Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:15:58 (929009): wrapper (7.7.26015): starting
09:15:58 (929009): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 09:15:58] Arguments: --nthreads 3
[2025-12-17 09:15:58] Threads: 3
[2025-12-17 09:15:58] Checking for CVMFS
[2025-12-17 09:15:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 09:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 09:15:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 09:15:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 09:15:58] 2.9.2.0 3658277 5753 83032 154105 3 9 19879017 36864001 0 130560 0 3835220 99.989 209570 15379 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 09:15:58] CVMFS is ok
[2025-12-17 09:15:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 09:15:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 09:15:58] Further information can be found at the LHC@home message board.
[2025-12-17 09:15:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 09:15:58] Checking for apptainer binary...
[2025-12-17 09:15:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 09:15:58] Running /usr/bin/apptainer --version
[2025-12-17 09:15:58] apptainer version 1.4.1-1.1
[2025-12-17 09:15:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 09:15:58] thA305b
[2025-12-17 09:15:58] apptainer works
[2025-12-17 09:15:58] Set ATHENA_PROC_NUMBER=3
[2025-12-17 09:15:58] Set ATHENA_CORE_NUMBER=3
[2025-12-17 09:15:58] Starting ATLAS job with PandaID=6931012368
[2025-12-17 09:15:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 10:43:17]  *** The last 200 lines of the pilot log: ***
[2025-12-17 10:43:17] 2025-12-17 09:42:32,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:43:17] 2025-12-17 09:42:32,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 10:43:17] 2025-12-17 09:42:32,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 10:43:17] 2025-12-17 09:42:32,042 | INFO     | aborting loop
[2025-12-17 10:43:17] 2025-12-17 09:42:32,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 10:43:17] 2025-12-17 09:42:32,906 | INFO     | all data control threads have been joined
[2025-12-17 10:43:17] 2025-12-17 09:42:33,026 | INFO     | all payload control threads have been joined
[2025-12-17 10:43:17] 2025-12-17 09:42:33,047 | INFO     | [job] retrieve thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,047 | INFO     | [job] queue monitor thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,047 | INFO     | [job] job monitor thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,063 | INFO     | all job control threads have been joined
[2025-12-17 10:43:17] 2025-12-17 09:42:33,087 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,087 | INFO     | [payload] failed_post thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,597 | INFO     | [payload] validate_post thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,912 | INFO     | [data] control thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:33,982 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,032 | INFO     | [payload] control thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,068 | INFO     | [job] control thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,197 | INFO     | [data] copytool_in thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,291 | INFO     | [data] copytool_out thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,450 | INFO     | [job] validate thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:34,511 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:36,049 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:42:42,984 | INFO     | job.realtimelogging is not enabled
[2025-12-17 10:43:17] 2025-12-17 09:42:43,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 10:43:17] 2025-12-17 09:43:01,794 | INFO     | 5187s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-17 10:43:17] 2025-12-17 09:43:02,856 | INFO     | PID=932742 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 10:43:17] 2025-12-17 09:43:02,857 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 10:43:17] 2025-12-17 09:43:02,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 10:43:17] 2025-12-17 09:43:02,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 10:43:17] 2025-12-17 09:43:10,793 | INFO     | [monitor] cgroup control has ended
[2025-12-17 10:43:17] 2025-12-17 09:43:12,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715132868416)>', '<ExcThread(monitor, started 139714170431232)>']
[2025-12-17 10:43:17] 2025-12-17 09:43:12,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 10:43:17] 2025-12-17 09:43:12,909 | INFO     | [monitor] control thread has ended
[2025-12-17 10:43:17] 2025-12-17 09:43:17,130 | INFO     | all workflow threads have been joined
[2025-12-17 10:43:17] 2025-12-17 09:43:17,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 10:43:17] 2025-12-17 09:43:17,130 | INFO     | traces error code: 0
[2025-12-17 10:43:17] 2025-12-17 09:43:17,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 10:43:17] 2025-12-17 09:43:17,179 [wrapper] ==== pilot stdout END ====
