Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:04 (864136): wrapper (7.7.26015): starting
13:39:04 (864136): wrapper: running run_atlas (--nthreads 3)
[2025-12-17 13:39:04] Arguments: --nthreads 3
[2025-12-17 13:39:04] Threads: 3
[2025-12-17 13:39:04] Checking for CVMFS
[2025-12-17 13:39:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-17 13:39:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-17 13:39:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-17 13:39:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-17 13:39:04] 2.9.2.0 3520241 5761 84844 154111 2 61 13849383 36864001 0 130560 0 4062745 99.990 209681 18765 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-17 13:39:04] CVMFS is ok
[2025-12-17 13:39:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-17 13:39:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-17 13:39:04] Further information can be found at the LHC@home message board.
[2025-12-17 13:39:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-17 13:39:04] Checking for apptainer binary...
[2025-12-17 13:39:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-17 13:39:04] Running /usr/bin/apptainer --version
[2025-12-17 13:39:04] apptainer version 1.4.1-1.1
[2025-12-17 13:39:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-17 13:39:04] thA373
[2025-12-17 13:39:04] apptainer works
[2025-12-17 13:39:04] Set ATHENA_PROC_NUMBER=3
[2025-12-17 13:39:04] Set ATHENA_CORE_NUMBER=3
[2025-12-17 13:39:04] Starting ATLAS job with PandaID=6930761664
[2025-12-17 13:39:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-17 15:04:21]  *** The last 200 lines of the pilot log: ***
[2025-12-17 15:04:21] 2025-12-17 14:03:38,867 | INFO     | [data] queue_monitor thread has finished
[2025-12-17 15:04:21] 2025-12-17 14:03:42,946 | INFO     | job.realtimelogging is not enabled
[2025-12-17 15:04:21] 2025-12-17 14:03:43,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-17 15:04:21] 2025-12-17 14:04:02,308 | INFO     | PID=867864 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-17 15:04:21] 2025-12-17 14:04:02,309 | INFO     | found 0 job(s) in 20 queues
[2025-12-17 15:04:21] 2025-12-17 14:04:02,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-17 15:04:21] 2025-12-17 14:04:02,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-17 15:04:21] 2025-12-17 14:04:15,279 | INFO     | [monitor] cgroup control has ended
[2025-12-17 15:04:21] 2025-12-17 14:04:16,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180909016896)>', '<ExcThread(monitor, started 140180266669824)>']
[2025-12-17 15:04:21] 2025-12-17 14:04:16,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-17 15:04:21] 2025-12-17 14:04:16,379 | INFO     | [monitor] control thread has ended
[2025-12-17 15:04:21] 2025-12-17 14:04:21,131 | INFO     | all workflow threads have been joined
[2025-12-17 15:04:21] 2025-12-17 14:04:21,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-17 15:04:21] 2025-12-17 14:04:21,131 | INFO     | traces error code: 0
[2025-12-17 15:04:21] 2025-12-17 14:04:21,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-17 15:04:21] 2025-12-17 14:04:21,182 [wrapper] ==== pilot stdout END ====
[2025-12-17 15:04:21] 2025-12-17 14:04:21,184 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-17 15:04:21] 2025-12-17 14:04:21,186 [wrapper] pilotpid: 867864
[2025-12-17 15:04:21] 2025-12-17 14:04:21,188 [wrapper] Pilot exit status: 0
[2025-12-17 15:04:21] 2025-12-17 14:04:21,196 [wrapper] pandaids: 6930761664
[2025-12-17 15:04:21] 2025-12-17 14:04:21,212 [wrapper] cleanup supervisor_pilot  886060 867865
[2025-12-17 15:04:21] 2025-12-17 14:04:21,214 [wrapper] Test setup, not cleaning
[2025-12-17 15:04:21] 2025-12-17 14:04:21,216 [wrapper] apfmon messages muted
[2025-12-17 15:04:21] 2025-12-17 14:04:21,219 [wrapper] ==== wrapper stdout END ====
[2025-12-17 15:04:21] 2025-12-17 14:04:21,221 [wrapper] ==== wrapper stderr END ====
[2025-12-17 15:04:21]  *** Error codes and diagnostics ***
[2025-12-17 15:04:21]     "exeErrorCode": 0,
[2025-12-17 15:04:21]     "exeErrorDiag": "",
[2025-12-17 15:04:21]     "pilotErrorCode": 0,
[2025-12-17 15:04:21]     "pilotErrorDiag": "",
[2025-12-17 15:04:21]  *** Listing of results directory ***
[2025-12-17 15:04:21] total 338092
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc    579449 Dec 16 07:04 pilot3.tar.gz
[2025-12-17 15:04:21] -rwx------ 1 boinc boinc     36322 Dec 16 07:08 runpilot2-wrapper.sh
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      5112 Dec 16 07:11 queuedata.json
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc       100 Dec 17 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-17 15:04:21] -rwxr-xr-x 1 boinc boinc      7986 Dec 17 13:39 run_atlas
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc       105 Dec 17 13:39 job.xml
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc 192132682 Dec 17 13:39 EVNT.47886829._000521.pool.root.1
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc    592419 Dec 17 13:39 input.tar.gz
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:39 start_atlas.sh
[2025-12-17 15:04:21] drwxrwx--x 2 boinc boinc      4096 Dec 17 13:39 shared
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:39 boinc_setup_complete
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      6439 Dec 17 13:39 init_data.xml
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc         0 Dec 17 13:39 boinc_lockfile
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      2539 Dec 17 13:39 pandaJob.out
[2025-12-17 15:04:21] -rw------- 1 boinc boinc    987423 Dec 17 13:39 agis_schedconf.cvmfs.json
[2025-12-17 15:04:21] -rw------- 1 boinc boinc   1516240 Dec 17 13:39 agis_ddmendpoints.agis.ALL.json
[2025-12-17 15:04:21] drwx------ 5 boinc boinc      4096 Dec 17 13:39 pilot3
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc       529 Dec 17 15:03 boinc_task_state.xml
[2025-12-17 15:04:21] -rw------- 1 boinc boinc 148201942 Dec 17 15:03 HITS.47886831._012671.pool.root.1
[2025-12-17 15:04:21] -rw------- 1 boinc boinc      1021 Dec 17 15:03 memory_monitor_summary.json
[2025-12-17 15:04:21] -rw------- 1 boinc boinc    243941 Dec 17 15:03 log.47886831._012671.job.log.tgz.1
[2025-12-17 15:04:21] -rw------- 1 boinc boinc      7754 Dec 17 15:03 heartbeat.json
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      8192 Dec 17 15:04 boinc_mmap_file
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc        27 Dec 17 15:04 wrapper_checkpoint.txt
[2025-12-17 15:04:21] -rw------- 1 boinc boinc        95 Dec 17 15:04 pilot_heartbeat.json
[2025-12-17 15:04:21] -rw------- 1 boinc boinc      4823 Dec 17 15:04 pilotlog.txt
[2025-12-17 15:04:21] -rw------- 1 boinc boinc    742081 Dec 17 15:04 log.47886831._012671.job.log.1
[2025-12-17 15:04:21] -rw------- 1 boinc boinc       357 Dec 17 15:04 output.list
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc       620 Dec 17 15:04 runtime_log
[2025-12-17 15:04:21] -rw------- 1 boinc boinc   1003520 Dec 17 15:04 result.tar.gz
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      8897 Dec 17 15:04 runtime_log.err
[2025-12-17 15:04:21] -rw------- 1 boinc boinc       658 Dec 17 15:04 6C2NDmaPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNhZKDmP2ZgNo.diag
[2025-12-17 15:04:21] -rw-r--r-- 1 boinc boinc      5008 Dec 17 15:04 stderr.txt
[2025-12-17 15:04:21] HITS file was successfully produced:
[2025-12-17 15:04:21] -rw------- 1 boinc boinc 148201942 Dec 17 15:03 shared/HITS.pool.root.1
[2025-12-17 15:04:21]  *** Contents of shared directory: ***
[2025-12-17 15:04:21] total 333948
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc 192132682 Dec 17 13:39 ATLAS.root_0
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc    592419 Dec 17 13:39 input.tar.gz
[2025-12-17 15:04:21] -rw-r--r-- 2 boinc boinc     15847 Dec 17 13:39 start_atlas.sh
[2025-12-17 15:04:21] -rw------- 1 boinc boinc 148201942 Dec 17 15:03 HITS.pool.root.1
[2025-12-17 15:04:21] -rw------- 1 boinc boinc   1003520 Dec 17 15:04 result.tar.gz
15:04:22 (864136): run_atlas exited; CPU time 14471.040804
15:04:22 (864136): called boinc_finish(0)

</stderr_txt>
]]>

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