Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:05 (2622436): wrapper (7.7.26015): starting
14:47:05 (2622436): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 14:47:05] Arguments: --nthreads 8
[2025-12-16 14:47:05] Threads: 8
[2025-12-16 14:47:05] Checking for CVMFS
[2025-12-16 14:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 14:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 14:47:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 14:47:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 14:47:07] 2.13.3.0 11959 59290 360568 154084 3 271 19219984 32935936 24605 16776704 0 298101791 99.449 410764662 33650 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 14:47:07] CVMFS is ok
[2025-12-16 14:47:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 14:47:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 14:47:07] Further information can be found at the LHC@home message board.
[2025-12-16 14:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 14:47:07] Checking for apptainer binary...
[2025-12-16 14:47:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 14:47:07] Running /usr/bin/apptainer --version
[2025-12-16 14:47:07] apptainer version 1.4.5-2.el9
[2025-12-16 14:47:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 14:47:08] c6-12-27-3.aglt2.org
[2025-12-16 14:47:08] apptainer works
[2025-12-16 14:47:08] Set ATHENA_PROC_NUMBER=8
[2025-12-16 14:47:08] Set ATHENA_CORE_NUMBER=8
[2025-12-16 14:47:08] Starting ATLAS job with PandaID=6929464701
[2025-12-16 14:47:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 21:26:56]  *** The last 200 lines of the pilot log: ***
[2025-12-16 21:26:56] 2025-12-17 02:26:13,161 | INFO     | time since job start (23893s) is within the limit (174528.0s)
[2025-12-16 21:26:56] 2025-12-17 02:26:14,666 | INFO     | monitor loop #1413: job 0:6929464701 is in state 'finished'
[2025-12-16 21:26:56] 2025-12-17 02:26:14,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:26:56] 2025-12-17 02:26:15,170 | INFO     | time since job start (23895s) is within the limit (174528.0s)
[2025-12-16 21:26:56] 2025-12-17 02:26:17,177 | INFO     | monitor loop #1414: job 0:6929464701 is in state 'finished'
[2025-12-16 21:26:56] 2025-12-17 02:26:17,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 21:26:56] 2025-12-17 02:26:17,179 | INFO     | time since job start (23897s) is within the limit (174528.0s)
[2025-12-16 21:26:56] 2025-12-17 02:26:17,179 | INFO     | 23900s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-16 21:26:56] 2025-12-17 02:26:18,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 21:26:56] 2025-12-17 02:26:18,808 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2681.8514687499996
[2025-12-16 21:26:56] 2025-12-17 02:26:18,826 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6929464701/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,827 | INFO     | extracted standard info from prmon json
[2025-12-16 21:26:56] 2025-12-17 02:26:18,827 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 21:26:56] 2025-12-17 02:26:18,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 21:26:56] 2025-12-17 02:26:18,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 21:26:56] 2025-12-17 02:26:18,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 21:26:56] 2025-12-17 02:26:18,834 | INFO     | fitting pss+swap vs Time
[2025-12-16 21:26:56] 2025-12-17 02:26:18,835 | INFO     | sum of square deviations: 18252922367.712147
[2025-12-16 21:26:56] 2025-12-17 02:26:18,839 | INFO     | sum of deviations: 1401948844.159378
[2025-12-16 21:26:56] 2025-12-17 02:26:18,839 | INFO     | mean x: 1765926457.2339332
[2025-12-16 21:26:56] 2025-12-17 02:26:18,839 | INFO     | mean y: 2519433.7455012854
[2025-12-16 21:26:56] 2025-12-17 02:26:18,839 | INFO     | intersect: -133115754.18303266
