Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:47:58 (31856): wrapper (7.7.26015): starting
16:47:58 (31856): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 16:47:58] Arguments: --nthreads 8
[2025-12-16 16:47:58] Threads: 8
[2025-12-16 16:47:58] Checking for CVMFS
[2025-12-16 16:47:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 16:47:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 16:47:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 16:47:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 16:47:59] 2.11.2.0 3733 147059 150164 154088 1 118 13449193 18432000 1807 130560 0 109348897 99.978 5986742 32306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 16:47:59] CVMFS is ok
[2025-12-16 16:47:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 16:47:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 16:47:59] Further information can be found at the LHC@home message board.
[2025-12-16 16:47:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 16:47:59] Checking for apptainer binary...
[2025-12-16 16:47:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 16:47:59] Running /usr/bin/apptainer --version
[2025-12-16 16:47:59] apptainer version 1.3.2-1.el7
[2025-12-16 16:47:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 16:48:00] c-206-23.aglt2.org
[2025-12-16 16:48:00] apptainer works
[2025-12-16 16:48:00] Set ATHENA_PROC_NUMBER=8
[2025-12-16 16:48:00] Set ATHENA_CORE_NUMBER=8
[2025-12-16 16:48:00] Starting ATLAS job with PandaID=6931014056
[2025-12-16 16:48:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 20:23:37]  *** The last 200 lines of the pilot log: ***
[2025-12-16 20:23:37] 2025-12-17 01:22:58,105 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-16 20:23:37] 2025-12-17 01:22:58,601 | INFO     | monitor loop #924: job 0:6931014056 is in state 'finished'
[2025-12-16 20:23:37] 2025-12-17 01:22:58,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:23:37] 2025-12-17 01:22:58,820 | INFO     | time since job start (12888s) is within the limit (174528.0s)
[2025-12-16 20:23:37] 2025-12-17 01:23:00,826 | INFO     | time since job start (12890s) is within the limit (174528.0s)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,104 | INFO     | monitor loop #925: job 0:6931014056 is in state 'finished'
[2025-12-16 20:23:37] 2025-12-17 01:23:01,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,210 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-16 20:23:37] 2025-12-17 01:23:01,214 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2056.375
[2025-12-16 20:23:37] 2025-12-17 01:23:01,217 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6931014056/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,217 | INFO     | extracted standard info from prmon json
[2025-12-16 20:23:37] 2025-12-17 01:23:01,217 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 20:23:37] 2025-12-17 01:23:01,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 20:23:37] 2025-12-17 01:23:01,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 20:23:37] 2025-12-17 01:23:01,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 20:23:37] 2025-12-17 01:23:01,221 | INFO     | fitting pss+swap vs Time
[2025-12-16 20:23:37] 2025-12-17 01:23:01,221 | INFO     | sum of square deviations: 2912836010.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,223 | INFO     | sum of deviations: 6872474170.999997
[2025-12-16 20:23:37] 2025-12-17 01:23:01,223 | INFO     | mean x: 1765928120.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,223 | INFO     | mean y: 2488102.407582938
[2025-12-16 20:23:37] 2025-12-17 01:23:01,223 | INFO     | intersect: -4163999592.360577
[2025-12-16 20:23:37] 2025-12-17 01:23:01,223 | INFO     | chi2: 1.5217863865043781
[2025-12-16 20:23:37] 2025-12-17 01:23:01,224 | INFO     | sum of square deviations: 2710627567.5
[2025-12-16 20:23:37] 2025-12-17 01:23:01,225 | INFO     | sum of deviations: 6674323967.000001
[2025-12-16 20:23:37] 2025-12-17 01:23:01,225 | INFO     | mean x: 1765927967.5
[2025-12-16 20:23:37] 2025-12-17 01:23:01,225 | INFO     | mean y: 2487953.203883495
[2025-12-16 20:23:37] 2025-12-17 01:23:01,225 | INFO     | intersect: -4345721110.555979
[2025-12-16 20:23:37] 2025-12-17 01:23:01,225 | INFO     | chi2: 1.5222191443174748
[2025-12-16 20:23:37] 2025-12-17 01:23:01,226 | INFO     | current chi2=1.5222191443174748 (change=-0.02843748747751476 %)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,226 | INFO     | right removable region: 205
[2025-12-16 20:23:37] 2025-12-17 01:23:01,226 | INFO     | sum of square deviations: 2710627567.5
[2025-12-16 20:23:37] 2025-12-17 01:23:01,227 | INFO     | sum of deviations: -22789798951.500004
[2025-12-16 20:23:37] 2025-12-17 01:23:01,227 | INFO     | mean x: 1765928272.5
[2025-12-16 20:23:37] 2025-12-17 01:23:01,227 | INFO     | mean y: 2510214.985436893
[2025-12-16 20:23:37] 2025-12-17 01:23:01,227 | INFO     | intersect: 14849680949.754671
[2025-12-16 20:23:37] 2025-12-17 01:23:01,228 | INFO     | chi2: 0.17024257314801516
[2025-12-16 20:23:37] 2025-12-17 01:23:01,228 | INFO     | current chi2=0.17024257314801516 (change=88.81297830906011 %)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,228 | INFO     | sum of square deviations: 2518000700.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,229 | INFO     | sum of deviations: -22388219999.999996
