Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:47:20 (643895): wrapper (7.7.26015): starting
11:47:20 (643895): wrapper: running run_atlas (--nthreads 12)
[2025-12-16 11:47:20] Arguments: --nthreads 12
[2025-12-16 11:47:20] Threads: 12
[2025-12-16 11:47:20] Checking for CVMFS
[2025-12-16 11:47:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 11:47:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 11:47:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 11:47:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 11:47:22] 2.11.5.0 3810059 22415 330368 154084 2 24 27167767 45568001 16315 130560 0 104076930 99.832 60601053 19132 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-16 11:47:22] CVMFS is ok
[2025-12-16 11:47:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 11:47:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 11:47:22] Further information can be found at the LHC@home message board.
[2025-12-16 11:47:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 11:47:22] Checking for apptainer binary...
[2025-12-16 11:47:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 11:47:22] Running /usr/bin/apptainer --version
[2025-12-16 11:47:23] apptainer version 1.4.1-1.el9
[2025-12-16 11:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 11:47:23] wns0043.triumf.lcg
[2025-12-16 11:47:23] apptainer works
[2025-12-16 11:47:23] Set ATHENA_PROC_NUMBER=12
[2025-12-16 11:47:23] Set ATHENA_CORE_NUMBER=12
[2025-12-16 11:47:23] Starting ATLAS job with PandaID=6931443313
[2025-12-16 11:47:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 11:55:36]  *** The last 200 lines of the pilot log: ***
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 11:55:36] 2025-12-16 19:54:45,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | WARNING  | wrong length of table data, x=[1765914666.0, 1765914727.0], y=[2258.0, 470128.0] (must be same and length>=4)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | INFO     | could have reported an average CPU frequency of 1397 MHz (4 samples)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . Timing measurements:
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . get job = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . initial setup = 6 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload setup = 38 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-in = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload execution = 107 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-out = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . log creation = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931443313/pilotlog.txt
[2025-12-16 11:55:36] 2025-12-16 19:54:45,636 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-16 11:55:36] - Log from pilotlog.txt -
[2025-12-16 11:55:36] 2025-12-16 19:54:45,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931443313/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | INFO     | extracted standard info from prmon json
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 11:55:36] 2025-12-16 19:54:45,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | WARNING  | wrong length of table data, x=[1765914666.0, 1765914727.0], y=[2258.0, 470128.0] (must be same and length>=4)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | INFO     | could have reported an average CPU frequency of 1397 MHz (4 samples)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . Timing measurements:
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . get job = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . initial setup = 6 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload setup = 38 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-in = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload execution = 107 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-out = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . log creation = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931443313/pilotlog.txt
[2025-12-16 11:55:36] 2025-12-16 19:54:45,637 | WARNING  | 
[2025-12-16 11:55:36] [begin log extracts]
[2025-12-16 11:55:36] - Log from pilotlog.txt -
[2025-12-16 11:55:36] 2025-12-16 19:54:45,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6931443313/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | INFO     | extracted standard info from prmon json
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 11:55:36] 2025-12-16 19:54:45,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 11:55:36] 2025-12-16 19:54:45,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | WARNING  | wrong length of table data, x=[1765914666.0, 1765914727.0], y=[2258.0, 470128.0] (must be same and length>=4)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,536 | INFO     | could have reported an average CPU frequency of 1397 MHz (4 samples)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . Timing measurements:
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . get job = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . initial setup = 6 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload setup = 38 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-in = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . payload execution = 107 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . stage-out = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | . log creation = 0 s
[2025-12-16 11:55:36] 2025-12-16 19:54:45,537 | INFO     | ..............................
