Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:31:18 (4073223): wrapper (7.7.26015): starting
15:31:18 (4073223): wrapper: running run_atlas (--nthreads 8)
[2025-12-16 15:31:18] Arguments: --nthreads 8
[2025-12-16 15:31:18] Threads: 8
[2025-12-16 15:31:18] Checking for CVMFS
[2025-12-16 15:31:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-16 15:31:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-16 15:31:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-16 15:31:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-16 15:31:20] 2.13.3.0 12601 59334 342124 154087 1 221 19958376 32935936 30492 16776704 0 279085218 99.460 374839847 32748 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-16 15:31:20] CVMFS is ok
[2025-12-16 15:31:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-16 15:31:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-16 15:31:20] Further information can be found at the LHC@home message board.
[2025-12-16 15:31:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-16 15:31:20] Checking for apptainer binary...
[2025-12-16 15:31:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-16 15:31:20] Running /usr/bin/apptainer --version
[2025-12-16 15:31:20] apptainer version 1.4.5-2.el9
[2025-12-16 15:31:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-16 15:31:21] c6-12-27-4.aglt2.org
[2025-12-16 15:31:21] apptainer works
[2025-12-16 15:31:21] Set ATHENA_PROC_NUMBER=8
[2025-12-16 15:31:21] Set ATHENA_CORE_NUMBER=8
[2025-12-16 15:31:21] Starting ATLAS job with PandaID=6930228801
[2025-12-16 15:31:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-16 20:39:27]  *** The last 200 lines of the pilot log: ***
[2025-12-16 20:39:27] 2025-12-17 01:38:49,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:39:27] 2025-12-17 01:38:49,558 | INFO     | time since job start (18372s) is within the limit (174528.0s)
[2025-12-16 20:39:27] 2025-12-17 01:38:51,565 | INFO     | time since job start (18374s) is within the limit (174528.0s)
[2025-12-16 20:39:27] 2025-12-17 01:38:51,840 | INFO     | monitor loop #1105: job 0:6930228801 is in state 'finished'
[2025-12-16 20:39:27] 2025-12-17 01:38:51,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:39:27] 2025-12-17 01:38:53,572 | INFO     | time since job start (18376s) is within the limit (174528.0s)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,346 | INFO     | monitor loop #1106: job 0:6930228801 is in state 'finished'
[2025-12-16 20:39:27] 2025-12-17 01:38:54,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,618 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-16 20:39:27] 2025-12-17 01:38:54,635 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2723.4971562500004
[2025-12-16 20:39:27] 2025-12-17 01:38:54,661 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6930228801/memory_monitor_summary.json (trf name=prmon)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,661 | INFO     | extracted standard info from prmon json
[2025-12-16 20:39:27] 2025-12-17 01:38:54,662 | INFO     | extracted standard memory fields from prmon json
[2025-12-16 20:39:27] 2025-12-17 01:38:54,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-16 20:39:27] 2025-12-17 01:38:54,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-16 20:39:27] 2025-12-17 01:38:54,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-16 20:39:27] 2025-12-17 01:38:54,669 | INFO     | fitting pss+swap vs Time
[2025-12-16 20:39:27] 2025-12-17 01:38:54,670 | INFO     | sum of square deviations: 8288783763.056831
[2025-12-16 20:39:27] 2025-12-17 01:38:54,677 | INFO     | sum of deviations: 63063431688.99996
[2025-12-16 20:39:27] 2025-12-17 01:38:54,684 | INFO     | mean x: 1765926381.270903
[2025-12-16 20:39:27] 2025-12-17 01:38:54,684 | INFO     | mean y: 2491426.0
[2025-12-16 20:39:27] 2025-12-17 01:38:54,685 | INFO     | intersect: -13433180307.82382