[2025-12-17 10:43:17] 2025-12-17 09:43:17,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 10:43:17] 2025-12-17 09:43:17,184 [wrapper] pilotpid: 932742
[2025-12-17 10:43:17] 2025-12-17 09:43:17,186 [wrapper] Pilot exit status: 0
[2025-12-17 10:43:17] 2025-12-17 09:43:17,194 [wrapper] pandaids: 6931012368
[2025-12-17 10:43:17] 2025-12-17 09:43:17,212 [wrapper] cleanup supervisor_pilot  951054 932743
[2025-12-17 10:43:17] 2025-12-17 09:43:17,215 [wrapper] Test setup, not cleaning
[2025-12-17 10:43:17] 2025-12-17 09:43:17,217 [wrapper] apfmon messages muted
[2025-12-17 10:43:17] 2025-12-17 09:43:17,219 [wrapper] ==== wrapper stdout END ====
[2025-12-17 10:43:17] 2025-12-17 09:43:17,222 [wrapper] ==== wrapper stderr END ====
[2025-12-17 10:43:17]  *** Error codes and diagnostics ***
[2025-12-17 10:43:17]     "exeErrorCode": 0,
[2025-12-17 10:43:17]     "exeErrorDiag": "",
[2025-12-17 10:43:17]     "pilotErrorCode": 0,
[2025-12-17 10:43:17]     "pilotErrorDiag": "",
[2025-12-17 10:43:17]  *** Listing of results directory ***
[2025-12-17 10:43:17] total 335788
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc    579449 Dec 16 10:01 pilot3.tar.gz
[2025-12-17 10:43:17] -rwx------ 1 boinc boinc     36322 Dec 16 10:04 runpilot2-wrapper.sh
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      5112 Dec 16 10:06 queuedata.json
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc       100 Dec 17 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 10:43:17] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 09:15 run_atlas
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc       105 Dec 17 09:15 job.xml
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc 190887472 Dec 17 09:15 EVNT.47886929._000251.pool.root.1
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc    592400 Dec 17 09:15 input.tar.gz
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc     15847 Dec 17 09:15 start_atlas.sh
[2025-12-17 10:43:17] drwxrwx--x 2 boinc boinc      4096 Dec 17 09:15 shared
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc         0 Dec 17 09:15 boinc_setup_complete
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      6447 Dec 17 09:15 init_data.xml
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc         0 Dec 17 09:15 boinc_lockfile
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      2514 Dec 17 09:15 pandaJob.out
[2025-12-17 10:43:17] -rw------- 1 boinc boinc    987417 Dec 17 09:16 agis_schedconf.cvmfs.json
[2025-12-17 10:43:17] -rw------- 1 boinc boinc   1516240 Dec 17 09:16 agis_ddmendpoints.agis.ALL.json
[2025-12-17 10:43:17] drwx------ 5 boinc boinc      4096 Dec 17 09:16 pilot3
[2025-12-17 10:43:17] -rw------- 1 boinc boinc 147032929 Dec 17 10:42 HITS.47886933._006492.pool.root.1
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc       529 Dec 17 10:42 boinc_task_state.xml
[2025-12-17 10:43:17] -rw------- 1 boinc boinc      1017 Dec 17 10:42 memory_monitor_summary.json
[2025-12-17 10:43:17] -rw------- 1 boinc boinc    257703 Dec 17 10:42 log.47886933._006492.job.log.tgz.1
[2025-12-17 10:43:17] -rw------- 1 boinc boinc      7749 Dec 17 10:42 heartbeat.json
[2025-12-17 10:43:17] -rw------- 1 boinc boinc        95 Dec 17 10:42 pilot_heartbeat.json
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      8192 Dec 17 10:42 boinc_mmap_file
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc        27 Dec 17 10:42 wrapper_checkpoint.txt
[2025-12-17 10:43:17] -rw------- 1 boinc boinc      4938 Dec 17 10:43 pilotlog.txt
[2025-12-17 10:43:17] -rw------- 1 boinc boinc    757022 Dec 17 10:43 log.47886933._006492.job.log.1
[2025-12-17 10:43:17] -rw------- 1 boinc boinc       357 Dec 17 10:43 output.list
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc       620 Dec 17 10:43 runtime_log
[2025-12-17 10:43:17] -rw------- 1 boinc boinc   1034240 Dec 17 10:43 result.tar.gz
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      8902 Dec 17 10:43 runtime_log.err
[2025-12-17 10:43:17] -rw------- 1 boinc boinc       659 Dec 17 10:43 A5UMDmr9fp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1sZKDmSVGA5n.diag
[2025-12-17 10:43:17] -rw-r--r-- 1 boinc boinc      7423 Dec 17 10:43 stderr.txt
[2025-12-17 10:43:17] HITS file was successfully produced:
[2025-12-17 10:43:17] -rw------- 1 boinc boinc 147032929 Dec 17 10:42 shared/HITS.pool.root.1
[2025-12-17 10:43:17]  *** Contents of shared directory: ***
[2025-12-17 10:43:17] total 331620
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc 190887472 Dec 17 09:15 ATLAS.root_0
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc    592400 Dec 17 09:15 input.tar.gz
[2025-12-17 10:43:17] -rw-r--r-- 2 boinc boinc     15847 Dec 17 09:15 start_atlas.sh
[2025-12-17 10:43:17] -rw------- 1 boinc boinc 147032929 Dec 17 10:42 HITS.pool.root.1
[2025-12-17 10:43:17] -rw------- 1 boinc boinc   1034240 Dec 17 10:43 result.tar.gz
10:43:19 (929009): run_atlas exited; CPU time 14904.444707
10:43:19 (929009): called boinc_finish(0)

</stderr_txt>
]]>

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