Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:30:42 (32060): wrapper (7.7.26015): starting
14:30:42 (32060): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 14:30:42] Arguments: --nthreads 8
[2025-12-16 14:30:42] Threads: 8
[2025-12-16 14:30:42] Checking for CVMFS
[2025-12-16 14:30:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 14:30:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 14:30:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 14:30:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 14:30:42] 2.11.2.0 2929 21809 86544 154083 0 56 14180279 20275200 1 130560 0 6611388 99.895 1226694 28404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-16 14:30:42] CVMFS is ok
[2025-12-16 14:30:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 14:30:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 14:30:42] Further information can be found at the LHC@home message board.
[2025-12-16 14:30:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 14:30:42] Checking for apptainer binary...
[2025-12-16 14:30:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 14:30:42] Running /usr/bin/apptainer --version
[2025-12-16 14:30:42] apptainer version 1.3.2-1.el7
[2025-12-16 14:30:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 14:30:44] c-115-9.aglt2.org
[2025-12-16 14:30:44] apptainer works
[2025-12-16 14:30:44] Set ATHENA_PROC_NUMBER=8
[2025-12-16 14:30:44] Set ATHENA_CORE_NUMBER=8
[2025-12-16 14:30:44] Starting ATLAS job with PandaID=6931443306
[2025-12-16 14:30:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 17:04:23]  *** The last 200 lines of the pilot log: ***
[2025-12-16 17:04:23] 2025-12-16 22:03:20,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 17:04:23] 2025-12-16 22:03:20,980 | INFO     | fitting pss+swap vs Time
[2025-12-16 17:04:23] 2025-12-16 22:03:20,981 | INFO     | sum of square deviations: 1046484737.5
[2025-12-16 17:04:23] 2025-12-16 22:03:20,982 | INFO     | sum of deviations: 11039180796.999996
[2025-12-16 17:04:23] 2025-12-16 22:03:20,982 | INFO     | mean x: 1765918036.5
[2025-12-16 17:04:23] 2025-12-16 22:03:20,982 | INFO     | mean y: 2480725.1733333333
[2025-12-16 17:04:23] 2025-12-16 22:03:20,982 | INFO     | intersect: -18625873591.94516
[2025-12-16 17:04:23] 2025-12-16 22:03:20,982 | INFO     | chi2: 2.039004252437527
[2025-12-16 17:04:23] 2025-12-16 22:03:20,983 | INFO     | sum of square deviations: 945282840.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,983 | INFO     | sum of deviations: 20308451840.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,983 | INFO     | mean x: 1765917884.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,984 | INFO     | mean y: 2494287.5931034484
[2025-12-16 17:04:23] 2025-12-16 22:03:20,984 | INFO     | intersect: -37936476762.18149
[2025-12-16 17:04:23] 2025-12-16 22:03:20,984 | INFO     | chi2: 1.271115659849043
[2025-12-16 17:04:23] 2025-12-16 22:03:20,984 | INFO     | current chi2=1.271115659849043 (change=37.659979947099764 %)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,984 | INFO     | sum of square deviations: 850825255.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,985 | INFO     | sum of deviations: 19434895850.000004
[2025-12-16 17:04:23] 2025-12-16 22:03:20,986 | INFO     | mean x: 1765917731.5
[2025-12-16 17:04:23] 2025-12-16 22:03:20,986 | INFO     | mean y: 2492876.685714286
[2025-12-16 17:04:23] 2025-12-16 22:03:20,986 | INFO     | intersect: -40335316784.794975
[2025-12-16 17:04:23] 2025-12-16 22:03:20,986 | INFO     | chi2: 1.2723331993839413
[2025-12-16 17:04:23] 2025-12-16 22:03:20,987 | INFO     | current chi2=1.2723331993839413 (change=-0.09578511014827179 %)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,987 | INFO     | sufficient remaining disk space (18539872256 B)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,987 | INFO     | right removable region: 139
[2025-12-16 17:04:23] 2025-12-16 22:03:20,987 | INFO     | sum of square deviations: 945282840.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,988 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,988 | INFO     | sum of deviations: -7934116280.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,989 | INFO     | mean x: 1765918189.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,989 | INFO     | mean y: 2508796.627586207