[2025-12-16 21:26:56] 2025-12-17 02:26:18,840 | INFO     | chi2: 2.718096786928711
[2025-12-16 21:26:56] 2025-12-17 02:26:18,840 | INFO     | sum of square deviations: 17558104184.90625
[2025-12-16 21:26:56] 2025-12-17 02:26:18,844 | INFO     | sum of deviations: 25933751973.765625
[2025-12-16 21:26:56] 2025-12-17 02:26:18,844 | INFO     | mean x: 1765926304.734375
[2025-12-16 21:26:56] 2025-12-17 02:26:18,844 | INFO     | mean y: 2524762.0859375
[2025-12-16 21:26:56] 2025-12-17 02:26:18,844 | INFO     | intersect: -2605791848.2175264
[2025-12-16 21:26:56] 2025-12-17 02:26:18,845 | INFO     | chi2: 2.0390161953086205
[2025-12-16 21:26:56] 2025-12-17 02:26:18,845 | INFO     | current chi2=2.0390161953086205 (change=24.983679568946165 %)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,845 | INFO     | right removable region: 383
[2025-12-16 21:26:56] 2025-12-17 02:26:18,846 | INFO     | sum of square deviations: 17558072282.43485
[2025-12-16 21:26:56] 2025-12-17 02:26:18,849 | INFO     | sum of deviations: -71335684089.32811
[2025-12-16 21:26:56] 2025-12-17 02:26:18,850 | INFO     | mean x: 1765926609.7369792
[2025-12-16 21:26:56] 2025-12-17 02:26:18,850 | INFO     | mean y: 2535319.234375
[2025-12-16 21:26:56] 2025-12-17 02:26:18,850 | INFO     | intersect: 7177217182.411332
[2025-12-16 21:26:56] 2025-12-17 02:26:18,850 | INFO     | chi2: 0.9193266721988917
[2025-12-16 21:26:56] 2025-12-17 02:26:18,850 | INFO     | current chi2=0.9193266721988917 (change=66.1775593635988 %)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,851 | INFO     | sum of square deviations: 16881082997.150478
[2025-12-16 21:26:56] 2025-12-17 02:26:18,855 | INFO     | sum of deviations: -65581553107.44063
[2025-12-16 21:26:56] 2025-12-17 02:26:18,855 | INFO     | mean x: 1765926762.2401056
[2025-12-16 21:26:56] 2025-12-17 02:26:18,855 | INFO     | mean y: 2534010.0158311347
[2025-12-16 21:26:56] 2025-12-17 02:26:18,855 | INFO     | intersect: 6863007343.465423
[2025-12-16 21:26:56] 2025-12-17 02:26:18,856 | INFO     | chi2: 0.900566572515902
[2025-12-16 21:26:56] 2025-12-17 02:26:18,856 | INFO     | current chi2=0.900566572515902 (change=2.040634765672402 %)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,856 | INFO     | left removable region: 20
[2025-12-16 21:26:56] 2025-12-17 02:26:18,856 | INFO     | sum of square deviations: 14832100924.148819
[2025-12-16 21:26:56] 2025-12-17 02:26:18,860 | INFO     | sum of deviations: -5492263739.140495
[2025-12-16 21:26:56] 2025-12-17 02:26:18,860 | INFO     | mean x: 1765926884.2396693
[2025-12-16 21:26:56] 2025-12-17 02:26:18,860 | INFO     | mean y: 2531161.495867769
[2025-12-16 21:26:56] 2025-12-17 02:26:18,860 | INFO     | intersect: 656446358.1280327
[2025-12-16 21:26:56] 2025-12-17 02:26:18,860 | INFO     | chi2: 0.07538646930998909
[2025-12-16 21:26:56] 2025-12-17 02:26:18,861 | INFO     | current memory leak: -0.37 B/s (using 363 data points, chi2=0.08)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,861 | INFO     | could have reported an average CPU frequency of 2739 MHz (16 samples)
[2025-12-16 21:26:56] 2025-12-17 02:26:18,861 | INFO     | ..............................
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . Timing measurements:
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . get job = 0 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . initial setup = 3 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . payload setup = 40 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . stage-in = 0 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . payload execution = 23739 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . stage-out = 6 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | . log creation = 1 s
[2025-12-16 21:26:56] 2025-12-17 02:26:18,862 | INFO     | ..............................