[2025-12-16 20:39:27] 2025-12-17 01:38:54,685 | INFO     | chi2: 3.4531971964121477
[2025-12-16 20:39:27] 2025-12-17 01:38:54,686 | INFO     | sum of square deviations: 7879843756.806157
[2025-12-16 20:39:27] 2025-12-17 01:38:54,688 | INFO     | sum of deviations: 83089245504.60197
[2025-12-16 20:39:27] 2025-12-17 01:38:54,709 | INFO     | mean x: 1765926228.7653062
[2025-12-16 20:39:27] 2025-12-17 01:38:54,709 | INFO     | mean y: 2498787.2551020407
[2025-12-16 20:39:27] 2025-12-17 01:38:54,710 | INFO     | intersect: -18618362551.291103
[2025-12-16 20:39:27] 2025-12-17 01:38:54,710 | INFO     | chi2: 2.5904192580006136
[2025-12-16 20:39:27] 2025-12-17 01:38:54,710 | INFO     | current chi2=2.5904192580006136 (change=24.98490208749027 %)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,710 | INFO     | right removable region: 293
[2025-12-16 20:39:27] 2025-12-17 01:38:54,711 | INFO     | sum of square deviations: 7879849065.18368
[2025-12-16 20:39:27] 2025-12-17 01:38:54,735 | INFO     | sum of deviations: -11671204563.755098
[2025-12-16 20:39:27] 2025-12-17 01:38:54,736 | INFO     | mean x: 1765926533.7755103
[2025-12-16 20:39:27] 2025-12-17 01:38:54,736 | INFO     | mean y: 2519215.534013605
[2025-12-16 20:39:27] 2025-12-17 01:38:54,736 | INFO     | intersect: 2618113708.494841
[2025-12-16 20:39:27] 2025-12-17 01:38:54,736 | INFO     | chi2: 1.0141593811908174
[2025-12-16 20:39:27] 2025-12-17 01:38:54,736 | INFO     | current chi2=1.0141593811908174 (change=70.63129258171172 %)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,737 | INFO     | sum of square deviations: 7484589042.297587
[2025-12-16 20:39:27] 2025-12-17 01:38:54,753 | INFO     | sum of deviations: -22499034218.107265
[2025-12-16 20:39:27] 2025-12-17 01:38:54,753 | INFO     | mean x: 1765926686.2802768
[2025-12-16 20:39:27] 2025-12-17 01:38:54,753 | INFO     | mean y: 2523376.84083045
[2025-12-16 20:39:27] 2025-12-17 01:38:54,754 | INFO     | intersect: 5310983830.281046
[2025-12-16 20:39:27] 2025-12-17 01:38:54,754 | INFO     | chi2: 0.9576561083402271
[2025-12-16 20:39:27] 2025-12-17 01:38:54,754 | INFO     | current chi2=0.9576561083402271 (change=5.571439154291967 %)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,754 | INFO     | left removable region: 20
[2025-12-16 20:39:27] 2025-12-17 01:38:54,755 | INFO     | sum of square deviations: 6309020581.94141
[2025-12-16 20:39:27] 2025-12-17 01:38:54,757 | INFO     | sum of deviations: -7317707363.490846
[2025-12-16 20:39:27] 2025-12-17 01:38:54,757 | INFO     | mean x: 1765926808.2710624
[2025-12-16 20:39:27] 2025-12-17 01:38:54,779 | INFO     | mean y: 2533912.5201465203
[2025-12-16 20:39:27] 2025-12-17 01:38:54,779 | INFO     | intersect: 2050797258.6978066
[2025-12-16 20:39:27] 2025-12-17 01:38:54,780 | INFO     | chi2: 0.04467981771675633
[2025-12-16 20:39:27] 2025-12-17 01:38:54,780 | INFO     | current memory leak: -1.16 B/s (using 273 data points, chi2=0.04)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,781 | INFO     | could have reported an average CPU frequency of 2660 MHz (14 samples)
[2025-12-16 20:39:27] 2025-12-17 01:38:54,781 | INFO     | ..............................
[2025-12-16 20:39:27] 2025-12-17 01:38:54,781 | INFO     | . Timing measurements:
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . get job = 0 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . initial setup = 6 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . payload setup = 38 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . stage-in = 0 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . payload execution = 18244 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . stage-out = 2 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | . log creation = 0 s
[2025-12-16 20:39:27] 2025-12-17 01:38:54,782 | INFO     | ..............................