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-16 11:55:36] 2025-12-16 19:54:45,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6931443313/pilotlog.txt
[2025-12-16 11:55:36] [end log extracts]
[2025-12-16 11:55:36] 2025-12-16 19:54:45,637 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-16 11:55:36] 2025-12-16 19:54:45,638 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-16 11:55:36] 2025-12-16 19:54:46,713 | INFO     | 
[2025-12-16 11:55:36] 2025-12-16 19:54:46,713 | INFO     | job summary report
[2025-12-16 11:55:36] 2025-12-16 19:54:46,713 | INFO     | --------------------------------------------------
[2025-12-16 11:55:36] 2025-12-16 19:54:46,713 | INFO     | PanDA job id: 6931443313
[2025-12-16 11:55:36] 2025-12-16 19:54:46,713 | INFO     | task id: 47898763
[2025-12-16 11:55:36] 2025-12-16 19:54:46,714 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-16 11:52:04,171 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-16 11:55:36] 2025-12-16 19:54:46,714 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 11:55:36] 2025-12-16 19:54:46,714 | INFO     | pilot state: failed 
[2025-12-16 11:55:36] 2025-12-16 19:54:46,714 | INFO     | transexitcode: 65
[2025-12-16 11:55:36] 2025-12-16 19:54:46,714 | INFO     | exeerrorcode: 65
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | exitcode: 65
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | cpuconsumptiontime: 31 s
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | nevents: 0
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | neventsw: 0
[2025-12-16 11:55:36] 2025-12-16 19:54:46,736 | INFO     | pid: 654956
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | pgrp: 654956
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | corecount: 12
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | event service: False
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | sizes: {0: 2283130, 1: 2283812, 2: 2283840, 3: 2284011, 4: 2284039, 5: 2284067, 16: 2284251, 27: 2284481, 28: 2284569, 38: 2284597, 151: 2307908, 152: 2308164, 153
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | --------------------------------------------------
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | 
[2025-12-16 11:55:36] 2025-12-16 19:54:46,737 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-16 11:55:36] 2025-12-16 19:54:46,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 11:55:36] 2025-12-16 19:54:46,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 11:55:36] 2025-12-16 19:54:46,892 | INFO     | job 6931443313 has completed (purged errors)
[2025-12-16 11:55:36] 2025-12-16 19:54:46,892 | INFO     | overall cleanup function is called
[2025-12-16 11:55:36] 2025-12-16 19:54:47,917 | INFO     | --- collectZombieJob: --- 10, [654956]
[2025-12-16 11:55:36] 2025-12-16 19:54:47,917 | INFO     | zombie collector waiting for pid 654956
[2025-12-16 11:55:36] 2025-12-16 19:54:47,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 11:55:36] 2025-12-16 19:54:47,917 | INFO     | collected zombie processes
[2025-12-16 11:55:36] 2025-12-16 19:54:47,917 | INFO     | will attempt to kill all subprocesses of pid=654956
[2025-12-16 11:55:36] 2025-12-16 19:54:50,222 | INFO     | process IDs to be killed: [654956] (in reverse order)
[2025-12-16 11:55:36] 2025-12-16 19:54:50,583 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 11:55:36] 2025-12-16 19:54:50,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 11:55:36] 2025-12-16 19:54:50,738 | INFO     | did not find any defunct processes belonging to 654956
[2025-12-16 11:55:36] 2025-12-16 19:54:50,864 | INFO     | did not find any defunct processes belonging to 654956
[2025-12-16 11:55:36] 2025-12-16 19:54:50,865 | INFO     | ready for new job
[2025-12-16 11:55:36] 2025-12-16 19:54:50,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 11:55:36] 2025-12-16 19:54:50,897 | INFO     | ***************************************
[2025-12-16 11:55:36] 2025-12-16 19:54:50,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 11:55:36] 2025-12-16 19:54:50,897 | INFO     | ***************************************
[2025-12-16 11:55:36] 2025-12-16 19:54:50,897 | INFO     | 
[2025-12-16 11:55:36] 2025-12-16 19:54:50,935 | INFO     | architecture information:
[2025-12-16 11:55:36] 2025-12-16 19:54:50,951 | INFO     | executing command: cat /etc/os-release
[2025-12-16 11:55:36] 2025-12-16 19:54:51,115 | INFO     | cat /etc/os-release:
[2025-12-16 11:55:36] NAME="CentOS Linux"
[2025-12-16 11:55:36] VERSION="7 (Core)"
[2025-12-16 11:55:36] ID="centos"
[2025-12-16 11:55:36] ID_LIKE="rhel fedora"
[2025-12-16 11:55:36] VERSION_ID="7"