[2025-12-16 20:23:37] 2025-12-17 01:23:01,229 | INFO     | mean x: 1765928425.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,229 | INFO     | mean y: 2509855.3631840795
[2025-12-16 20:23:37] 2025-12-17 01:23:01,230 | INFO     | intersect: 15703853418.593126
[2025-12-16 20:23:37] 2025-12-17 01:23:01,230 | INFO     | chi2: 0.1539966437957708
[2025-12-16 20:23:37] 2025-12-17 01:23:01,230 | INFO     | current chi2=0.1539966437957708 (change=9.542812383433347 %)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,230 | INFO     | left removable region: 20
[2025-12-16 20:23:37] 2025-12-17 01:23:01,230 | INFO     | sum of square deviations: 1963274020.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,231 | INFO     | sum of deviations: -8350860349.9999895
[2025-12-16 20:23:37] 2025-12-17 01:23:01,231 | INFO     | mean x: 1765928547.0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,232 | INFO     | mean y: 2498096.4918918917
[2025-12-16 20:23:37] 2025-12-17 01:23:01,232 | INFO     | intersect: 7513942007.961466
[2025-12-16 20:23:37] 2025-12-17 01:23:01,232 | INFO     | chi2: 0.09785095492982877
[2025-12-16 20:23:37] 2025-12-17 01:23:01,232 | INFO     | current memory leak: -4.25 B/s (using 185 data points, chi2=0.10)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,232 | INFO     | could have reported an average CPU frequency of 2510 MHz (11 samples)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | ..............................
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . Timing measurements:
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . get job = 0 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . initial setup = 2 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . payload setup = 4 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . stage-in = 0 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . payload execution = 12857 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . stage-out = 4 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,233 | INFO     | . log creation = 0 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,234 | INFO     | ..............................
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | 
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | job summary report
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | --------------------------------------------------
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | PanDA job id: 6931014056
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | task id: 47886831
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | errors: (none)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | pilot state: finished 
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | transexitcode: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | exeerrorcode: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | exeerrordiag: 
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | exitcode: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | exitmsg: OK
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | cpuconsumptiontime: 96696 s
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | nevents: 400
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | neventsw: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:01,316 | INFO     | pid: 9995
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | pgrp: 9995
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | corecount: 8
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | event service: False
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | sizes: {0: 2283816, 1: 2284015, 4: 2284277, 12: 2284305, 12865: 2314315, 12871: 2323691, 12875: 2323659}
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | --------------------------------------------------
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | 
[2025-12-16 20:23:37] 2025-12-17 01:23:01,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-16 20:23:37] 2025-12-17 01:23:01,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 20:23:37] 2025-12-17 01:23:01,335 | INFO     | job 6931014056 has completed (purged errors)
[2025-12-16 20:23:37] 2025-12-17 01:23:01,335 | INFO     | overall cleanup function is called
[2025-12-16 20:23:37] 2025-12-17 01:23:01,959 | INFO     | PID=3302 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 20:23:37] 2025-12-17 01:23:01,959 | INFO     | .. there are 3 such processes running
[2025-12-16 20:23:37] 2025-12-17 01:23:02,342 | INFO     | --- collectZombieJob: --- 10, [9995]
[2025-12-16 20:23:37] 2025-12-17 01:23:02,342 | INFO     | zombie collector waiting for pid 9995
[2025-12-16 20:23:37] 2025-12-17 01:23:02,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 20:23:37] 2025-12-17 01:23:02,342 | INFO     | collected zombie processes
[2025-12-16 20:23:37] 2025-12-17 01:23:02,343 | INFO     | will attempt to kill all subprocesses of pid=9995
[2025-12-16 20:23:37] 2025-12-17 01:23:02,447 | INFO     | process IDs to be killed: [9995] (in reverse order)
[2025-12-16 20:23:37] 2025-12-17 01:23:02,503 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 20:23:37] 2025-12-17 01:23:02,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 20:23:37] 2025-12-17 01:23:02,506 | INFO     | did not find any defunct processes belonging to 9995