[2025-12-16 17:04:23] 2025-12-16 22:03:20,989 | INFO     | intersect: 14824527836.44536
[2025-12-16 17:04:23] 2025-12-16 22:03:20,990 | INFO     | chi2: 0.8160298502914566
[2025-12-16 17:04:23] 2025-12-16 22:03:20,990 | INFO     | current chi2=0.8160298502914566 (change=59.97900203906226 %)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,990 | INFO     | sum of square deviations: 850825255.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,991 | INFO     | sum of deviations: -5532634791.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,991 | INFO     | mean x: 1765918341.5
[2025-12-16 17:04:23] 2025-12-16 22:03:20,991 | INFO     | mean y: 2504993.9
[2025-12-16 17:04:23] 2025-12-16 22:03:20,992 | INFO     | intersect: 11485686994.94194
[2025-12-16 17:04:23] 2025-12-16 22:03:20,992 | INFO     | chi2: 0.7944727637870094
[2025-12-16 17:04:23] 2025-12-16 22:03:20,992 | INFO     | current chi2=0.7944727637870094 (change=2.641703179944679 %)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,992 | INFO     | left removable region: 20
[2025-12-16 17:04:23] 2025-12-16 22:03:20,992 | INFO     | sum of square deviations: 522502820.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,993 | INFO     | sum of deviations: 1929431463.9999995
[2025-12-16 17:04:23] 2025-12-16 22:03:20,993 | INFO     | mean x: 1765918311.0
[2025-12-16 17:04:23] 2025-12-16 22:03:20,994 | INFO     | mean y: 2522778.3781512603
[2025-12-16 17:04:23] 2025-12-16 22:03:20,994 | INFO     | intersect: -6518434088.605144
[2025-12-16 17:04:23] 2025-12-16 22:03:20,994 | INFO     | chi2: 0.0002724781971757632
[2025-12-16 17:04:23] 2025-12-16 22:03:20,994 | INFO     | current memory leak: 3.69 B/s (using 119 data points, chi2=0.00)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,995 | INFO     | could have reported an average CPU frequency of 2151 MHz (8 samples)
[2025-12-16 17:04:23] 2025-12-16 22:03:20,995 | INFO     | ..............................
[2025-12-16 17:04:23] 2025-12-16 22:03:20,995 | INFO     | . Timing measurements:
[2025-12-16 17:04:23] 2025-12-16 22:03:20,995 | INFO     | . get job = 0 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . initial setup = 2 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . payload setup = 8 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . stage-in = 0 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . payload execution = 9099 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . stage-out = 0 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,996 | INFO     | . log creation = 0 s
[2025-12-16 17:04:23] 2025-12-16 22:03:20,997 | INFO     | ..............................
[2025-12-16 17:04:23] 2025-12-16 22:03:21,083 | INFO     | 
[2025-12-16 17:04:23] 2025-12-16 22:03:21,084 | INFO     | job summary report
[2025-12-16 17:04:23] 2025-12-16 22:03:21,084 | INFO     | --------------------------------------------------
[2025-12-16 17:04:23] 2025-12-16 22:03:21,084 | INFO     | PanDA job id: 6931443306
[2025-12-16 17:04:23] 2025-12-16 22:03:21,085 | INFO     | task id: 47898763
[2025-12-16 17:04:23] 2025-12-16 22:03:21,085 | INFO     | errors: (none)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 17:04:23] 2025-12-16 22:03:21,085 | INFO     | pilot state: finished 
[2025-12-16 17:04:23] 2025-12-16 22:03:21,085 | INFO     | transexitcode: 0
[2025-12-16 17:04:23] 2025-12-16 22:03:21,086 | INFO     | exeerrorcode: 0
[2025-12-16 17:04:23] 2025-12-16 22:03:21,086 | INFO     | exeerrordiag: 
[2025-12-16 17:04:23] 2025-12-16 22:03:21,086 | INFO     | exitcode: 0
[2025-12-16 17:04:23] 2025-12-16 22:03:21,086 | INFO     | exitmsg: OK
[2025-12-16 17:04:23] 2025-12-16 22:03:21,086 | INFO     | cpuconsumptiontime: 68750 s
[2025-12-16 17:04:23] 2025-12-16 22:03:21,087 | INFO     | nevents: 400
[2025-12-16 17:04:23] 2025-12-16 22:03:21,087 | INFO     | neventsw: 0
[2025-12-16 17:04:23] 2025-12-16 22:03:21,087 | INFO     | pid: 9975
[2025-12-16 17:04:23] 2025-12-16 22:03:21,087 | INFO     | pgrp: 9975
[2025-12-16 17:04:23] 2025-12-16 22:03:21,087 | INFO     | corecount: 8
[2025-12-16 17:04:23] 2025-12-16 22:03:21,088 | INFO     | event service: False
[2025-12-16 17:04:23] 2025-12-16 22:03:21,088 | INFO     | sizes: {0: 2283787, 1: 2283986, 7: 2284248, 12: 2284276, 9112: 2312502, 9113: 2321500, 9115: 2321684, 9122: 2321878}
[2025-12-16 17:04:23] 2025-12-16 22:03:21,088 | INFO     | --------------------------------------------------
[2025-12-16 17:04:23] 2025-12-16 22:03:21,088 | INFO     | 
[2025-12-16 17:04:23] 2025-12-16 22:03:21,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-16 17:04:23] 2025-12-16 22:03:21,089 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6931443306: 3985953 B (within 2768240640 B limit)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,093 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6931443306/HITS.47898763._020041.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,093 | INFO     | total size of present files: 0 B (workdir size: 3985953 B)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,094 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6931443306/HITS.47898763._020041.pool.root.1 since it does not exist
[2025-12-16 17:04:23] 2025-12-16 22:03:21,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,115 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 17:04:23] 2025-12-16 22:03:21,116 | INFO     | job 6931443306 has completed (purged errors)
[2025-12-16 17:04:23] 2025-12-16 22:03:21,116 | INFO     | overall cleanup function is called
[2025-12-16 17:04:23] 2025-12-16 22:03:21,187 | INFO     | number of running child processes to parent process 9975: 1
[2025-12-16 17:04:23] 2025-12-16 22:03:21,187 | INFO     | maximum number of monitored processes: 6
[2025-12-16 17:04:23] 2025-12-16 22:03:21,187 | INFO     | aborting job monitoring since job object (job id=6931443306) has expired
[2025-12-16 17:04:23] 2025-12-16 22:03:22,124 | INFO     | --- collectZombieJob: --- 10, [9975]
[2025-12-16 17:04:23] 2025-12-16 22:03:22,125 | INFO     | zombie collector waiting for pid 9975
[2025-12-16 17:04:23] 2025-12-16 22:03:22,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 17:04:23] 2025-12-16 22:03:22,125 | INFO     | collected zombie processes
[2025-12-16 17:04:23] 2025-12-16 22:03:22,125 | INFO     | will attempt to kill all subprocesses of pid=9975
[2025-12-16 17:04:23] 2025-12-16 22:03:22,205 | INFO     | process IDs to be killed: [9975] (in reverse order)
[2025-12-16 17:04:23] 2025-12-16 22:03:22,260 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 17:04:23] 2025-12-16 22:03:22,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 17:04:23] 2025-12-16 22:03:22,265 | INFO     | did not find any defunct processes belonging to 9975
[2025-12-16 17:04:23] 2025-12-16 22:03:22,269 | INFO     | did not find any defunct processes belonging to 9975
[2025-12-16 17:04:23] 2025-12-16 22:03:22,269 | INFO     | ready for new job
[2025-12-16 17:04:23] 2025-12-16 22:03:22,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 17:04:23] 2025-12-16 22:03:22,271 | INFO     | ***************************************
[2025-12-16 17:04:23] 2025-12-16 22:03:22,272 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 17:04:23] 2025-12-16 22:03:22,272 | INFO     | ***************************************
[2025-12-16 17:04:23] 2025-12-16 22:03:22,272 | INFO     | 
[2025-12-16 17:04:23] 2025-12-16 22:03:22,272 | INFO     | architecture information:
[2025-12-16 17:04:23] 2025-12-16 22:03:22,273 | INFO     | executing command: cat /etc/os-release
[2025-12-16 17:04:23] 2025-12-16 22:03:22,291 | INFO     | cat /etc/os-release:
[2025-12-16 17:04:23] NAME="CentOS Linux"
[2025-12-16 17:04:23] VERSION="7 (Core)"
[2025-12-16 17:04:23] ID="centos"
[2025-12-16 17:04:23] ID_LIKE="rhel fedora"
[2025-12-16 17:04:23] VERSION_ID="7"
[2025-12-16 17:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 17:04:23] ANSI_COLOR="0;31"
[2025-12-16 17:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 17:04:23] HOME_URL="https://www.centos.org/"
[2025-12-16 17:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 17:04:23] 
[2025-12-16 17:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 17:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 17:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 17:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 17:04:23] 
[2025-12-16 17:04:23] 2025-12-16 22:03:22,292 | INFO     | ***************************************
[2025-12-16 17:04:23] 2025-12-16 22:03:22,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-16 17:04:23] 2025-12-16 22:03:22,818 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-12-16 17:04:23] 2025-12-16 22:03:22,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 17:04:23] 2025-12-16 22:03:22,818 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 17:04:23] 2025-12-16 22:03:22,819 | INFO     | update_server=False
[2025-12-16 17:04:23] 2025-12-16 22:03:22,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 17:04:23] 2025-12-16 22:03:22,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:04:23] 2025-12-16 22:03:22,820 | INFO     | aborting loop
[2025-12-16 17:04:23] 2025-12-16 22:03:22,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 17:04:23] 2025-12-16 22:03:22,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 17:04:23] 2025-12-16 22:03:23,303 | INFO     | all job control threads have been joined
[2025-12-16 17:04:23] 2025-12-16 22:03:23,401 | INFO     | all data control threads have been joined
[2025-12-16 17:04:23] 2025-12-16 22:03:23,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 17:04:23] 2025-12-16 22:03:23,822 | INFO     | [job] retrieve thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:23,825 | INFO     | [job] job monitor thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:23,826 | INFO     | [job] queue monitor thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:23,851 | INFO     | all payload control threads have been joined
[2025-12-16 17:04:23] 2025-12-16 22:03:24,142 | INFO     | [payload] validate_post thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,309 | INFO     | [job] control thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,394 | INFO     | [payload] failed_post thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,406 | INFO     | [data] control thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,681 | INFO     | [job] validate thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,759 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,823 | INFO     | [data] copytool_out thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,854 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,857 | INFO     | [payload] control thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,869 | INFO     | [data] copytool_in thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:24,965 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:27,678 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:33,345 | INFO     | job.realtimelogging is not enabled
[2025-12-16 17:04:23] 2025-12-16 22:03:34,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 17:04:23] 2025-12-16 22:03:53,397 | INFO     | PID=3492 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-16 17:04:23] 2025-12-16 22:03:53,397 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 17:04:23] 2025-12-16 22:03:53,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 17:04:23] 2025-12-16 22:03:53,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 17:04:23] 2025-12-16 22:04:16,162 | INFO     | [monitor] cgroup control has ended
[2025-12-16 17:04:23] 2025-12-16 22:04:17,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420284827456)>', '<ExcThread(monitor, started 140419677525760)>']
[2025-12-16 17:04:23] 2025-12-16 22:04:18,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 17:04:23] 2025-12-16 22:04:18,525 | INFO     | [monitor] control thread has ended
[2025-12-16 17:04:23] 2025-12-16 22:04:22,975 | INFO     | all workflow threads have been joined
[2025-12-16 17:04:23] 2025-12-16 22:04:22,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 17:04:23] 2025-12-16 22:04:22,976 | INFO     | traces error code: 0
[2025-12-16 17:04:23] 2025-12-16 22:04:22,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 17:04:23] 2025-12-16 22:04:23,095 [wrapper] ==== pilot stdout END ====
[2025-12-16 17:04:23] 2025-12-16 22:04:23,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 17:04:23] 2025-12-16 22:04:23,105 [wrapper] pilotpid: 3492
[2025-12-16 17:04:23] 2025-12-16 22:04:23,110 [wrapper] Pilot exit status: 0
[2025-12-16 17:04:23] 2025-12-16 22:04:23,129 [wrapper] pandaids: 6931443306
[2025-12-16 17:04:23] 2025-12-16 22:04:23,185 [wrapper] cleanup supervisor_pilot 14005 3493
[2025-12-16 17:04:23] 2025-12-16 22:04:23,190 [wrapper] Test setup, not cleaning
[2025-12-16 17:04:23] 2025-12-16 22:04:23,195 [wrapper] apfmon messages muted
[2025-12-16 17:04:23] 2025-12-16 22:04:23,200 [wrapper] ==== wrapper stdout END ====
[2025-12-16 17:04:23] 2025-12-16 22:04:23,205 [wrapper] ==== wrapper stderr END ====
[2025-12-16 17:04:23]  *** Error codes and diagnostics ***
[2025-12-16 17:04:23]     "exeErrorCode": 0,
[2025-12-16 17:04:23]     "exeErrorDiag": "",
[2025-12-16 17:04:23]     "pilotErrorCode": 0,
[2025-12-16 17:04:23]     "pilotErrorDiag": "",
[2025-12-16 17:04:23]  *** Listing of results directory ***
[2025-12-16 17:04:23] total 437116
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas      5112 Dec 16 10:02 queuedata.json
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas    579449 Dec 16 10:02 pilot3.tar.gz
[2025-12-16 17:04:23] -rwx------ 1 boincer umatlas     36322 Dec 16 10:02 runpilot2-wrapper.sh
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas       100 Dec 16 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 17:04:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec 16 14:30 run_atlas
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas       105 Dec 16 14:30 job.xml
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas 223841825 Dec 16 14:30 EVNT.47898761._000778.pool.root.1
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 14:30 start_atlas.sh
[2025-12-16 17:04:23] drwxrwx--x 2 boincer umatlas      4096 Dec 16 14:30 shared
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas    592396 Dec 16 14:30 input.tar.gz
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas         0 Dec 16 14:30 boinc_lockfile
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas      2508 Dec 16 14:30 pandaJob.out
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas        57 Dec 16 14:30 setup.sh.local
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas    987409 Dec 16 14:30 agis_schedconf.cvmfs.json
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas   1516240 Dec 16 14:31 agis_ddmendpoints.agis.ALL.json
[2025-12-16 17:04:23] drwx------ 5 boincer umatlas      4096 Dec 16 14:31 pilot3
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas 216494533 Dec 16 17:02 HITS.47898763._020041.pool.root.1
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas       530 Dec 16 17:02 boinc_task_state.xml
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas      5909 Dec 16 17:03 init_data.xml
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas        95 Dec 16 17:03 pilot_heartbeat.json
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas      1049 Dec 16 17:03 memory_monitor_summary.json
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas    400243 Dec 16 17:03 log.47898763._020041.job.log.tgz.1
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas      7838 Dec 16 17:03 heartbeat.json
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas      8192 Dec 16 17:04 boinc_mmap_file
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas        27 Dec 16 17:04 wrapper_checkpoint.txt
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas      4817 Dec 16 17:04 pilotlog.txt
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas   1276894 Dec 16 17:04 log.47898763._020041.job.log.1
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas       357 Dec 16 17:04 output.list
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas       620 Dec 16 17:04 runtime_log
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas   1699840 Dec 16 17:04 result.tar.gz
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas       659 Dec 16 17:04 S1iKDmOklp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1hVKDmx5qQAn.diag
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas      9337 Dec 16 17:04 runtime_log.err
[2025-12-16 17:04:23] -rw-r--r-- 1 boincer umatlas     21298 Dec 16 17:04 stderr.txt
[2025-12-16 17:04:23] HITS file was successfully produced:
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas 216494533 Dec 16 17:02 shared/HITS.pool.root.1
[2025-12-16 17:04:23]  *** Contents of shared directory: ***
[2025-12-16 17:04:23] total 432280
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas 223841825 Dec 16 14:30 ATLAS.root_0
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 16 14:30 start_atlas.sh
[2025-12-16 17:04:23] -rw-r--r-- 2 boincer umatlas    592396 Dec 16 14:30 input.tar.gz
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas 216494533 Dec 16 17:02 HITS.pool.root.1
[2025-12-16 17:04:23] -rw------- 1 boincer umatlas   1699840 Dec 16 17:04 result.tar.gz
17:04:24 (32060): run_atlas exited; CPU time 68772.527829
17:04:24 (32060): called boinc_finish(0)

</stderr_txt>
]]>

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