Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:39 (1677381): wrapper (7.7.26015): starting
17:48:39 (1677381): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 17:48:39] Arguments: --nthreads 3
[2025-12-17 17:48:39] Threads: 3
[2025-12-17 17:48:39] Checking for CVMFS
[2025-12-17 17:48:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 17:48:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 17:48:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 17:48:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 17:48:39] 2.9.2.0 21575 6414 82164 154112 1 188 14352536 36864000 0 130560 0 4362600 99.990 223275 15899 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 17:48:39] CVMFS is ok
[2025-12-17 17:48:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 17:48:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 17:48:39] Further information can be found at the LHC@home message board.
[2025-12-17 17:48:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 17:48:39] Checking for apptainer binary...
[2025-12-17 17:48:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 17:48:39] Running /usr/bin/apptainer --version
[2025-12-17 17:48:39] apptainer version 1.4.1-1.1
[2025-12-17 17:48:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 17:48:40] cosA121b
[2025-12-17 17:48:40] apptainer works
[2025-12-17 17:48:40] Set ATHENA_PROC_NUMBER=3
[2025-12-17 17:48:40] Set ATHENA_CORE_NUMBER=3
[2025-12-17 17:48:40] Starting ATLAS job with PandaID=6931013488
[2025-12-17 17:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 19:15:56]  *** The last 200 lines of the pilot log: ***
[2025-12-17 19:15:56]  scope=mc23_13p6TeV
[2025-12-17 19:15:56]  status=None
[2025-12-17 19:15:56]  status_code=0
[2025-12-17 19:15:56]  storage_token=
[2025-12-17 19:15:56]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6931013488/log.47886933._006732.job.log.tgz.1
[2025-12-17 19:15:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/eb/log.47886933._006732.job.log.tgz.1
[2025-12-17 19:15:56]  workdir=None
[2025-12-17 19:15:56] ]
[2025-12-17 19:15:56] 2025-12-17 18:14:55,156 | INFO     | transferring file log.47886933._006732.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6931013488/log.47886933._006732.job.log.tgz.1 to /local/data/boinc/
[2025-12-17 19:15:56] 2025-12-17 18:14:55,156 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6931013488/log.47886933._006732.job.log.tgz.1 /local/data/boinc/slots/0/log.47886933._0067
[2025-12-17 19:15:56] 2025-12-17 18:14:55,168 | INFO     | adding to output.list: log.47886933._006732.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/eb/log.47886933._006732.job.log.tg
[2025-12-17 19:15:56] 2025-12-17 18:14:55,168 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-17 19:15:56] 2025-12-17 18:14:55,168 | INFO     | summary of transferred files:
[2025-12-17 19:15:56] 2025-12-17 18:14:55,168 | INFO     |  -- lfn=log.47886933._006732.job.log.tgz.1, status_code=0, status=transferred
[2025-12-17 19:15:56] 2025-12-17 18:14:55,168 | INFO     | stage-out finished correctly
[2025-12-17 19:15:56] 2025-12-17 18:14:55,911 | INFO     | time since job start (5169s) is within the limit (174528.0s)
[2025-12-17 19:15:56] 2025-12-17 18:14:56,078 | WARNING  | process 1687557 can no longer be monitored (due to stat problems) - aborting
[2025-12-17 19:15:56] 2025-12-17 18:14:56,078 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6931013488/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:15:56] 2025-12-17 18:14:56,120 | INFO     | number of running child processes to parent process 1687557: 1
[2025-12-17 19:15:56] 2025-12-17 18:14:56,120 | INFO     | maximum number of monitored processes: 6
[2025-12-17 19:15:56] 2025-12-17 18:14:57,244 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-17 19:15:56] 2025-12-17 18:14:57,917 | INFO     | time since job start (5171s) is within the limit (174528.0s)
[2025-12-17 19:15:56] 2025-12-17 18:14:58,568 | INFO     | job 6931013488 has state=finished
[2025-12-17 19:15:56] 2025-12-17 18:14:58,568 | INFO     | preparing for final server update for job 6931013488 in state='finished'
[2025-12-17 19:15:56] 2025-12-17 18:14:58,568 | INFO     | this job has now completed (state=finished)
[2025-12-17 19:15:56] 2025-12-17 18:14:58,569 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-17 19:15:56] 2025-12-17 18:14:58,569 | INFO     | log transfer has been attempted: DONE
[2025-12-17 19:15:56] 2025-12-17 18:14:58,569 | INFO     | job 6931013488 has finished - writing final server update
[2025-12-17 19:15:56] 2025-12-17 18:14:58,569 | INFO     | total number of processed events: 400 (read)
[2025-12-17 19:15:56] 2025-12-17 18:14:58,570 | INFO     | executing command: lscpu
[2025-12-17 19:15:56] 2025-12-17 18:14:58,585 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-17 19:15:56] 2025-12-17 18:14:58,624 | INFO     | monitor loop #397: job 0:6931013488 is in state 'finished'
[2025-12-17 19:15:56] 2025-12-17 18:14:58,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:15:56] 2025-12-17 18:14:59,922 | INFO     | time since job start (5173s) is within the limit (174528.0s)