[2025-12-16 20:23:37] 2025-12-17 01:23:02,508 | INFO     | did not find any defunct processes belonging to 9995
[2025-12-16 20:23:37] 2025-12-17 01:23:02,509 | INFO     | ready for new job
[2025-12-16 20:23:37] 2025-12-17 01:23:02,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 20:23:37] 2025-12-17 01:23:02,510 | INFO     | ***************************************
[2025-12-16 20:23:37] 2025-12-17 01:23:02,510 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 20:23:37] 2025-12-17 01:23:02,510 | INFO     | ***************************************
[2025-12-16 20:23:37] 2025-12-17 01:23:02,511 | INFO     | 
[2025-12-16 20:23:37] 2025-12-17 01:23:02,511 | INFO     | architecture information:
[2025-12-16 20:23:37] 2025-12-17 01:23:02,512 | INFO     | executing command: cat /etc/os-release
[2025-12-16 20:23:37] 2025-12-17 01:23:02,523 | INFO     | cat /etc/os-release:
[2025-12-16 20:23:37] NAME="CentOS Linux"
[2025-12-16 20:23:37] VERSION="7 (Core)"
[2025-12-16 20:23:37] ID="centos"
[2025-12-16 20:23:37] ID_LIKE="rhel fedora"
[2025-12-16 20:23:37] VERSION_ID="7"
[2025-12-16 20:23:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 20:23:37] ANSI_COLOR="0;31"
[2025-12-16 20:23:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 20:23:37] HOME_URL="https://www.centos.org/"
[2025-12-16 20:23:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 20:23:37] 
[2025-12-16 20:23:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 20:23:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 20:23:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 20:23:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 20:23:37] 
[2025-12-16 20:23:37] 2025-12-17 01:23:02,523 | INFO     | ***************************************
[2025-12-16 20:23:37] 2025-12-17 01:23:03,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-16 20:23:37] 2025-12-17 01:23:03,040 | INFO     | sufficient remaining disk space (27865907200 B)
[2025-12-16 20:23:37] 2025-12-17 01:23:03,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 20:23:37] 2025-12-17 01:23:03,040 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 20:23:37] 2025-12-17 01:23:03,040 | INFO     | update_server=False
[2025-12-16 20:23:37] 2025-12-17 01:23:03,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 20:23:37] 2025-12-17 01:23:03,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:23:37] 2025-12-17 01:23:03,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 20:23:37] 2025-12-17 01:23:03,041 | INFO     | aborting loop
[2025-12-16 20:23:37] 2025-12-17 01:23:03,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:23:37] 2025-12-17 01:23:03,241 | INFO     | all job control threads have been joined
[2025-12-16 20:23:37] 2025-12-17 01:23:04,003 | INFO     | all payload control threads have been joined
[2025-12-16 20:23:37] 2025-12-17 01:23:04,046 | INFO     | [job] retrieve thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,047 | INFO     | [job] job monitor thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,048 | INFO     | [job] queue monitor thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,146 | INFO     | all data control threads have been joined
[2025-12-16 20:23:37] 2025-12-17 01:23:04,256 | INFO     | [job] control thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,299 | INFO     | [job] validate thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,507 | INFO     | [payload] failed_post thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 20:23:37] 2025-12-17 01:23:04,611 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:04,810 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:05,009 | INFO     | [payload] control thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:05,068 | INFO     | [payload] validate_post thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:05,102 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:05,150 | INFO     | [data] control thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:05,470 | INFO     | [data] copytool_in thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:06,525 | INFO     | [data] copytool_out thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:07,043 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 20:23:37] 2025-12-17 01:23:31,657 | INFO     | [monitor] cgroup control has ended
[2025-12-16 20:23:37] 2025-12-17 01:23:32,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139964462577472)>', '<ExcThread(monitor, started 139964008339200)>']
[2025-12-16 20:23:37] 2025-12-17 01:23:34,173 | INFO     | PID=3302 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 20:23:37] 2025-12-17 01:23:34,173 | INFO     | .. there are 3 such processes running
[2025-12-16 20:23:37] 2025-12-17 01:23:34,173 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 20:23:37] 2025-12-17 01:23:34,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 20:23:37] 2025-12-17 01:23:34,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 20:23:37] 2025-12-17 01:23:34,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 20:23:37] 2025-12-17 01:23:34,174 | INFO     | [monitor] control thread has ended
[2025-12-16 20:23:37] 2025-12-17 01:23:37,067 | INFO     | all workflow threads have been joined
