk space (495959670784 B)
[2025-12-17 09:29:24] 2025-12-17 08:28:23,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 09:29:24] 2025-12-17 08:28:23,677 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 09:29:24] 2025-12-17 08:28:23,677 | INFO     | update_server=False
[2025-12-17 09:29:24] 2025-12-17 08:28:23,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 09:29:24] 2025-12-17 08:28:23,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 09:29:24] 2025-12-17 08:28:23,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 09:29:24] 2025-12-17 08:28:24,054 | INFO     | all payload control threads have been joined
[2025-12-17 09:29:24] 2025-12-17 08:28:24,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:29:24] 2025-12-17 08:28:24,214 | INFO     | aborting loop
[2025-12-17 09:29:24] 2025-12-17 08:28:24,340 | INFO     | all data control threads have been joined
[2025-12-17 09:29:24] 2025-12-17 08:28:24,683 | INFO     | [job] retrieve thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:24,747 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:24,854 | INFO     | all job control threads have been joined
[2025-12-17 09:29:24] 2025-12-17 08:28:24,956 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 09:29:24] 2025-12-17 08:28:25,059 | INFO     | [payload] control thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,132 | INFO     | [payload] validate_post thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,220 | INFO     | [job] job monitor thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,268 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,346 | INFO     | [data] control thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,385 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,859 | INFO     | [job] validate thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,861 | INFO     | [job] control thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,899 | INFO     | [data] copytool_out thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:25,920 | INFO     | [data] copytool_in thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:26,032 | INFO     | [job] queue monitor thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:26,076 | INFO     | [payload] failed_post thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:27,874 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 09:29:24] 2025-12-17 08:28:53,544 | INFO     | PID=10102 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-17 09:29:24] 2025-12-17 08:28:53,544 | INFO     | .. there are 9 such processes running
[2025-12-17 09:29:24] 2025-12-17 08:28:53,545 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 09:29:24] 2025-12-17 08:28:53,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 09:29:24] 2025-12-17 08:28:53,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 09:29:24] 2025-12-17 08:29:12,476 | INFO     | [monitor] cgroup control has ended
[2025-12-17 09:29:24] 2025-12-17 08:29:14,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168093624128)>', '<ExcThread(monitor, started 140167666988800)>']
[2025-12-17 09:29:24] 2025-12-17 08:29:14,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 09:29:24] 2025-12-17 08:29:14,672 | INFO     | [monitor] control thread has ended
[2025-12-17 09:29:24] 2025-12-17 08:29:19,308 | INFO     | all workflow threads have been joined
[2025-12-17 09:29:24] 2025-12-17 08:29:19,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 09:29:24] 2025-12-17 08:29:19,308 | INFO     | traces error code: 0
[2025-12-17 09:29:24] 2025-12-17 08:29:19,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 09:29:24] 2025-12-17 08:29:19,611 [wrapper] ==== pilot stdout END ====
[2025-12-17 09:29:24] 2025-12-17 08:29:19,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 09:29:24] 2025-12-17 08:29:19,795 [wrapper] pilotpid: 10102
[2025-12-17 09:29:24] 2025-12-17 08:29:19,909 [wrapper] Pilot exit status: 0
[2025-12-17 09:29:24] 2025-12-17 08:29:20,432 [wrapper] pandaids: 6931597490
[2025-12-17 09:29:24] 2025-12-17 08:29:21,312 [wrapper] cleanup supervisor_pilot 26393 10103
[2025-12-17 09:29:24] 2025-12-17 08:29:21,349 [wrapper] Test setup, not cleaning
[2025-12-17 09:29:24] 2025-12-17 08:29:21,395 [wrapper] apfmon messages muted
[2025-12-17 09:29:24] 2025-12-17 08:29:21,434 [wrapper] ==== wrapper stdout END ====
[2025-12-17 09:29:24] 2025-12-17 08:29:21,481 [wrapper] ==== wrapper stderr END ====
[2025-12-17 09:29:24]  *** Error codes and diagnostics ***
[2025-12-17 09:29:24]     "exeErrorCode": 0,
[2025-12-17 09:29:24]     "exeErrorDiag": "",
[2025-12-17 09:29:24]     "pilotErrorCode": 0,
[2025-12-17 09:29:24]     "pilotErrorDiag": "",
[2025-12-17 09:29:24]  *** Listing of results directory ***
[2025-12-17 09:29:24] total 342464
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc    579449 Dec 16 18:35 pilot3.tar.gz
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc      5112 Dec 16 18:36 queuedata.json
[2025-12-17 09:29:24] -rwx------. 1 boinc boinc     36322 Dec 16 18:36 runpilot2-wrapper.sh
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc       100 Dec 17 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 09:29:24] -rwxr-xr-x. 1 boinc boinc      7986 Dec 17 05:06 run_atlas
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc       105 Dec 17 05:06 job.xml
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc      6393 Dec 17 05:06 init_data.xml
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc 190448166 Dec 17 05:06 EVNT.47886829._000506.pool.root.1
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 05:06 start_atlas.sh
[2025-12-17 09:29:24] drwxrwx--x. 2 boinc boinc        68 Dec 17 05:06 shared
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc    592411 Dec 17 05:06 input.tar.gz
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc         0 Dec 17 05:06 boinc_lockfile
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc      2539 Dec 17 05:06 pandaJob.out
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc    987409 Dec 17 05:09 agis_schedconf.cvmfs.json
[2025-12-17 09:29:24] drwx------. 5 boinc boinc      4096 Dec 17 05:09 pilot3
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc 151232286 Dec 17 09:25 HITS.47886831._014309.pool.root.1
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc       531 Dec 17 09:25 boinc_task_state.xml
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc      1018 Dec 17 09:26 memory_monitor_summary.json
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc   1516240 Dec 17 09:26 agis_ddmendpoints.agis.ALL.json
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc    478499 Dec 17 09:26 log.47886831._014309.job.log.tgz.1
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc      7788 Dec 17 09:28 heartbeat.json
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc        95 Dec 17 09:28 pilot_heartbeat.json
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc      4885 Dec 17 09:29 pilotlog.txt
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc   2075410 Dec 17 09:29 log.47886831._014309.job.log.1
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc      8192 Dec 17 09:29 boinc_mmap_file
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc        28 Dec 17 09:29 wrapper_checkpoint.txt
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc       357 Dec 17 09:29 output.list
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc       620 Dec 17 09:29 runtime_log
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc   2570240 Dec 17 09:29 result.tar.gz
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc      8833 Dec 17 09:29 runtime_log.err
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc       657 Dec 17 09:29 CEMKDmu9np8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgvVKDmdwt9kn.diag
[2025-12-17 09:29:24] -rw-r--r--. 1 boinc boinc     20773 Dec 17 09:29 stderr.txt
[2025-12-17 09:29:24] HITS file was successfully produced:
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc 151232286 Dec 17 09:25 shared/HITS.pool.root.1
[2025-12-17 09:29:24]  *** Contents of shared directory: ***
[2025-12-17 09:29:24] total 336784
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc 190448166 Dec 17 05:06 ATLAS.root_0
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc     15847 Dec 17 05:06 start_atlas.sh
[2025-12-17 09:29:24] -rw-r--r--. 2 boinc boinc    592411 Dec 17 05:06 input.tar.gz
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc 151232286 Dec 17 09:25 HITS.pool.root.1
[2025-12-17 09:29:24] -rw-------. 1 boinc boinc   2570240 Dec 17 09:29 result.tar.gz
09:29:26 (6219): run_atlas exited; CPU time 56965.860586
09:29:26 (6219): called boinc_finish(0)

</stderr_txt>
]]>

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