[2025-12-16 21:26:56] 2025-12-17 02:26:19,191 | INFO     | time since job start (23899s) is within the limit (174528.0s)
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | 
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | job summary report
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | --------------------------------------------------
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | PanDA job id: 6929464701
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | task id: 47898763
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | errors: (none)
[2025-12-16 21:26:56] 2025-12-17 02:26:19,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | pilot state: finished 
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | transexitcode: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | exeerrorcode: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | exeerrordiag: 
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | exitcode: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | exitmsg: OK
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | cpuconsumptiontime: 60304 s
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | nevents: 400
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | neventsw: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | pid: 2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | pgrp: 2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | corecount: 8
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | event service: False
[2025-12-16 21:26:56] 2025-12-17 02:26:19,204 | INFO     | sizes: {0: 2283783, 1: 2283982, 2: 2283982, 12: 2284010, 23: 2284038, 34: 2284066, 35: 2284484, 45: 2284512, 23784: 2319248, 23785: 2319247, 23791: 2328301, 23794:
[2025-12-16 21:26:56] 2025-12-17 02:26:19,205 | INFO     | --------------------------------------------------
[2025-12-16 21:26:56] 2025-12-17 02:26:19,205 | INFO     | 
[2025-12-16 21:26:56] 2025-12-17 02:26:19,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-16 21:26:56] 2025-12-17 02:26:19,274 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,274 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,274 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 21:26:56] 2025-12-17 02:26:19,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 21:26:56] 2025-12-17 02:26:19,284 | INFO     | job 6929464701 has completed (purged errors)
[2025-12-16 21:26:56] 2025-12-17 02:26:19,284 | INFO     | overall cleanup function is called
[2025-12-16 21:26:56] 2025-12-17 02:26:20,293 | INFO     | --- collectZombieJob: --- 10, [2642704]
[2025-12-16 21:26:56] 2025-12-17 02:26:20,293 | INFO     | zombie collector waiting for pid 2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:20,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 21:26:56] 2025-12-17 02:26:20,293 | INFO     | collected zombie processes
[2025-12-16 21:26:56] 2025-12-17 02:26:20,293 | INFO     | will attempt to kill all subprocesses of pid=2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:21,390 | INFO     | process IDs to be killed: [2642704] (in reverse order)
[2025-12-16 21:26:56] 2025-12-17 02:26:21,665 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 21:26:56] 2025-12-17 02:26:21,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 21:26:56] 2025-12-17 02:26:21,698 | INFO     | did not find any defunct processes belonging to 2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:21,738 | INFO     | did not find any defunct processes belonging to 2642704
[2025-12-16 21:26:56] 2025-12-17 02:26:21,738 | INFO     | ready for new job
[2025-12-16 21:26:56] 2025-12-17 02:26:21,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 21:26:56] 2025-12-17 02:26:21,745 | INFO     | ***************************************
[2025-12-16 21:26:56] 2025-12-17 02:26:21,745 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 21:26:56] 2025-12-17 02:26:21,745 | INFO     | ***************************************
[2025-12-16 21:26:56] 2025-12-17 02:26:21,745 | INFO     | 
[2025-12-16 21:26:56] 2025-12-17 02:26:21,755 | INFO     | architecture information:
[2025-12-16 21:26:56] 2025-12-17 02:26:21,759 | INFO     | executing command: cat /etc/os-release
[2025-12-16 21:26:56] 2025-12-17 02:26:21,811 | INFO     | cat /etc/os-release:
[2025-12-16 21:26:56] NAME="CentOS Linux"
[2025-12-16 21:26:56] VERSION="7 (Core)"
[2025-12-16 21:26:56] ID="centos"
[2025-12-16 21:26:56] ID_LIKE="rhel fedora"
[2025-12-16 21:26:56] VERSION_ID="7"
[2025-12-16 21:26:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 21:26:56] ANSI_COLOR="0;31"
[2025-12-16 21:26:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 21:26:56] HOME_URL="https://www.centos.org/"
