Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:44 (1042533): wrapper (7.7.26015): starting
14:46:44 (1042533): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 14:46:44] Arguments: --nthreads 8
[2025-12-16 14:46:44] Threads: 8
[2025-12-16 14:46:44] Checking for CVMFS
[2025-12-16 14:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 14:46:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 14:46:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 14:47:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 14:47:05] 2.13.3.0 11830 59154 371120 154084 1 210 32446102 32935937 24322 16776704 0 317119706 99.498 398032782 32223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 14:47:05] CVMFS is ok
[2025-12-16 14:47:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 14:47:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 14:47:05] Further information can be found at the LHC@home message board.
[2025-12-16 14:47:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 14:47:05] Checking for apptainer binary...
[2025-12-16 14:47:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 14:47:05] Running /usr/bin/apptainer --version
[2025-12-16 14:47:05] apptainer version 1.4.5-2.el9
[2025-12-16 14:47:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 14:47:06] c6-8-25-1.aglt2.org
[2025-12-16 14:47:06] apptainer works
[2025-12-16 14:47:06] Set ATHENA_PROC_NUMBER=8
[2025-12-16 14:47:06] Set ATHENA_CORE_NUMBER=8
[2025-12-16 14:47:06] Starting ATLAS job with PandaID=6931443264
[2025-12-16 14:47:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 23:40:13]  *** The last 200 lines of the pilot log: ***
[2025-12-16 23:40:13] 2025-12-17 04:39:18,995 | INFO     | monitor loop #1807: job 0:6931443264 is in state 'finished'
[2025-12-16 23:40:13] 2025-12-17 04:39:18,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:40:13] 2025-12-17 04:39:21,504 | INFO     | monitor loop #1808: job 0:6931443264 is in state 'finished'
[2025-12-16 23:40:13] 2025-12-17 04:39:21,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:40:13] 2025-12-17 04:39:22,665 | INFO     | PID=1047466 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 23:40:13] 2025-12-17 04:39:22,665 | INFO     | .. there are 24 such processes running
[2025-12-16 23:40:13] 2025-12-17 04:39:23,667 | INFO     | time since job start (31875s) is within the limit (174528.0s)
[2025-12-16 23:40:13] 2025-12-17 04:39:24,047 | INFO     | monitor loop #1809: job 0:6931443264 is in state 'finished'
[2025-12-16 23:40:13] 2025-12-17 04:39:24,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 23:40:13] 2025-12-17 04:39:24,375 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 23:40:13] 2025-12-17 04:39:24,406 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2546.3826145833323
[2025-12-16 23:40:13] 2025-12-17 04:39:24,521 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6931443264/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 23:40:13] 2025-12-17 04:39:24,522 | INFO     | extracted standard info from prmon json
[2025-12-16 23:40:13] 2025-12-17 04:39:24,537 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 23:40:13] 2025-12-17 04:39:24,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 23:40:13] 2025-12-17 04:39:24,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 23:40:13] 2025-12-17 04:39:24,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 23:40:13] 2025-12-17 04:39:24,647 | INFO     | fitting pss+swap vs Time
[2025-12-16 23:40:13] 2025-12-17 04:39:24,649 | INFO     | sum of square deviations: 43600644082.57713