[2025-12-16 20:39:27] 2025-12-17 01:38:55,049 | INFO     | 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,050 | INFO     | job summary report
[2025-12-16 20:39:27] 2025-12-17 01:38:55,052 | INFO     | --------------------------------------------------
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | PanDA job id: 6930228801
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | task id: 47905907
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | errors: (none)
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | pilot state: finished 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | transexitcode: 0
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | exeerrorcode: 0
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | exeerrordiag: 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | exitcode: 0
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | exitmsg: OK
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | cpuconsumptiontime: 66216 s
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | nevents: 400
[2025-12-16 20:39:27] 2025-12-17 01:38:55,053 | INFO     | neventsw: 0
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | pid: 4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | pgrp: 4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | corecount: 8
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | event service: False
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | sizes: {0: 2283080, 1: 2283681, 2: 2283793, 3: 2283992, 14: 2283992, 25: 2284020, 32: 2284438, 36: 2284466, 18287: 2316638, 18288: 2316637, 18291: 2325691, 18295: 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | --------------------------------------------------
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | 
[2025-12-16 20:39:27] 2025-12-17 01:38:55,054 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-16 20:39:27] 2025-12-17 01:38:55,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-16 20:39:27] 2025-12-17 01:38:55,206 | INFO     | job 6930228801 has completed (purged errors)
[2025-12-16 20:39:27] 2025-12-17 01:38:55,207 | INFO     | overall cleanup function is called
[2025-12-16 20:39:27] 2025-12-17 01:38:56,224 | INFO     | --- collectZombieJob: --- 10, [4099781]
[2025-12-16 20:39:27] 2025-12-17 01:38:56,224 | INFO     | zombie collector waiting for pid 4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:56,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-16 20:39:27] 2025-12-17 01:38:56,224 | INFO     | collected zombie processes
[2025-12-16 20:39:27] 2025-12-17 01:38:56,225 | INFO     | will attempt to kill all subprocesses of pid=4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:56,946 | INFO     | process IDs to be killed: [4099781] (in reverse order)
[2025-12-16 20:39:27] 2025-12-17 01:38:57,095 | WARNING  | found no corresponding commands to process id(s)
[2025-12-16 20:39:27] 2025-12-17 01:38:57,096 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-16 20:39:27] 2025-12-17 01:38:57,127 | INFO     | did not find any defunct processes belonging to 4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:57,146 | INFO     | did not find any defunct processes belonging to 4099781
[2025-12-16 20:39:27] 2025-12-17 01:38:57,147 | INFO     | ready for new job
[2025-12-16 20:39:27] 2025-12-17 01:38:57,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-16 20:39:27] 2025-12-17 01:38:57,149 | INFO     | ***************************************
[2025-12-16 20:39:27] 2025-12-17 01:38:57,149 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-16 20:39:27] 2025-12-17 01:38:57,149 | INFO     | ***************************************
[2025-12-16 20:39:27] 2025-12-17 01:38:57,149 | INFO     | 
[2025-12-16 20:39:27] 2025-12-17 01:38:57,155 | INFO     | architecture information:
[2025-12-16 20:39:27] 2025-12-17 01:38:57,155 | INFO     | executing command: cat /etc/os-release
[2025-12-16 20:39:27] 2025-12-17 01:38:57,204 | INFO     | cat /etc/os-release:
[2025-12-16 20:39:27] NAME="CentOS Linux"
[2025-12-16 20:39:27] VERSION="7 (Core)"
[2025-12-16 20:39:27] ID="centos"
[2025-12-16 20:39:27] ID_LIKE="rhel fedora"
[2025-12-16 20:39:27] VERSION_ID="7"
[2025-12-16 20:39:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-16 20:39:27] ANSI_COLOR="0;31"
[2025-12-16 20:39:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-16 20:39:27] HOME_URL="https://www.centos.org/"
[2025-12-16 20:39:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-16 20:39:27] 
[2025-12-16 20:39:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-16 20:39:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-16 20:39:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-16 20:39:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-16 20:39:27] 