[2025-12-16 21:26:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 21:26:56] 
[2025-12-16 21:26:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 21:26:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 21:26:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 21:26:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 21:26:56] 
[2025-12-16 21:26:56] 2025-12-17 02:26:21,811 | INFO     | ***************************************
[2025-12-16 21:26:56] 2025-12-17 02:26:22,322 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-16 21:26:56] 2025-12-17 02:26:22,381 | INFO     | sufficient remaining disk space (94049927168 B)
[2025-12-16 21:26:56] 2025-12-17 02:26:22,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 21:26:56] 2025-12-17 02:26:22,382 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 21:26:56] 2025-12-17 02:26:22,382 | INFO     | update_server=False
[2025-12-16 21:26:56] 2025-12-17 02:26:22,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 21:26:56] 2025-12-17 02:26:23,229 | INFO     | all data control threads have been joined
[2025-12-16 21:26:56] 2025-12-17 02:26:23,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:26:56] 2025-12-17 02:26:23,253 | INFO     | aborting loop
[2025-12-16 21:26:56] 2025-12-17 02:26:23,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 21:26:56] 2025-12-17 02:26:23,388 | INFO     | [job] retrieve thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:23,393 | INFO     | [payload] failed_post thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:23,425 | INFO     | [payload] validate_post thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:23,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:23,526 | INFO     | [data] copytool_in thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:23,660 | INFO     | all payload control threads have been joined
[2025-12-16 21:26:56] 2025-12-17 02:26:23,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 21:26:56] 2025-12-17 02:26:24,085 | INFO     | all job control threads have been joined
[2025-12-16 21:26:56] 2025-12-17 02:26:24,138 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,138 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,139 | INFO     | [job] validate thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,146 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,235 | INFO     | [data] control thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 21:26:56] 2025-12-17 02:26:24,259 | INFO     | [job] job monitor thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:24,666 | INFO     | [payload] control thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:25,091 | INFO     | [job] control thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:25,241 | INFO     | [job] queue monitor thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:25,261 | INFO     | [data] copytool_out thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:27,782 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 21:26:56] 2025-12-17 02:26:43,060 | INFO     | [monitor] cgroup control has ended
[2025-12-16 21:26:56] 2025-12-17 02:26:44,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699624294208)>', '<ExcThread(monitor, started 140698833647360)>']
[2025-12-16 21:26:56] 2025-12-17 02:26:49,890 | INFO     | all workflow threads have been joined
[2025-12-16 21:26:56] 2025-12-17 02:26:49,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 21:26:56] 2025-12-17 02:26:49,890 | INFO     | traces error code: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:49,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 21:26:56] 2025-12-17 02:26:54,254 | INFO     | PID=2632138 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 21:26:56] 2025-12-17 02:26:54,254 | INFO     | .. there are 24 such processes running
[2025-12-16 21:26:56] 2025-12-17 02:26:54,255 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 21:26:56] 2025-12-17 02:26:54,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 21:26:56] 2025-12-17 02:26:54,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 21:26:56] 2025-12-17 02:26:54,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 21:26:56] 2025-12-17 02:26:54,255 | INFO     | [monitor] control thread has ended
[2025-12-16 21:26:56] 2025-12-17 02:26:54,829 [wrapper] ==== pilot stdout END ====
[2025-12-16 21:26:56] 2025-12-17 02:26:54,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 21:26:56] 2025-12-17 02:26:54,876 [wrapper] pilotpid: 2632138
[2025-12-16 21:26:56] 2025-12-17 02:26:54,910 [wrapper] Pilot exit status: 0
[2025-12-16 21:26:56] 2025-12-17 02:26:55,081 [wrapper] pandaids: 6929464701
[2025-12-16 21:26:56] 2025-12-17 02:26:55,236 [wrapper] cleanup supervisor_pilot 4045181 2632139