[2025-12-16 23:40:13] 2025-12-17 04:39:24,755 | INFO     | sum of deviations: 46516835686.923065
[2025-12-16 23:40:13] 2025-12-17 04:39:24,756 | INFO     | mean x: 1765930447.6346154
[2025-12-16 23:40:13] 2025-12-17 04:39:24,756 | INFO     | mean y: 2515158.2153846156
[2025-12-16 23:40:13] 2025-12-17 04:39:24,756 | INFO     | intersect: -1881528029.5773237
[2025-12-16 23:40:13] 2025-12-17 04:39:24,757 | INFO     | chi2: 3.382254638250238
[2025-12-16 23:40:13] 2025-12-17 04:39:24,828 | INFO     | sum of square deviations: 42354960031.0214
[2025-12-16 23:40:13] 2025-12-17 04:39:24,886 | INFO     | sum of deviations: 78703399900.19421
[2025-12-16 23:40:13] 2025-12-17 04:39:24,886 | INFO     | mean x: 1765930295.1320388
[2025-12-16 23:40:13] 2025-12-17 04:39:24,904 | INFO     | mean y: 2519067.291262136
[2025-12-16 23:40:13] 2025-12-17 04:39:24,905 | INFO     | intersect: -3278908140.0972085
[2025-12-16 23:40:13] 2025-12-17 04:39:24,905 | INFO     | chi2: 2.698729412727256
[2025-12-16 23:40:13] 2025-12-17 04:39:24,906 | INFO     | current chi2=2.698729412727256 (change=20.209159233398054 %)
[2025-12-16 23:40:13] 2025-12-17 04:39:24,915 | INFO     | right removable region: 514
[2025-12-16 23:40:13] 2025-12-17 04:39:24,916 | INFO     | sum of square deviations: 42354980772.48565
[2025-12-16 23:40:13] 2025-12-17 04:39:24,947 | INFO     | sum of deviations: -76837195546.5534
[2025-12-16 23:40:13] 2025-12-17 04:39:24,967 | INFO     | mean x: 1765930600.1359224
[2025-12-16 23:40:13] 2025-12-17 04:39:24,968 | INFO     | mean y: 2530223.7650485435
[2025-12-16 23:40:13] 2025-12-17 04:39:24,968 | INFO     | intersect: 3206147658.3509645
[2025-12-16 23:40:13] 2025-12-17 04:39:24,969 | INFO     | chi2: 1.023686142117642
[2025-12-16 23:40:13] 2025-12-17 04:39:24,969 | INFO     | current chi2=1.023686142117642 (change=69.73361702159625 %)
[2025-12-16 23:40:13] 2025-12-17 04:39:24,970 | INFO     | sum of square deviations: 41133302814.16461
[2025-12-16 23:40:13] 2025-12-17 04:39:25,021 | INFO     | sum of deviations: -82793911284.65884
[2025-12-16 23:40:13] 2025-12-17 04:39:25,021 | INFO     | mean x: 1765930752.6352942
[2025-12-16 23:40:13] 2025-12-17 04:39:25,021 | INFO     | mean y: 2530956.9588235295
[2025-12-16 23:40:13] 2025-12-17 04:39:25,021 | INFO     | intersect: 3557030694.7768445
[2025-12-16 23:40:13] 2025-12-17 04:39:25,022 | INFO     | chi2: 0.9866595020050699
[2025-12-16 23:40:13] 2025-12-17 04:39:25,022 | INFO     | current chi2=0.9866595020050699 (change=3.616991438018017 %)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,022 | INFO     | left removable region: 20
[2025-12-16 23:40:13] 2025-12-17 04:39:25,023 | INFO     | sum of square deviations: 37382179115.71866
[2025-12-16 23:40:13] 2025-12-17 04:39:25,074 | INFO     | sum of deviations: 585899818.7145752
[2025-12-16 23:40:13] 2025-12-17 04:39:25,075 | INFO     | mean x: 1765930874.6255062
[2025-12-16 23:40:13] 2025-12-17 04:39:25,075 | INFO     | mean y: 2528435.6417004047
[2025-12-16 23:40:13] 2025-12-17 04:39:25,075 | INFO     | intersect: -25149420.59302339
[2025-12-16 23:40:13] 2025-12-17 04:39:25,076 | INFO     | chi2: 0.13250831044457093
[2025-12-16 23:40:13] 2025-12-17 04:39:25,076 | INFO     | current memory leak: 0.02 B/s (using 494 data points, chi2=0.13)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | could have reported an average CPU frequency of 2596 MHz (21 samples)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | ..............................
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | . Timing measurements:
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | . get job = 0 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | . initial setup = 4 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | . payload setup = 39 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,081 | INFO     | . stage-in = 0 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,082 | INFO     | . payload execution = 31730 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,082 | INFO     | . stage-out = 7 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,082 | INFO     | . log creation = 0 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,082 | INFO     | ..............................
[2025-12-16 23:40:13] 2025-12-17 04:39:25,439 | INFO     | 
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | job summary report
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | --------------------------------------------------
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | PanDA job id: 6931443264
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | task id: 47898763
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | errors: (none)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | pilot state: finished 
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | transexitcode: 0
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | exeerrorcode: 0
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | exeerrordiag: 
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | exitcode: 0
[2025-12-16 23:40:13] 2025-12-17 04:39:25,440 | INFO     | exitmsg: OK
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | cpuconsumptiontime: 63618 s
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | nevents: 400
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | neventsw: 0
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | pid: 1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | pgrp: 1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | corecount: 8
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | event service: False
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | sizes: {0: 2283130, 1: 2283731, 2: 2283843, 3: 2284042, 4: 2284042, 16: 2284070, 27: 2284226, 32: 2284516, 38: 2284544, 31773: 2322888, 31774: 2322887, 31783: 2332
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | --------------------------------------------------
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | 
[2025-12-16 23:40:13] 2025-12-17 04:39:25,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 23:40:13] 2025-12-17 04:39:25,591 | INFO     | job 6931443264 has completed (purged errors)
[2025-12-16 23:40:13] 2025-12-17 04:39:25,591 | INFO     | overall cleanup function is called
[2025-12-16 23:40:13] 2025-12-17 04:39:26,599 | INFO     | --- collectZombieJob: --- 10, [1055826]
[2025-12-16 23:40:13] 2025-12-17 04:39:26,600 | INFO     | zombie collector waiting for pid 1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:26,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 23:40:13] 2025-12-17 04:39:26,600 | INFO     | collected zombie processes
[2025-12-16 23:40:13] 2025-12-17 04:39:26,600 | INFO     | will attempt to kill all subprocesses of pid=1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:28,996 | INFO     | process IDs to be killed: [1055826] (in reverse order)
[2025-12-16 23:40:13] 2025-12-17 04:39:29,320 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 23:40:13] 2025-12-17 04:39:29,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 23:40:13] 2025-12-17 04:39:29,401 | INFO     | did not find any defunct processes belonging to 1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:29,517 | INFO     | did not find any defunct processes belonging to 1055826
[2025-12-16 23:40:13] 2025-12-17 04:39:29,518 | INFO     | ready for new job
[2025-12-16 23:40:13] 2025-12-17 04:39:29,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 23:40:13] 2025-12-17 04:39:29,542 | INFO     | ***************************************
[2025-12-16 23:40:13] 2025-12-17 04:39:29,565 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 23:40:13] 2025-12-17 04:39:29,565 | INFO     | ***************************************
[2025-12-16 23:40:13] 2025-12-17 04:39:29,565 | INFO     | 
[2025-12-16 23:40:13] 2025-12-17 04:39:29,592 | INFO     | architecture information:
[2025-12-16 23:40:13] 2025-12-17 04:39:29,616 | INFO     | executing command: cat /etc/os-release
[2025-12-16 23:40:13] 2025-12-17 04:39:29,729 | INFO     | cat /etc/os-release:
[2025-12-16 23:40:13] NAME="CentOS Linux"
[2025-12-16 23:40:13] VERSION="7 (Core)"
[2025-12-16 23:40:13] ID="centos"
[2025-12-16 23:40:13] ID_LIKE="rhel fedora"
[2025-12-16 23:40:13] VERSION_ID="7"
[2025-12-16 23:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 23:40:13] ANSI_COLOR="0;31"
[2025-12-16 23:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 23:40:13] HOME_URL="https://www.centos.org/"
[2025-12-16 23:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 23:40:13] 
[2025-12-16 23:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 23:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 23:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 23:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 23:40:13] 
[2025-12-16 23:40:13] 2025-12-17 04:39:29,729 | INFO     | ***************************************
[2025-12-16 23:40:13] 2025-12-17 04:39:30,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-16 23:40:13] 2025-12-17 04:39:30,292 | INFO     | sufficient remaining disk space (74171023360 B)
[2025-12-16 23:40:13] 2025-12-17 04:39:30,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 23:40:13] 2025-12-17 04:39:30,292 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 23:40:13] 2025-12-17 04:39:30,292 | INFO     | update_server=False
[2025-12-16 23:40:13] 2025-12-17 04:39:30,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 23:40:13] 2025-12-17 04:39:30,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:40:13] 2025-12-17 04:39:30,293 | INFO     | aborting loop
[2025-12-16 23:40:13] 2025-12-17 04:39:30,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 23:40:13] 2025-12-17 04:39:30,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 23:40:13] 2025-12-17 04:39:30,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 23:40:13] 2025-12-17 04:39:30,788 | INFO     | all job control threads have been joined
[2025-12-16 23:40:13] 2025-12-17 04:39:31,298 | INFO     | [job] retrieve thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,299 | INFO     | [job] job monitor thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,305 | INFO     | all data control threads have been joined
[2025-12-16 23:40:13] 2025-12-17 04:39:31,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,363 | INFO     | all payload control threads have been joined
[2025-12-16 23:40:13] 2025-12-17 04:39:31,397 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,490 | INFO     | [job] queue monitor thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,751 | INFO     | [payload] validate_post thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,794 | INFO     | [job] control thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,967 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:31,984 | INFO     | [data] copytool_in thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,249 | INFO     | [job] validate thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,250 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,311 | INFO     | [data] control thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,369 | INFO     | [payload] control thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,411 | INFO     | [payload] failed_post thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:32,617 | INFO     | [data] copytool_out thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:34,304 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 23:40:13] 2025-12-17 04:39:58,830 | INFO     | PID=1047466 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 23:40:13] 2025-12-17 04:39:58,830 | INFO     | .. there are 23 such processes running
[2025-12-16 23:40:13] 2025-12-17 04:39:58,830 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 23:40:13] 2025-12-17 04:39:58,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 23:40:13] 2025-12-17 04:39:58,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 23:40:13] 2025-12-17 04:40:05,250 | INFO     | [monitor] cgroup control has ended
[2025-12-16 23:40:13] 2025-12-17 04:40:05,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678249764672)>', '<ExcThread(monitor, started 139677755496192)>']
[2025-12-16 23:40:13] 2025-12-17 04:40:05,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 23:40:13] 2025-12-17 04:40:05,872 | INFO     | [monitor] control thread has ended
[2025-12-16 23:40:13] 2025-12-17 04:40:10,314 | INFO     | all workflow threads have been joined
[2025-12-16 23:40:13] 2025-12-17 04:40:10,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 23:40:13] 2025-12-17 04:40:10,315 | INFO     | traces error code: 0
[2025-12-16 23:40:13] 2025-12-17 04:40:10,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 23:40:13] 2025-12-17 04:40:12,011 [wrapper] ==== pilot stdout END ====
[2025-12-16 23:40:13] 2025-12-17 04:40:12,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 23:40:13] 2025-12-17 04:40:12,042 [wrapper] pilotpid: 1047466
[2025-12-16 23:40:13] 2025-12-17 04:40:12,063 [wrapper] Pilot exit status: 0
[2025-12-16 23:40:13] 2025-12-17 04:40:12,159 [wrapper] pandaids: 6931443264