[2025-12-16 20:39:27] 2025-12-17 01:38:57,205 | INFO     | ***************************************
[2025-12-16 20:39:27] 2025-12-17 01:38:57,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-16 20:39:27] 2025-12-17 01:38:57,777 | INFO     | sufficient remaining disk space (94024761344 B)
[2025-12-16 20:39:27] 2025-12-17 01:38:57,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-16 20:39:27] 2025-12-17 01:38:57,778 | INFO     | current server update state: UPDATING_FINAL
[2025-12-16 20:39:27] 2025-12-17 01:38:57,778 | INFO     | update_server=False
[2025-12-16 20:39:27] 2025-12-17 01:38:57,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-16 20:39:27] 2025-12-17 01:38:57,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:39:27] 2025-12-17 01:38:57,865 | INFO     | aborting loop
[2025-12-16 20:39:27] 2025-12-17 01:38:57,968 | INFO     | all payload control threads have been joined
[2025-12-16 20:39:27] 2025-12-17 01:38:58,195 | INFO     | all job control threads have been joined
[2025-12-16 20:39:27] 2025-12-17 01:38:58,363 | INFO     | all data control threads have been joined
[2025-12-16 20:39:27] 2025-12-17 01:38:58,784 | INFO     | [job] retrieve thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:58,871 | INFO     | [job] job monitor thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:58,974 | INFO     | [payload] control thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,010 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-16 20:39:27] 2025-12-17 01:38:59,056 | INFO     | [payload] execute_payloads thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,173 | INFO     | [job] validate thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,203 | INFO     | [job] control thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,234 | INFO     | [payload] validate_pre thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-16 20:39:27] 2025-12-17 01:38:59,312 | INFO     | [data] copytool_in thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,369 | INFO     | [data] control thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:38:59,794 | INFO     | [job] create_data_payload thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:00,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-16 20:39:27] 2025-12-17 01:39:00,073 | INFO     | [payload] validate_post thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:00,182 | INFO     | [payload] failed_post thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:01,017 | INFO     | [data] copytool_out thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:01,069 | INFO     | [job] queue monitor thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:03,283 | INFO     | [data] queue_monitor thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:08,228 | INFO     | job.realtimelogging is not enabled
[2025-12-16 20:39:27] 2025-12-17 01:39:08,505 | INFO     | [monitor] cgroup control has ended
[2025-12-16 20:39:27] 2025-12-17 01:39:09,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-16 20:39:27] 2025-12-17 01:39:09,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525259974464)>', '<ExcThread(monitor, started 140524526749440)>']
[2025-12-16 20:39:27] 2025-12-17 01:39:14,856 | INFO     | all workflow threads have been joined
[2025-12-16 20:39:27] 2025-12-17 01:39:14,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-16 20:39:27] 2025-12-17 01:39:14,857 | INFO     | traces error code: 0
[2025-12-16 20:39:27] 2025-12-17 01:39:14,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-16 20:39:27] 2025-12-17 01:39:27,298 | INFO     | PID=4081806 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-16 20:39:27] 2025-12-17 01:39:27,298 | INFO     | .. there are 30 such processes running
[2025-12-16 20:39:27] 2025-12-17 01:39:27,298 | INFO     | found 0 job(s) in 20 queues
[2025-12-16 20:39:27] 2025-12-17 01:39:27,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-16 20:39:27] 2025-12-17 01:39:27,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-16 20:39:27] 2025-12-17 01:39:27,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-16 20:39:27] 2025-12-17 01:39:27,299 | INFO     | [monitor] control thread has ended
[2025-12-16 20:39:27] 2025-12-17 01:39:27,479 [wrapper] ==== pilot stdout END ====
[2025-12-16 20:39:27] 2025-12-17 01:39:27,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-16 20:39:27] 2025-12-17 01:39:27,484 [wrapper] pilotpid: 4081806
[2025-12-16 20:39:27] 2025-12-17 01:39:27,486 [wrapper] Pilot exit status: 0
[2025-12-16 20:39:27] 2025-12-17 01:39:27,504 [wrapper] pandaids: 6930228801
[2025-12-16 20:39:27] 2025-12-17 01:39:27,606 [wrapper] cleanup supervisor_pilot  820357 4081808
[2025-12-16 20:39:27] 2025-12-17 01:39:27,609 [wrapper] Test setup, not cleaning
[2025-12-16 20:39:27] 2025-12-17 01:39:27,612 [wrapper] apfmon messages muted
[2025-12-16 20:39:27] 2025-12-17 01:39:27,615 [wrapper] ==== wrapper stdout END ====
[2025-12-16 20:39:27] 2025-12-17 01:39:27,617 [wrapper] ==== wrapper stderr END ====
[2025-12-16 20:39:27]  *** Error codes and diagnostics ***
[2025-12-16 20:39:27]     "exeErrorCode": 0,
[2025-12-16 20:39:27]     "exeErrorDiag": "",
[2025-12-16 20:39:27]     "pilotErrorCode": 0,
[2025-12-16 20:39:27]     "pilotErrorDiag": "",
[2025-12-16 20:39:27]  *** Listing of results directory ***
[2025-12-16 20:39:27] total 412540
[2025-12-16 20:39:27] -rwx------. 1 boincer umatlas     36322 Dec 15 21:09 runpilot2-wrapper.sh
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas    579449 Dec 15 21:12 pilot3.tar.gz
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas      5112 Dec 15 21:12 queuedata.json
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas       100 Dec 16 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-16 20:39:27] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 16 15:31 run_atlas
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas       105 Dec 16 15:31 job.xml
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas 205712407 Dec 16 15:31 EVNT.47905905._000034.pool.root.1
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 15:31 start_atlas.sh
[2025-12-16 20:39:27] drwxrwx--x. 2 boincer umatlas      4096 Dec 16 15:31 shared
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas    592390 Dec 16 15:31 input.tar.gz
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas         0 Dec 16 15:31 boinc_lockfile
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas      2475 Dec 16 15:31 pandaJob.out
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas        57 Dec 16 15:31 setup.sh.local
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas    987409 Dec 16 15:32 agis_schedconf.cvmfs.json
[2025-12-16 20:39:27] drwx------. 5 boincer umatlas      4096 Dec 16 15:32 pilot3
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas 207243292 Dec 16 20:37 HITS.47905907._000813.pool.root.1
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas       531 Dec 16 20:37 boinc_task_state.xml
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas      1044 Dec 16 20:38 memory_monitor_summary.json
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas   1516240 Dec 16 20:38 agis_ddmendpoints.agis.ALL.json
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas    502805 Dec 16 20:38 log.47905907._000813.job.log.tgz.1
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas        95 Dec 16 20:38 pilot_heartbeat.json
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas      7822 Dec 16 20:38 heartbeat.json
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas      6880 Dec 16 20:39 init_data.xml
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas        28 Dec 16 20:39 wrapper_checkpoint.txt
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas       823 Dec 16 20:39 pilotlog.txt
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas      8192 Dec 16 20:39 boinc_mmap_file
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas   2285801 Dec 16 20:39 log.47905907._000813.job.log.1
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas       357 Dec 16 20:39 output.list
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas       620 Dec 16 20:39 runtime_log
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas   2805760 Dec 16 20:39 result.tar.gz
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas      9353 Dec 16 20:39 runtime_log.err
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas       658 Dec 16 20:39 kTyNDmegZp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHGZKDmqLQRLo.diag
[2025-12-16 20:39:27] -rw-r--r--. 1 boincer umatlas     21426 Dec 16 20:39 stderr.txt
[2025-12-16 20:39:27] HITS file was successfully produced:
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas 207243292 Dec 16 20:37 shared/HITS.pool.root.1
[2025-12-16 20:39:27]  *** Contents of shared directory: ***
[2025-12-16 20:39:27] total 406620
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas 205712407 Dec 16 15:31 ATLAS.root_0
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas     15847 Dec 16 15:31 start_atlas.sh
[2025-12-16 20:39:27] -rw-r--r--. 2 boincer umatlas    592390 Dec 16 15:31 input.tar.gz
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas 207243292 Dec 16 20:37 HITS.pool.root.1
[2025-12-16 20:39:27] -rw-------. 1 boincer umatlas   2805760 Dec 16 20:39 result.tar.gz
20:39:29 (4073223): run_atlas exited; CPU time 67118.373623
20:39:29 (4073223): called boinc_finish(0)

</stderr_txt>
]]>

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