[2025-12-17 19:15:56] 2025-12-17 18:15:00,995 | INFO     | PID=1681103 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 19:15:56] 2025-12-17 18:15:01,127 | INFO     | monitor loop #398: job 0:6931013488 is in state 'finished'
[2025-12-17 19:15:56] 2025-12-17 18:15:01,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-17 19:15:56] 2025-12-17 18:15:01,995 | INFO     | time since job start (5175s) is within the limit (174528.0s)
[2025-12-17 19:15:56] 2025-12-17 18:15:02,996 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-17 19:15:56] 2025-12-17 18:15:02,997 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3692.624916666667
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6931013488/memory_monitor_summary.json (trf name=prmon)
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | INFO     | extracted standard info from prmon json
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | INFO     | extracted standard memory fields from prmon json
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-17 19:15:56] 2025-12-17 18:15:02,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | fitting pss+swap vs Time
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | sum of square deviations: 147126479.5
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | sum of deviations: -13583777344.500002
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | mean x: 1765992798.5
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | mean y: 2439474.8076923075
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | intersect: 163051627142.0383
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | chi2: 0.1275011800306428
[2025-12-17 19:15:56] 2025-12-17 18:15:02,999 | INFO     | current memory leak: -92.33 B/s (using 78 data points, chi2=0.13)
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | could have reported an average CPU frequency of 3811 MHz (6 samples)
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | ..............................
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . Timing measurements:
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . get job = 0 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . initial setup = 1 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . payload setup = 2 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . stage-in = 0 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . payload execution = 5148 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . stage-out = 0 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | . log creation = 0 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,000 | INFO     | ..............................
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | 
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | job summary report
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | --------------------------------------------------
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | PanDA job id: 6931013488
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | task id: 47886933
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | errors: (none)
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | pilot state: finished 
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | transexitcode: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | exeerrorcode: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | exeerrordiag: 
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | exitcode: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | exitmsg: OK
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | cpuconsumptiontime: 14813 s
[2025-12-17 19:15:56] 2025-12-17 18:15:03,029 | INFO     | nevents: 400
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | neventsw: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | pid: 1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | pgrp: 1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | corecount: 3
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | event service: False
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | sizes: {0: 2283797, 1: 2283996, 3: 2284258, 11: 2284286, 5155: 2310899, 5156: 2310898, 5157: 2320086, 5159: 2320142, 5164: 2320336}
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | --------------------------------------------------
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | 
[2025-12-17 19:15:56] 2025-12-17 18:15:03,030 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | job 6931013488 has completed (purged errors)
[2025-12-17 19:15:56] 2025-12-17 18:15:03,041 | INFO     | overall cleanup function is called
[2025-12-17 19:15:56] 2025-12-17 18:15:04,048 | INFO     | --- collectZombieJob: --- 10, [1687557]
[2025-12-17 19:15:56] 2025-12-17 18:15:04,048 | INFO     | zombie collector waiting for pid 1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:04,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-17 19:15:56] 2025-12-17 18:15:04,048 | INFO     | collected zombie processes
[2025-12-17 19:15:56] 2025-12-17 18:15:04,048 | INFO     | will attempt to kill all subprocesses of pid=1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:04,095 | INFO     | process IDs to be killed: [1687557] (in reverse order)
[2025-12-17 19:15:56] 2025-12-17 18:15:04,120 | WARNING  | found no corresponding commands to process id(s)