[2025-12-16 23:40:13] 2025-12-17 04:40:12,378 [wrapper] cleanup supervisor_pilot 2781850 1047467
[2025-12-16 23:40:13] 2025-12-17 04:40:12,392 [wrapper] Test setup, not cleaning
[2025-12-16 23:40:13] 2025-12-17 04:40:12,422 [wrapper] apfmon messages muted
[2025-12-16 23:40:13] 2025-12-17 04:40:12,436 [wrapper] ==== wrapper stdout END ====
[2025-12-16 23:40:13] 2025-12-17 04:40:12,451 [wrapper] ==== wrapper stderr END ====
[2025-12-16 23:40:13]  *** Error codes and diagnostics ***
[2025-12-16 23:40:13]     "exeErrorCode": 0,
[2025-12-16 23:40:13]     "exeErrorDiag": "",
[2025-12-16 23:40:13]     "pilotErrorCode": 0,
[2025-12-16 23:40:13]     "pilotErrorDiag": "",
[2025-12-16 23:40:13]  *** Listing of results directory ***
[2025-12-16 23:40:13] total 443896
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 10:02 queuedata.json
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 10:02 pilot3.tar.gz
[2025-12-16 23:40:13] -rwx------. 1 boincer umatlas     36322 Dec 16 10:02 runpilot2-wrapper.sh
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas       100 Dec 16 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 23:40:13] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 14:46 run_atlas
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas       105 Dec 16 14:46 job.xml
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas 221603344 Dec 16 14:46 EVNT.47898761._000777.pool.root.1
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas    592399 Dec 16 14:46 input.tar.gz
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 14:46 start_atlas.sh
[2025-12-16 23:40:13] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 14:46 shared
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas         0 Dec 16 14:46 boinc_lockfile
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas      2508 Dec 16 14:47 pandaJob.out
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas        57 Dec 16 14:47 setup.sh.local
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas    987409 Dec 16 14:48 agis_schedconf.cvmfs.json
[2025-12-16 23:40:13] drwx------. 5 boincer umatlas      4096 Dec 16 14:48 pilot3
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas 220118580 Dec 16 23:37 HITS.47898763._019999.pool.root.1
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas       531 Dec 16 23:37 boinc_task_state.xml
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas      1044 Dec 16 23:38 memory_monitor_summary.json
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas   1516240 Dec 16 23:38 agis_ddmendpoints.agis.ALL.json
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas    654335 Dec 16 23:38 log.47898763._019999.job.log.tgz.1
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas        95 Dec 16 23:39 pilot_heartbeat.json
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas      6877 Dec 16 23:39 init_data.xml
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas      7821 Dec 16 23:39 heartbeat.json
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 23:40 boinc_mmap_file
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas        28 Dec 16 23:40 wrapper_checkpoint.txt
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas      4824 Dec 16 23:40 pilotlog.txt
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas   3798672 Dec 16 23:40 log.47898763._019999.job.log.1
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas       357 Dec 16 23:40 output.list
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas       620 Dec 16 23:40 runtime_log
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas   4474880 Dec 16 23:40 result.tar.gz
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas      9348 Dec 16 23:40 runtime_log.err
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas       659 Dec 16 23:40 g4YNDmNklp8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVhVKDmtvIR3m.diag
[2025-12-16 23:40:13] -rw-r--r--. 1 boincer umatlas     21537 Dec 16 23:40 stderr.txt
[2025-12-16 23:40:13] HITS file was successfully produced:
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas 220118580 Dec 16 23:37 shared/HITS.pool.root.1
[2025-12-16 23:40:13]  *** Contents of shared directory: ***
[2025-12-16 23:40:13] total 436348
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas 221603344 Dec 16 14:46 ATLAS.root_0
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas    592399 Dec 16 14:46 input.tar.gz
[2025-12-16 23:40:13] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 14:46 start_atlas.sh
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas 220118580 Dec 16 23:37 HITS.pool.root.1
[2025-12-16 23:40:13] -rw-------. 1 boincer umatlas   4474880 Dec 16 23:40 result.tar.gz
23:40:14 (1042533): run_atlas exited; CPU time 65166.237647
23:40:14 (1042533): called boinc_finish(0)

</stderr_txt>
]]>

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