[2025-12-16 21:26:56] 2025-12-17 02:26:55,260 [wrapper] Test setup, not cleaning
[2025-12-16 21:26:56] 2025-12-17 02:26:55,288 [wrapper] apfmon messages muted
[2025-12-16 21:26:56] 2025-12-17 02:26:55,317 [wrapper] ==== wrapper stdout END ====
[2025-12-16 21:26:56] 2025-12-17 02:26:55,332 [wrapper] ==== wrapper stderr END ====
[2025-12-16 21:26:56]  *** Error codes and diagnostics ***
[2025-12-16 21:26:56]     "exeErrorCode": 0,
[2025-12-16 21:26:56]     "exeErrorDiag": "",
[2025-12-16 21:26:56]     "pilotErrorCode": 0,
[2025-12-16 21:26:56]     "pilotErrorDiag": "",
[2025-12-16 21:26:56]  *** Listing of results directory ***
[2025-12-16 21:26:56] total 449456
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 09:14 pilot3.tar.gz
[2025-12-16 21:26:56] -rwx------. 1 boincer umatlas     36322 Dec 14 09:19 runpilot2-wrapper.sh
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 09:22 queuedata.json
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas       100 Dec 16 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 21:26:56] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 14:47 run_atlas
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas       105 Dec 16 14:47 job.xml
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas 224720726 Dec 16 14:47 EVNT.47898761._000496.pool.root.1
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 14:47 start_atlas.sh
[2025-12-16 21:26:56] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 14:47 shared
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas    592402 Dec 16 14:47 input.tar.gz
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas         0 Dec 16 14:47 boinc_lockfile
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas      2505 Dec 16 14:47 pandaJob.out
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas        57 Dec 16 14:47 setup.sh.local
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas    987409 Dec 16 14:47 agis_schedconf.cvmfs.json
[2025-12-16 21:26:56] drwx------. 5 boincer umatlas      4096 Dec 16 14:48 pilot3
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas      6879 Dec 16 21:20 init_data.xml
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas 224662357 Dec 16 21:24 HITS.47898763._011130.pool.root.1
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas       531 Dec 16 21:24 boinc_task_state.xml
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas      1041 Dec 16 21:25 memory_monitor_summary.json
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas   1516240 Dec 16 21:25 agis_ddmendpoints.agis.ALL.json
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas    556462 Dec 16 21:25 log.47898763._011130.job.log.tgz.1
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas        95 Dec 16 21:26 pilot_heartbeat.json
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas      7821 Dec 16 21:26 heartbeat.json
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas       823 Dec 16 21:26 pilotlog.txt
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas   2918539 Dec 16 21:26 log.47898763._011130.job.log.1
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 21:26 boinc_mmap_file
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas       357 Dec 16 21:26 output.list
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas        28 Dec 16 21:26 wrapper_checkpoint.txt
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas       620 Dec 16 21:26 runtime_log
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas   3491840 Dec 16 21:26 result.tar.gz
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas      9353 Dec 16 21:26 runtime_log.err
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas       659 Dec 16 21:26 9VLMDmd71o8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrWRKDm7tBPcn.diag
[2025-12-16 21:26:56] -rw-r--r--. 1 boincer umatlas     21457 Dec 16 21:26 stderr.txt
[2025-12-16 21:26:56] HITS file was successfully produced:
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas 224662357 Dec 16 21:24 shared/HITS.pool.root.1
[2025-12-16 21:26:56]  *** Contents of shared directory: ***
[2025-12-16 21:26:56] total 442868
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas 224720726 Dec 16 14:47 ATLAS.root_0
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 14:47 start_atlas.sh
[2025-12-16 21:26:56] -rw-r--r--. 2 boincer umatlas    592402 Dec 16 14:47 input.tar.gz
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas 224662357 Dec 16 21:24 HITS.pool.root.1
[2025-12-16 21:26:56] -rw-------. 1 boincer umatlas   3491840 Dec 16 21:26 result.tar.gz
21:26:57 (2622436): run_atlas exited; CPU time 61386.731936
21:26:57 (2622436): called boinc_finish(0)

</stderr_txt>
]]>

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