[2025-12-16 20:23:37] 2025-12-17 01:23:37,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 20:23:37] 2025-12-17 01:23:37,068 | INFO     | traces error code: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:37,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 20:23:37] 2025-12-17 01:23:37,139 [wrapper] ==== pilot stdout END ====
[2025-12-16 20:23:37] 2025-12-17 01:23:37,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 20:23:37] 2025-12-17 01:23:37,143 [wrapper] pilotpid: 3302
[2025-12-16 20:23:37] 2025-12-17 01:23:37,145 [wrapper] Pilot exit status: 0
[2025-12-16 20:23:37] 2025-12-17 01:23:37,154 [wrapper] pandaids: 6931014056
[2025-12-16 20:23:37] 2025-12-17 01:23:37,180 [wrapper] cleanup supervisor_pilot 18487 3303
[2025-12-16 20:23:37] 2025-12-17 01:23:37,183 [wrapper] Test setup, not cleaning
[2025-12-16 20:23:37] 2025-12-17 01:23:37,185 [wrapper] apfmon messages muted
[2025-12-16 20:23:37] 2025-12-17 01:23:37,187 [wrapper] ==== wrapper stdout END ====
[2025-12-16 20:23:37] 2025-12-17 01:23:37,189 [wrapper] ==== wrapper stderr END ====
[2025-12-16 20:23:37]  *** Error codes and diagnostics ***
[2025-12-16 20:23:37]     "exeErrorCode": 0,
[2025-12-16 20:23:37]     "exeErrorDiag": "",
[2025-12-16 20:23:37]     "pilotErrorCode": 0,
[2025-12-16 20:23:37]     "pilotErrorDiag": "",
[2025-12-16 20:23:37]  *** Listing of results directory ***
[2025-12-16 20:23:37] total 346156
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 07:06 pilot3.tar.gz
[2025-12-16 20:23:37] -rwx------ 1 boincer umatlas     36322 Dec 16 07:07 runpilot2-wrapper.sh
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 07:07 queuedata.json
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas       100 Dec 16 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 20:23:37] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 16:47 run_atlas
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas       105 Dec 16 16:47 job.xml
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas 190715297 Dec 16 16:47 EVNT.47886829._000564.pool.root.1
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas    592411 Dec 16 16:47 input.tar.gz
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 16:47 start_atlas.sh
[2025-12-16 20:23:37] drwxrwx--x 2 boincer umatlas      4096 Dec 16 16:47 shared
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas         0 Dec 16 16:47 boinc_lockfile
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas      2536 Dec 16 16:48 pandaJob.out
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas        57 Dec 16 16:48 setup.sh.local
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas    987401 Dec 16 16:48 agis_schedconf.cvmfs.json
[2025-12-16 20:23:37] drwx------ 5 boincer umatlas      4096 Dec 16 16:48 pilot3
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas      5951 Dec 16 20:20 init_data.xml
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas 155384828 Dec 16 20:22 HITS.47886831._013703.pool.root.1
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas      1051 Dec 16 20:22 memory_monitor_summary.json
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas       530 Dec 16 20:22 boinc_task_state.xml
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas        95 Dec 16 20:22 pilot_heartbeat.json
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas   1516240 Dec 16 20:22 agis_ddmendpoints.agis.ALL.json
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas    429083 Dec 16 20:22 log.47886831._013703.job.log.tgz.1
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas      7846 Dec 16 20:23 heartbeat.json
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas        28 Dec 16 20:23 wrapper_checkpoint.txt
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 20:23 boinc_mmap_file
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas      4820 Dec 16 20:23 pilotlog.txt
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas   1794446 Dec 16 20:23 log.47886831._013703.job.log.1
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas       357 Dec 16 20:23 output.list
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas       620 Dec 16 20:23 runtime_log
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas   2242560 Dec 16 20:23 result.tar.gz
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas      9343 Dec 16 20:23 runtime_log.err
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas       662 Dec 16 20:23 leNNDmY1ip8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQwZKDmQJa3Lm.diag
[2025-12-16 20:23:37] -rw-r--r-- 1 boincer umatlas     21461 Dec 16 20:23 stderr.txt
[2025-12-16 20:23:37] HITS file was successfully produced:
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas 155384828 Dec 16 20:22 shared/HITS.pool.root.1
[2025-12-16 20:23:37]  *** Contents of shared directory: ***
[2025-12-16 20:23:37] total 340784
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas 190715297 Dec 16 16:47 ATLAS.root_0
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas    592411 Dec 16 16:47 input.tar.gz
[2025-12-16 20:23:37] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 16:47 start_atlas.sh
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas 155384828 Dec 16 20:22 HITS.pool.root.1
[2025-12-16 20:23:37] -rw------- 1 boincer umatlas   2242560 Dec 16 20:23 result.tar.gz
20:23:38 (31856): run_atlas exited; CPU time 96877.253963
20:23:38 (31856): called boinc_finish(0)

</stderr_txt>
]]>

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