Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:17 (1997625): wrapper (7.7.26015): starting
05:44:17 (1997625): wrapper: running run_atlas (--nthreads 2)
[2025-12-17 05:44:17] Arguments: --nthreads 2
[2025-12-17 05:44:17] Threads: 2
[2025-12-17 05:44:17] Checking for CVMFS
[2025-12-17 05:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 05:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 05:44:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 05:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 05:44:17] 2.9.2.0 808238 5935 62084 154099 1 57 25253515 36864000 0 130560 0 3150554 99.987 216166 18601 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 05:44:17] CVMFS is ok
[2025-12-17 05:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 05:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 05:44:17] Further information can be found at the LHC@home message board.
[2025-12-17 05:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 05:44:17] Checking for apptainer binary...
[2025-12-17 05:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 05:44:17] Running /usr/bin/apptainer --version
[2025-12-17 05:44:17] apptainer version 1.4.1-1.1
[2025-12-17 05:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 05:44:17] magicA244
[2025-12-17 05:44:17] apptainer works
[2025-12-17 05:44:17] Set ATHENA_PROC_NUMBER=2
[2025-12-17 05:44:17] Set ATHENA_CORE_NUMBER=2
[2025-12-17 05:44:17] Starting ATLAS job with PandaID=6930660561
[2025-12-17 05:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 07:58:46]  *** The last 200 lines of the pilot log: ***
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | INFO     | current server update state: UPDATING_FINAL
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | INFO     | update_server=False
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:58:46] 2025-12-17 06:58:09,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-17 07:58:46] 2025-12-17 06:58:09,762 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-17 07:58:46] 2025-12-17 06:58:09,762 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-17 07:58:46] 2025-12-17 06:58:09,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-17 07:58:46] 2025-12-17 06:58:09,762 | INFO     | will abort loop
[2025-12-17 07:58:46] 2025-12-17 06:58:10,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-17 07:58:46] 2025-12-17 06:58:10,441 | INFO     | all payload control threads have been joined
[2025-12-17 07:58:46] 2025-12-17 06:58:10,724 | INFO     | [job] retrieve thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:10,725 | INFO     | [job] queue monitor thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:10,744 | INFO     | all data control threads have been joined
[2025-12-17 07:58:46] 2025-12-17 06:58:10,768 | INFO     | [job] job monitor thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:10,893 | INFO     | [payload] validate_pre thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,296 | INFO     | all job control threads have been joined
[2025-12-17 07:58:46] 2025-12-17 06:58:11,374 | INFO     | [payload] execute_payloads thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,447 | INFO     | [payload] control thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,520 | INFO     | [payload] failed_post thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,726 | INFO     | [data] copytool_out thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,750 | INFO     | [data] control thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:11,906 | INFO     | [job] validate thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:12,003 | INFO     | [job] create_data_payload thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:12,170 | INFO     | [data] copytool_in thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:12,208 | INFO     | [payload] validate_post thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:12,302 | INFO     | [job] control thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:14,271 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 07:58:46] 2025-12-17 06:58:39,601 | INFO     | PID=2001329 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-17 07:58:46] 2025-12-17 06:58:39,602 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 07:58:46] 2025-12-17 06:58:39,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 07:58:46] 2025-12-17 06:58:39,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 07:58:46] 2025-12-17 06:58:41,676 | INFO     | [monitor] cgroup control has ended
[2025-12-17 07:58:46] 2025-12-17 06:58:41,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496653629248)>', '<ExcThread(monitor, started 140496005482240)>']
[2025-12-17 07:58:46] 2025-12-17 06:58:42,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 07:58:46] 2025-12-17 06:58:42,618 | INFO     | [monitor] control thread has ended
[2025-12-17 07:58:46] 2025-12-17 06:58:46,737 | INFO     | all workflow threads have been joined
[2025-12-17 07:58:46] 2025-12-17 06:58:46,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 07:58:46] 2025-12-17 06:58:46,737 | INFO     | traces error code: 0