[2025-12-16 11:55:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 11:55:36] ANSI_COLOR="0;31"
[2025-12-16 11:55:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 11:55:36] HOME_URL="https://www.centos.org/"
[2025-12-16 11:55:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 11:55:36] 
[2025-12-16 11:55:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 11:55:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 11:55:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 11:55:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 11:55:36] 
[2025-12-16 11:55:36] 2025-12-16 19:54:51,116 | INFO     | ***************************************
[2025-12-16 11:55:36] 2025-12-16 19:54:51,620 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-16 11:55:36] 2025-12-16 19:54:51,777 | INFO     | sufficient remaining disk space (2024726855680 B)
[2025-12-16 11:55:36] 2025-12-16 19:54:51,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 11:55:36] 2025-12-16 19:54:51,777 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 11:55:36] 2025-12-16 19:54:51,778 | INFO     | update_server=False
[2025-12-16 11:55:36] 2025-12-16 19:54:51,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 11:55:36] 2025-12-16 19:54:51,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 11:55:36] 2025-12-16 19:54:51,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:55:36] 2025-12-16 19:54:51,942 | INFO     | all data control threads have been joined
[2025-12-16 11:55:36] 2025-12-16 19:54:52,207 | INFO     | all payload control threads have been joined
[2025-12-16 11:55:36] 2025-12-16 19:54:52,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 11:55:36] 2025-12-16 19:54:52,329 | INFO     | aborting loop
[2025-12-16 11:55:36] 2025-12-16 19:54:52,784 | INFO     | [job] retrieve thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:52,799 | INFO     | [job] queue monitor thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:52,948 | INFO     | [data] control thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:52,957 | INFO     | all job control threads have been joined
[2025-12-16 11:55:36] 2025-12-16 19:54:53,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 11:55:36] 2025-12-16 19:54:53,124 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,215 | INFO     | [payload] control thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,330 | INFO     | [job] validate thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,335 | INFO     | [job] job monitor thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,339 | INFO     | [payload] failed_post thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,654 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,777 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,800 | INFO     | [data] copytool_out thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:53,963 | INFO     | [job] control thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:54,010 | INFO     | [payload] validate_post thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:54,079 | INFO     | [data] copytool_in thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:54,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:54:57,125 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 11:55:36] 2025-12-16 19:55:19,774 | INFO     | PID=647807 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-16 11:55:36] 2025-12-16 19:55:19,774 | INFO     | .. there are 35 such processes running
[2025-12-16 11:55:36] 2025-12-16 19:55:19,775 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 11:55:36] 2025-12-16 19:55:19,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 11:55:36] 2025-12-16 19:55:19,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 11:55:36] 2025-12-16 19:55:29,133 | INFO     | [monitor] cgroup control has ended
[2025-12-16 11:55:36] 2025-12-16 19:55:30,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571012503360)>', '<ExcThread(monitor, started 140570613753600)>']
[2025-12-16 11:55:36] 2025-12-16 19:55:31,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 11:55:36] 2025-12-16 19:55:31,861 | INFO     | [monitor] control thread has ended
[2025-12-16 11:55:36] 2025-12-16 19:55:35,983 | INFO     | all workflow threads have been joined
[2025-12-16 11:55:36] 2025-12-16 19:55:35,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 11:55:36] 2025-12-16 19:55:35,984 | INFO     | traces error code: 0
[2025-12-16 11:55:36] 2025-12-16 19:55:35,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 11:55:36] 2025-12-16 19:55:36,143 [wrapper] ==== pilot stdout END ====
[2025-12-16 11:55:36] 2025-12-16 19:55:36,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 11:55:36] 2025-12-16 19:55:36,150 [wrapper] pilotpid: 647807
[2025-12-16 11:55:36] 2025-12-16 19:55:36,153 [wrapper] Pilot exit status: 0
[2025-12-16 11:55:36] 2025-12-16 19:55:36,260 [wrapper] pandaids: 6931443313
[2025-12-16 11:55:36] 2025-12-16 19:55:36,375 [wrapper] cleanup supervisor_pilot  647813 647808
[2025-12-16 11:55:36] 2025-12-16 19:55:36,395 [wrapper] Test setup, not cleaning
[2025-12-16 11:55:36] 2025-12-16 19:55:36,469 [wrapper] apfmon messages muted
[2025-12-16 11:55:36] 2025-12-16 19:55:36,593 [wrapper] ==== wrapper stdout END ====
[2025-12-16 11:55:36] 2025-12-16 19:55:36,627 [wrapper] ==== wrapper stderr END ====
[2025-12-16 11:55:36]  *** Error codes and diagnostics ***
[2025-12-16 11:55:36]     "exeErrorCode": 65,
[2025-12-16 11:55:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 11:55:36]     "pilotErrorCode": 1305,
[2025-12-16 11:55:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-16 11:55:36]  *** Listing of results directory ***
[2025-12-16 11:55:36] total 222828
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      5112 Dec 16 07:02 queuedata.json
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc    579449 Dec 16 07:02 pilot3.tar.gz
[2025-12-16 11:55:36] -rwx------. 1 boinc boinc     36322 Dec 16 07:02 runpilot2-wrapper.sh
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc       100 Dec 16 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 11:55:36] -rwxr-xr-x. 1 boinc boinc      7986 Dec 16 11:47 run_atlas
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc       105 Dec 16 11:47 job.xml
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc 224034571 Dec 16 11:47 EVNT.47898761._000779.pool.root.1
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      6596 Dec 16 11:47 init_data.xml
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc     15847 Dec 16 11:47 start_atlas.sh
[2025-12-16 11:55:36] drwxrwx--x. 2 boinc boinc      4096 Dec 16 11:47 shared
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc    592394 Dec 16 11:47 input.tar.gz
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc         0 Dec 16 11:47 boinc_lockfile
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      2508 Dec 16 11:47 pandaJob.out
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc    987409 Dec 16 11:48 agis_schedconf.cvmfs.json
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc   1516240 Dec 16 11:48 agis_ddmendpoints.agis.ALL.json
[2025-12-16 11:55:36] drwx------. 5 boinc boinc      4096 Dec 16 11:48 pilot3
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc       524 Dec 16 11:52 boinc_task_state.xml
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc       994 Dec 16 11:52 memory_monitor_summary.json
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc     22772 Dec 16 11:52 log.47898763._020048.job.log.tgz.1
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc        95 Dec 16 11:54 pilot_heartbeat.json
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc      8421 Dec 16 11:54 heartbeat.json
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc      4822 Dec 16 11:55 pilotlog.txt
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      8192 Dec 16 11:55 boinc_mmap_file
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc        23 Dec 16 11:55 wrapper_checkpoint.txt
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc    102299 Dec 16 11:55 log.47898763._020048.job.log.1
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc       188 Dec 16 11:55 output.list
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc       620 Dec 16 11:55 runtime_log
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc    143360 Dec 16 11:55 result.tar.gz
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      8636 Dec 16 11:55 runtime_log.err
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc       647 Dec 16 11:55 DXyKDmOklp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7hVKDmZlicom.diag
[2025-12-16 11:55:36] -rw-r--r--. 1 boinc boinc      6145 Dec 16 11:55 stderr.txt
[2025-12-16 11:55:36] No HITS result produced
[2025-12-16 11:55:36]  *** Contents of shared directory: ***
[2025-12-16 11:55:36] total 219524
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc 224034571 Dec 16 11:47 ATLAS.root_0
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc     15847 Dec 16 11:47 start_atlas.sh
[2025-12-16 11:55:36] -rw-r--r--. 2 boinc boinc    592394 Dec 16 11:47 input.tar.gz
[2025-12-16 11:55:36] -rw-------. 1 boinc boinc    143360 Dec 16 11:55 result.tar.gz
11:55:38 (643895): run_atlas exited; CPU time 49.020452
11:55:38 (643895): called boinc_finish(0)

</stderr_txt>
]]>

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