[2025-12-17 19:15:56] 2025-12-17 18:15:04,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-17 19:15:56] 2025-12-17 18:15:04,122 | INFO     | did not find any defunct processes belonging to 1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:04,123 | INFO     | did not find any defunct processes belonging to 1687557
[2025-12-17 19:15:56] 2025-12-17 18:15:04,123 | INFO     | ready for new job
[2025-12-17 19:15:56] 2025-12-17 18:15:04,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | ***************************************
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | ***************************************
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | 
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | architecture information:
[2025-12-17 19:15:56] 2025-12-17 18:15:04,124 | INFO     | executing command: cat /etc/os-release
[2025-12-17 19:15:56] 2025-12-17 18:15:04,132 | INFO     | cat /etc/os-release:
[2025-12-17 19:15:56] NAME="CentOS Linux"
[2025-12-17 19:15:56] VERSION="7 (Core)"
[2025-12-17 19:15:56] ID="centos"
[2025-12-17 19:15:56] ID_LIKE="rhel fedora"
[2025-12-17 19:15:56] VERSION_ID="7"
[2025-12-17 19:15:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-17 19:15:56] ANSI_COLOR="0;31"
[2025-12-17 19:15:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-17 19:15:56] HOME_URL="https://www.centos.org/"
[2025-12-17 19:15:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-17 19:15:56] 
[2025-12-17 19:15:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-17 19:15:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-17 19:15:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-17 19:15:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-17 19:15:56] 
[2025-12-17 19:15:56] 2025-12-17 18:15:04,132 | INFO     | ***************************************
[2025-12-17 19:15:56] 2025-12-17 18:15:04,636 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-17 19:15:56] 2025-12-17 18:15:04,647 | INFO     | sufficient remaining disk space (345252036608 B)
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | INFO     | update_server=False
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 19:15:56] 2025-12-17 18:15:04,648 | INFO     | aborting loop
[2025-12-17 19:15:56] 2025-12-17 18:15:05,234 | INFO     | all job control threads have been joined
[2025-12-17 19:15:56] 2025-12-17 18:15:05,651 | INFO     | [job] queue monitor thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:05,652 | INFO     | [job] retrieve thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:05,654 | INFO     | [job] job monitor thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:05,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 19:15:56] 2025-12-17 18:15:05,735 | INFO     | all data control threads have been joined
[2025-12-17 19:15:56] 2025-12-17 18:15:05,807 | INFO     | [data] copytool_in thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:05,966 | INFO     | [payload] failed_post thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,120 | INFO     | all payload control threads have been joined
[2025-12-17 19:15:56] 2025-12-17 18:15:06,240 | INFO     | [job] control thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,334 | INFO     | [job] validate thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,441 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,442 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,465 | INFO     | [payload] validate_post thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,709 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:06,741 | INFO     | [data] control thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:07,124 | INFO     | [payload] control thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:07,713 | INFO     | [data] copytool_out thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:07,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 19:15:56] 2025-12-17 18:15:11,792 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:14,701 | INFO     | job.realtimelogging is not enabled
[2025-12-17 19:15:56] 2025-12-17 18:15:15,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 19:15:56] 2025-12-17 18:15:35,110 | INFO     | PID=1681103 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 19:15:56] 2025-12-17 18:15:35,110 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 19:15:56] 2025-12-17 18:15:35,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 19:15:56] 2025-12-17 18:15:35,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 19:15:56] 2025-12-17 18:15:51,675 | INFO     | [monitor] cgroup control has ended
[2025-12-17 19:15:56] 2025-12-17 18:15:51,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950119528256)>', '<ExcThread(monitor, started 139949479286528)>']
[2025-12-17 19:15:56] 2025-12-17 18:15:52,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 19:15:56] 2025-12-17 18:15:52,197 | INFO     | [monitor] control thread has ended
[2025-12-17 19:15:56] 2025-12-17 18:15:56,757 | INFO     | all workflow threads have been joined
[2025-12-17 19:15:56] 2025-12-17 18:15:56,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 19:15:56] 2025-12-17 18:15:56,757 | INFO     | traces error code: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:56,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 19:15:56] 2025-12-17 18:15:56,807 [wrapper] ==== pilot stdout END ====
[2025-12-17 19:15:56] 2025-12-17 18:15:56,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 19:15:56] 2025-12-17 18:15:56,812 [wrapper] pilotpid: 1681103
[2025-12-17 19:15:56] 2025-12-17 18:15:56,814 [wrapper] Pilot exit status: 0
[2025-12-17 19:15:56] 2025-12-17 18:15:56,821 [wrapper] pandaids: 6931013488
[2025-12-17 19:15:56] 2025-12-17 18:15:56,838 [wrapper] cleanup supervisor_pilot 1699446 1681104
[2025-12-17 19:15:56] 2025-12-17 18:15:56,841 [wrapper] Test setup, not cleaning
[2025-12-17 19:15:56] 2025-12-17 18:15:56,843 [wrapper] apfmon messages muted
[2025-12-17 19:15:56] 2025-12-17 18:15:56,845 [wrapper] ==== wrapper stdout END ====
[2025-12-17 19:15:56] 2025-12-17 18:15:56,847 [wrapper] ==== wrapper stderr END ====
[2025-12-17 19:15:56]  *** Error codes and diagnostics ***
[2025-12-17 19:15:56]     "exeErrorCode": 0,
[2025-12-17 19:15:56]     "exeErrorDiag": "",
[2025-12-17 19:15:56]     "pilotErrorCode": 0,
[2025-12-17 19:15:56]     "pilotErrorDiag": "",
[2025-12-17 19:15:56]  *** Listing of results directory ***
[2025-12-17 19:15:56] total 339464
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc    579449 Dec 16 10:01 pilot3.tar.gz
[2025-12-17 19:15:56] -rwx------ 1 boinc boinc     36322 Dec 16 10:02 runpilot2-wrapper.sh
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc      5112 Dec 16 10:03 queuedata.json
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc       100 Dec 17 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 19:15:56] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 17:48 run_atlas
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc       105 Dec 17 17:48 job.xml
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc 193899948 Dec 17 17:48 EVNT.47886929._000261.pool.root.1
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc    592398 Dec 17 17:48 input.tar.gz
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc     15847 Dec 17 17:48 start_atlas.sh
[2025-12-17 19:15:56] drwxrwx--x 2 boinc boinc      4096 Dec 17 17:48 shared
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc         0 Dec 17 17:48 boinc_setup_complete
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc      6440 Dec 17 17:48 init_data.xml
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc         0 Dec 17 17:48 boinc_lockfile
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc      2513 Dec 17 17:48 pandaJob.out
[2025-12-17 19:15:56] -rw------- 1 boinc boinc    987423 Dec 17 17:48 agis_schedconf.cvmfs.json
[2025-12-17 19:15:56] -rw------- 1 boinc boinc   1516240 Dec 17 17:48 agis_ddmendpoints.agis.ALL.json
[2025-12-17 19:15:56] drwx------ 5 boinc boinc      4096 Dec 17 17:48 pilot3
[2025-12-17 19:15:56] -rw------- 1 boinc boinc 147787503 Dec 17 19:14 HITS.47886933._006732.pool.root.1
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc       529 Dec 17 19:14 boinc_task_state.xml
[2025-12-17 19:15:56] -rw------- 1 boinc boinc      1015 Dec 17 19:14 memory_monitor_summary.json
[2025-12-17 19:15:56] -rw------- 1 boinc boinc    248843 Dec 17 19:14 log.47886933._006732.job.log.tgz.1
[2025-12-17 19:15:56] -rw------- 1 boinc boinc      7753 Dec 17 19:15 heartbeat.json
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc        27 Dec 17 19:15 wrapper_checkpoint.txt
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc      8192 Dec 17 19:15 boinc_mmap_file
[2025-12-17 19:15:56] -rw------- 1 boinc boinc        95 Dec 17 19:15 pilot_heartbeat.json
[2025-12-17 19:15:56] -rw------- 1 boinc boinc      4824 Dec 17 19:15 pilotlog.txt
[2025-12-17 19:15:56] -rw------- 1 boinc boinc    758495 Dec 17 19:15 log.47886933._006732.job.log.1
[2025-12-17 19:15:56] -rw------- 1 boinc boinc       357 Dec 17 19:15 output.list
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc       620 Dec 17 19:15 runtime_log
[2025-12-17 19:15:56] -rw------- 1 boinc boinc   1024000 Dec 17 19:15 result.tar.gz
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc      8907 Dec 17 19:15 runtime_log.err
[2025-12-17 19:15:56] -rw------- 1 boinc boinc       661 Dec 17 19:15 onOODmc7fp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLPVKDmqq5AHo.diag
[2025-12-17 19:15:56] -rw-r--r-- 1 boinc boinc     22127 Dec 17 19:15 stderr.txt
[2025-12-17 19:15:56] HITS file was successfully produced:
[2025-12-17 19:15:56] -rw------- 1 boinc boinc 147787503 Dec 17 19:14 shared/HITS.pool.root.1
[2025-12-17 19:15:56]  *** Contents of shared directory: ***
[2025-12-17 19:15:56] total 335284
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc 193899948 Dec 17 17:48 ATLAS.root_0
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc    592398 Dec 17 17:48 input.tar.gz
[2025-12-17 19:15:56] -rw-r--r-- 2 boinc boinc     15847 Dec 17 17:48 start_atlas.sh
[2025-12-17 19:15:56] -rw------- 1 boinc boinc 147787503 Dec 17 19:14 HITS.pool.root.1
[2025-12-17 19:15:56] -rw------- 1 boinc boinc   1024000 Dec 17 19:15 result.tar.gz
19:15:58 (1677381): run_atlas exited; CPU time 14835.945837
19:15:58 (1677381): called boinc_finish(0)

</stderr_txt>
]]>

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