[2025-12-17 07:58:46] 2025-12-17 06:58:46,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 07:58:46] 2025-12-17 06:58:46,779 [wrapper] ==== pilot stdout END ====
[2025-12-17 07:58:46] 2025-12-17 06:58:46,782 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 07:58:46] 2025-12-17 06:58:46,785 [wrapper] pilotpid: 2001329
[2025-12-17 07:58:46] 2025-12-17 06:58:46,787 [wrapper] Pilot exit status: 0
[2025-12-17 07:58:46] 2025-12-17 06:58:46,792 [wrapper] pandaids: 6930660561
[2025-12-17 07:58:46] 2025-12-17 06:58:46,805 [wrapper] cleanup supervisor_pilot 2021562 2001330
[2025-12-17 07:58:46] 2025-12-17 06:58:46,807 [wrapper] Test setup, not cleaning
[2025-12-17 07:58:46] 2025-12-17 06:58:46,809 [wrapper] apfmon messages muted
[2025-12-17 07:58:46] 2025-12-17 06:58:46,811 [wrapper] ==== wrapper stdout END ====
[2025-12-17 07:58:46] 2025-12-17 06:58:46,813 [wrapper] ==== wrapper stderr END ====
[2025-12-17 07:58:46]  *** Error codes and diagnostics ***
[2025-12-17 07:58:46]     "exeErrorCode": 0,
[2025-12-17 07:58:46]     "exeErrorDiag": "",
[2025-12-17 07:58:46]     "pilotErrorCode": 0,
[2025-12-17 07:58:46]     "pilotErrorDiag": "",
[2025-12-17 07:58:46]  *** Listing of results directory ***
[2025-12-17 07:58:46] total 334496
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      5112 Dec 16 05:16 queuedata.json
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc    579449 Dec 16 05:16 pilot3.tar.gz
[2025-12-17 07:58:46] -rwx------ 1 boinc boinc     36322 Dec 16 05:16 runpilot2-wrapper.sh
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc       100 Dec 17 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 07:58:46] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 05:44 run_atlas
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc       105 Dec 17 05:44 job.xml
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc 189728486 Dec 17 05:44 EVNT.47886829._000463.pool.root.1
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc    592411 Dec 17 05:44 input.tar.gz
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc     15847 Dec 17 05:44 start_atlas.sh
[2025-12-17 07:58:46] drwxrwx--x 2 boinc boinc      4096 Dec 17 05:44 shared
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc         0 Dec 17 05:44 boinc_setup_complete
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      6209 Dec 17 05:44 init_data.xml
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc         0 Dec 17 05:44 boinc_lockfile
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      2539 Dec 17 05:44 pandaJob.out
[2025-12-17 07:58:46] -rw------- 1 boinc boinc    987409 Dec 17 05:44 agis_schedconf.cvmfs.json
[2025-12-17 07:58:46] -rw------- 1 boinc boinc   1516240 Dec 17 05:44 agis_ddmendpoints.agis.ALL.json
[2025-12-17 07:58:46] drwx------ 5 boinc boinc      4096 Dec 17 05:44 pilot3
[2025-12-17 07:58:46] -rw------- 1 boinc boinc 146033883 Dec 17 07:57 HITS.47886831._011238.pool.root.1
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc       529 Dec 17 07:57 boinc_task_state.xml
[2025-12-17 07:58:46] -rw------- 1 boinc boinc      1010 Dec 17 07:57 memory_monitor_summary.json
[2025-12-17 07:58:46] -rw------- 1 boinc boinc    281642 Dec 17 07:57 log.47886831._011238.job.log.tgz.1
[2025-12-17 07:58:46] -rw------- 1 boinc boinc      7751 Dec 17 07:58 heartbeat.json
[2025-12-17 07:58:46] -rw------- 1 boinc boinc        95 Dec 17 07:58 pilot_heartbeat.json
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc        27 Dec 17 07:58 wrapper_checkpoint.txt
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      8192 Dec 17 07:58 boinc_mmap_file
[2025-12-17 07:58:46] -rw------- 1 boinc boinc      4938 Dec 17 07:58 pilotlog.txt
[2025-12-17 07:58:46] -rw------- 1 boinc boinc   1149969 Dec 17 07:58 log.47886831._011238.job.log.1
[2025-12-17 07:58:46] -rw------- 1 boinc boinc       357 Dec 17 07:58 output.list
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc       620 Dec 17 07:58 runtime_log
[2025-12-17 07:58:46] -rw------- 1 boinc boinc   1454080 Dec 17 07:58 result.tar.gz
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      8912 Dec 17 07:58 runtime_log.err
[2025-12-17 07:58:46] -rw------- 1 boinc boinc       662 Dec 17 07:58 H67KDmifbp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdHZKDmZJDiwn.diag
[2025-12-17 07:58:46] -rw-r--r-- 1 boinc boinc      7877 Dec 17 07:58 stderr.txt
[2025-12-17 07:58:46] HITS file was successfully produced:
[2025-12-17 07:58:46] -rw------- 1 boinc boinc 146033883 Dec 17 07:57 shared/HITS.pool.root.1
[2025-12-17 07:58:46]  *** Contents of shared directory: ***
[2025-12-17 07:58:46] total 329920
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc 189728486 Dec 17 05:44 ATLAS.root_0
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc    592411 Dec 17 05:44 input.tar.gz
[2025-12-17 07:58:46] -rw-r--r-- 2 boinc boinc     15847 Dec 17 05:44 start_atlas.sh
[2025-12-17 07:58:46] -rw------- 1 boinc boinc 146033883 Dec 17 07:57 HITS.pool.root.1
[2025-12-17 07:58:46] -rw------- 1 boinc boinc   1454080 Dec 17 07:58 result.tar.gz
07:58:48 (1997625): run_atlas exited; CPU time 15612.503593
07:58:48 (1997625): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN